; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g012440 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012440
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:16059955..16062895
RNA-Seq ExpressionLcy06g012440
SyntenyLcy06g012440
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5458478.1 hypothetical protein F2P56_022503 [Juglans regia]4.0e-10733.24Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------
        +TK     V+  + + GF +   V  +G SGG+  +W++  D+++ ++S  HI + I   + +  W  TGFY                            
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------

Query:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------
                   EK G   R Y QM DF EA+N C L D GY GDKFTW+  +      KER                                       
Subjt:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------

Query:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI
                                      K K +  L         +++ + +  ++ LL E++   + R++ +WLK GD+NSK+FH  A+ +R  N I
Subjt:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI

Query:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED
          L DN      S+EEI    Q +FK LF TS   P  + + +  ++A++  D    L+  FT++EVE A+  MSP  +PG DG   +FY+++W  +G++
Subjt:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED

Query:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG
             L +LN    L  +N T I LI K  +P+ ++D+RPI+LCNVMY II++ +ANRLKL+L  IISPT+   +PGR I++NV+  F+ +H +NN+ +G
Subjt:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG

Query:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS
        +   + ++LDMSKAYD++ WPFI+ V++KMGF ++  K+IM C+ T+SYS+L+N SP   F PSRG+RQGDPLSPYLF+LCAE  S LLN  E + +++ 
Subjt:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS

Query:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ
          +      + HLFFADD+L+F K+   +   +  +L  YE  S + +N+ K+S   SRN     +     I G++++ S  Q
Subjt:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ

PKA56961.1 Putative ribonuclease H protein [Apostasia shenzhenica]1.3e-10533.01Show/hide
Query:  SDTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI--TVNQWSWRFTGFY---------------------------
        S+TK   ++ D +KR C F +   V   G+SGGL +MWQ+  D++++SFS  HIDV I   V+++ WRFTGFY                           
Subjt:  SDTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI--TVNQWSWRFTGFY---------------------------

Query:  ----------DIEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKEL------------------------------
                    EK GG AR  K++  F EA+  C L D GY G  FTW   ++   A+ ER ++ +  +                              
Subjt:  ----------DIEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKEL------------------------------

Query:  -------------------------------------------------------------THGEISGS--------------------FDKIIKAKEKL
                                                                       G I  S                     D+I + ++ L
Subjt:  -------------------------------------------------------------THGEISGS--------------------FDKIIKAKEKL

Query:  ETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRR
          LL  +E   + R+R +WL+ GD N+ +FH+ A+ ++ +N I  L D++       E + +V  +YF  +F T       +I    +I  K++ D+   
Subjt:  ETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRR

Query:  LNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIAN
        L  +FTKEEVE+AL  + PSKAPG DG HA F+QK W++IGED  +  L ILN  + L  IN T I LI K      M  +RPI+LCNV Y IIA+ +AN
Subjt:  LNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIAN

Query:  RLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSP
        RLK VL +IIS  +   VP R I++N++  ++C+H +N +++G +DF  ++LDMSKAYD+V WPF+E++M  M F  +  + I+ CI T+SY+I  N S 
Subjt:  RLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSP

Query:  TDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMA
             P RGLRQGDPLSPY FL+CAEG S+L+ REE    +   R +   P +THLFFADD+L+F +A  ++  +I+K++E YE  S + IN  KS    
Subjt:  TDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMA

Query:  SRNVFIDRKRQCESILGIKNTDSL
        SRN   +++ + + +L +K   ++
Subjt:  SRNVFIDRKRQCESILGIKNTDSL

XP_018853114.2 uncharacterized protein LOC109015083 [Juglans regia]4.0e-10733.24Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------
        +TK     V+  + + GF +   V  +G SGG+  +W++  D+++ ++S  HI + I   + +  W  TGFY                            
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------

Query:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------
                   EK G   R Y QM DF EA+N C L D GY GDKFTW+  +      KER                                       
Subjt:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------

Query:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI
                                      K K +  L         +++ + +  ++ LL E++   + R++ +WLK GD+NSK+FH  A+ +R  N I
Subjt:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI

Query:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED
          L DN      S+EEI    Q +FK LF TS   P  + + +  ++A++  D    L+  FT++EVE A+  MSP  +PG DG   +FY+++W  +G++
Subjt:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED

Query:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG
             L +LN    L  +N T I LI K  +P+ ++D+RPI+LCNVMY II++ +ANRLKL+L  IISPT+   +PGR I++NV+  F+ +H +NN+ +G
Subjt:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG

Query:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS
        +   + ++LDMSKAYD++ WPFI+ V++KMGF ++  K+IM C+ T+SYS+L+N SP   F PSRG+RQGDPLSPYLF+LCAE  S LLN  E + +++ 
Subjt:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS

Query:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ
          +      + HLFFADD+L+F K+   +   +  +L  YE  S + +N+ K+S   SRN     +     I G++++ S  Q
Subjt:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.0e-11134.14Show/hide
Query:  VDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI--TVNQWSWRFTGFYD-----------------------------------
        ++ +K + GF+N L V C G+SGG+ ++W  + ++ +KS++  HID  I  T   + WR TGFY                                    
Subjt:  VDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI--TVNQWSWRFTGFYD-----------------------------------

Query:  --IEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGN----------AVKERKEKDIKELTHGEISGSFD-------------------
           EK GG  R+  QM  F + +N C   D GY G  +TW+  +   N          A  +   K +    H  +  +FD                   
Subjt:  --IEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGN----------AVKERKEKDIKELTHGEISGSFD-------------------

Query:  --------------------------------------------------------------------------------KIIKAKEKLETLLAEDEFYS
                                                                                        +I + +E++  LL ++E Y 
Subjt:  --------------------------------------------------------------------------------KIIKAKEKLETLLAEDEFYS

Query:  RIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVE
          R++  WLK GD+N+K+FHA+AS +R +N I G++D    W ++EE I   A +YF  ++ +S   P ++ +V +AI  KVTE+ N  L  +FTKEEV 
Subjt:  RIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVE

Query:  RALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIIS
         AL+ + P+KAPG DG  A+F+QKYW ++G + T + L +LNH   +  +NKT I+LI KTN+P+ M+D+RPI+LCNV+Y +I++++ANRLK +L  IIS
Subjt:  RALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIIS

Query:  PTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLR
          +      R IT+NVL  F+ +H L++K  G++ F+ I+LDMSKA+D+V W FI +VM +MGF +R R L+M+CI ++SYSILIN        PSRGLR
Subjt:  PTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLR

Query:  QGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQ
        QGDPLSP LFLLCAEG S L+N+     ++T   +N  CP +THLFFADD+++F KA  ++   ++ +L  YE  S + IN  KSS   S N   + + +
Subjt:  QGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQ

Query:  CESILG
          +ILG
Subjt:  CESILG

XP_030963869.1 uncharacterized protein LOC115985034 [Quercus lobata]6.1e-10838.47Show/hide
Query:  DTKSQGTQVDSLKRKCG-FSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI---TVNQWSWRFTGFYD-----IEKSGGPARNYKQMRDFWEA
        +TK+  +Q+   K K       L V   GKSGGL ++W+   D+ ++S+S  HID  +   +VN  +WR TGFY       +K GG  R+  QM  F  A
Subjt:  DTKSQGTQVDSLKRKCG-FSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTI---TVNQWSWRFTGFYD-----IEKSGGPARNYKQMRDFWEA

Query:  INRCNLIDAGYNGDKFTWAKNK-ANGNAVKERKEKDIKELTH-GEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNR
        ++ C+L D G+ G +FTW   +  +   +   K+  ++ L +   +      I   + ++  LL  +    + RS+  W + GD+N+++FH  AS +R +
Subjt:  INRCNLIDAGYNGDKFTWAKNK-ANGNAVKERKEKDIKELTH-GEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNR

Query:  NEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVI
        N I GL D+N  W   EE I  +  NYF  ++Q     P +   VV+A++ KVT +    L   F  +EV  AL  M P+K+PG DG   +F Q YW ++
Subjt:  NEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVI

Query:  GEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNK
        G++ T   L ILN        N T I LI KT +P+ +++YRPI+LCNV+Y ++A+V+ANRLK +L  I+S  +   V GR ITNN+L  F+ +H +  +
Subjt:  GEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNK

Query:  RKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSI
        RKG++  + I+LDMSKA+D+V W  +  VM KMGF DR   +IM CI ++SYS+LIN  P  E  PSRG+RQGDPLSP+LFLLCAEG S +L REE    
Subjt:  RKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSI

Query:  LTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILG
        +    +      L+HLFFADD++IF +A  ++   +  +L  YE  S + IN+ K+S   S+N  I  + + ++  G
Subjt:  LTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILG

TrEMBL top hitse value%identityAlignment
A0A2I4HAC4 uncharacterized protein LOC1090150831.9e-10733.24Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------
        +TK     V+  + + GF +   V  +G SGG+  +W++  D+++ ++S  HI + I   + +  W  TGFY                            
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTIT--VNQWSWRFTGFYDI--------------------------

Query:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------
                   EK G   R Y QM DF EA+N C L D GY GDKFTW+  +      KER                                       
Subjt:  -----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKER---------------------------------------

Query:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI
                                      K K +  L         +++ + +  ++ LL E++   + R++ +WLK GD+NSK+FH  A+ +R  N I
Subjt:  ------------------------------KEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEI

Query:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED
          L DN      S+EEI    Q +FK LF TS   P  + + +  ++A++  D    L+  FT++EVE A+  MSP  +PG DG   +FY+++W  +G++
Subjt:  KGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGED

Query:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG
             L +LN    L  +N T I LI K  +P+ ++D+RPI+LCNVMY II++ +ANRLKL+L  IISPT+   +PGR I++NV+  F+ +H +NN+ +G
Subjt:  TTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKG

Query:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS
        +   + ++LDMSKAYD++ WPFI+ V++KMGF ++  K+IM C+ T+SYS+L+N SP   F PSRG+RQGDPLSPYLF+LCAE  S LLN  E + +++ 
Subjt:  RDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTS

Query:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ
          +      + HLFFADD+L+F K+   +   +  +L  YE  S + +N+ K+S   SRN     +     I G++++ S  Q
Subjt:  FRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ

A0A2N9EV43 Reverse transcriptase domain-containing protein1.0e-10834.08Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVNQWS-WRFTGFYD----------------------------
        +TK    +++ ++ K GF N   V   G+SGGL ++WQN+A+I I++FS  HID  +   Q   WR TGFY                             
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVNQWS-WRFTGFYD----------------------------

Query:  ---------IEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIK-----------ELTH--GEIS-------------
                  EK GG AR+ +Q+ +F +A+N CNL+D GY G  +TW  N+ +   V+ R ++ +             +TH  G +S             
Subjt:  ---------IEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIK-----------ELTH--GEIS-------------

Query:  --------------------------------------------------------------GSFDKIIKAK------------------------EKLE
                                                                      G+ D  ++ K                        +++ 
Subjt:  --------------------------------------------------------------GSFDKIIKAK------------------------EKLE

Query:  TLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSF-PPPERLIKVVDAIQAKVTEDQNRR
         LL +DE + R RSRE WLK GD+N+K+FH KA  +R +N IKG+ D+   W E+E  IG +A  YFKE+F +S     E  ++V+D +   VT D N +
Subjt:  TLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSF-PPPERLIKVVDAIQAKVTEDQNRR

Query:  LNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIAN
        L   FT  E+++A   M PSK+PG DG  + F+QKYW ++G+D     L +L     L   N + I LI K  +P+ +SDYRPI+L NV+Y I+++V+AN
Subjt:  LNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIAN

Query:  RLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSP
        RLK VL  IIS ++   VPGRQIT+NV   F+ +H L ++RKG+   + I+LDMSKAYD+V W F+E VM +MGF  R   L+M C+RT SYS+L+N  P
Subjt:  RLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSP

Query:  TDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMA
        T   KPSRG+RQGDPLSPYLFL CAEG + LL +   +  +    +    P ++HL FADD+L+F  A   +   + +VL  YE  S + +NR K++   
Subjt:  TDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMA

Query:  SRNVFIDRKRQCESILGIK
        S+N     +   + + G++
Subjt:  SRNVFIDRKRQCESILGIK

A0A2N9GLL3 Reverse transcriptase domain-containing protein1.5e-11233.89Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVN-QWSWRFTGFY-----------------------------
        +TKS  T++ ++K   GF N L V   G+SGG+ +MW+ + D+ I+++S  HID  I  N   SWR TGFY                             
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVN-QWSWRFTGFY-----------------------------

Query:  --------DIEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKELT-------------------------------
                  EK G   R  ++M DF EA+N C LID GY G  FTW  N+     V+E  ++ +  L+                               
Subjt:  --------DIEKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKELT-------------------------------

Query:  -----------------------------------------------------------HGEISGSFDK-------------------------IIKAKE
                                                                    G++    D+                         I   K 
Subjt:  -----------------------------------------------------------HGEISGSFDK-------------------------IIKAKE

Query:  KLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQN
        ++   L  +E Y R R++  WL+ GDKN+K+FH +AS ++ +N I+GLFD++  W E++ E+  +A+ YF ELF T    P ++   +DAI+  V+ + N
Subjt:  KLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQN

Query:  RRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVI
          L   FT  EV+ AL  M PSKAPG DG    FYQ+YW ++G + T   L ILN  + LS IN T +TLI K   P+Y+ ++RPI+LCNV+Y +I++V+
Subjt:  RRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVI

Query:  ANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINS
        ANRL+ VL  +IS T+   +P R IT+N++  ++ +H +  KR G+  ++ ++LDMSKAYD+V W F+E+ M K+GF+DR   L+M C+RT SY+ILIN 
Subjt:  ANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINS

Query:  SPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSF
        +P    KP+RG+RQGDPLSPYLFL+CAEG S+LL R E    +     + + P ++HL FADD+L+ ++A P++  +I  +L+ YE  S + +NR K+S 
Subjt:  SPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSF

Query:  MASRNVFIDRKRQCESILGI
          S N     KR   S+LG+
Subjt:  MASRNVFIDRKRQCESILGI

A0A2N9H567 Reverse transcriptase domain-containing protein4.3e-10735.79Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVN-QWSWRFTGFYDIEKSGGPARN------------YKQMRD
        +T+ +   V+SL+ K G  + + V   G  GGL ++W+++  I + S S  HID+TI ++    W FTGFY     G P  +            +  M  
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVN-QWSWRFTGFYDIEKSGGPARN------------YKQMRD

Query:  ----FWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDI-----------KELTHGEISG----------------------------------S
            F  A++ C L D G+ G+KFTW   +   + V ER ++              ++ H   S                                   S
Subjt:  ----FWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDI-----------KELTHGEISG----------------------------------S

Query:  FDKIIK----------------------------AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIG
         +++I+                            A+++L  LLA +E Y + RSR  W++ GD+N+++FHA AS +R +NEI  L D N     S+ EI 
Subjt:  FDKIIK----------------------------AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIG

Query:  VVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPI
         +A+ YF+E+F TS   P+ L +V   ++ KVT   N  L   FT+EE+  A+  M P+KAPG DG +A+FYQK+W ++G D T   L        L  +
Subjt:  VVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPI

Query:  NKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKV
        N T I+LI KT  P  MS +RPI+LCNV+Y II++V+ANRLK VL+ +IS  +   VPGR IT+N+L  F+ +H L  KR+G+   + ++LDMSKAYD+V
Subjt:  NKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKV

Query:  GWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADD
         W FI  +M KMGF  +   LIM+CI+++SYSI+IN  P    KPSRG+RQGDPLSPYLFL+CAEG + LL   E    L    +    P + HLFFADD
Subjt:  GWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADD

Query:  NLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ
        +L+F +A   +  ++  +L+ YE  S + +N  K+S   S N   D +    + L   +T  LG+
Subjt:  NLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ

A0A2N9J836 Reverse transcriptase domain-containing protein2.0e-10933.87Show/hide
Query:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVNQWS-WRFTGFY---------------------DI------
        +TK    +++ ++ K GF N   V   G+SGGL ++W+  A++ I+++S  HID  +   Q   WR TGFY                     D+      
Subjt:  DTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVNQWS-WRFTGFY---------------------DI------

Query:  ----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIK-----------ELTH--GEISGSF----------
                  EK GG  R+ +Q+ +F EA+N CN +D G+ G  +TW  N+     ++ R ++ +             ++H  G +S             
Subjt:  ----------EKSGGPARNYKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIK-----------ELTH--GEISGSF----------

Query:  ----------------------DKIIK--------------------------------AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASL
                              +K+I+                                 ++++  LL +DE + R RSRE WL  GDKN+++FH KA  
Subjt:  ----------------------DKIIK--------------------------------AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASL

Query:  KRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKY
        +R +N +KGL D+N  W E E  +G +   YF+++F  S      +   V  I + VT   NR+L   FT  E+++A   M PSKAPG DG  + F+QKY
Subjt:  KRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKY

Query:  WDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHV
        W ++G+D     L ++N    L  +N + + LI K  +P+ +SDYRPI+L NV+Y I+++V+ANRLK VL  IIS ++   VPGRQIT+N+   F+ +H 
Subjt:  WDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHV

Query:  LNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREE
        L  +RKG+   + ++LDMSKAYD+V W F+E VM +MGF+ R   L+M C++T SYS+L+N  PT   KP+RG+RQGDPLSPYLFLLCAEG S LL R E
Subjt:  LNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREE

Query:  CQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNT
         +  +    +    P ++HL FADD+L+F +A   +   + +VL  YE  S + +N+ K++   S+N     +   + + G++ T
Subjt:  CQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNT

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein7.9e-2623.72Show/hide
Query:  YKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHA
        Y+ + D ++A+ R   I    N  K    ++K +     + KE + +E TH + S    +I K + +L+ +  +        SR  + +  +K  +    
Subjt:  YKQMRDFWEAINRCNLIDAGYNGDKFTWAKNKANGNAVKERKEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHA

Query:  KASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQ-AKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAM
            KR +N+I  + ++         EI    + Y+K L+       E +   +D     ++ +++   LN   T  E+   + S+   K+PG DG  A 
Subjt:  KASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQ-AKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAM

Query:  FYQKYWDVIGEDTTRICLKILN--HEEELSP---INKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNN
        FYQ+Y     E+     LK+     +E + P      ++I +     D     ++RPI+L N+   I+ +++ANR++  +  +I   +   +PG Q   N
Subjt:  FYQKYWDVIGEDTTRICLKILN--HEEELSP---INKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNN

Query:  VLAGFKCIHVLNNKRKGRD-DFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCA
        +    K I+V+ +  + +D + + I +D  KA+DK+  PF+ + + K+G      K+I       + +I++N    + F    G RQG PLSP LF +  
Subjt:  VLAGFKCIHVLNNKRKGRD-DFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCA

Query:  EGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCES
        E  +  + +E+    +   +L      L+   FADD +++ +       ++ K++  +  VS   IN  KS      N      RQ ES
Subjt:  EGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCES

P11369 LINE-1 retrotransposable element ORF2 protein2.1e-2627.6Show/hide
Query:  AKNKANGNAVKERKEKDIKELTHGEISGSFDKIIKAKEKLETL-LAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEE
        A  K   N+ K  + ++I +L  GEI+      ++ +  ++ +      F+ +I   ++ L    + +K    K  + + RNE KG    +       EE
Subjt:  AKNKANGNAVKERKEKDIKELTHGEISGSFDKIIKAKEKLETL-LAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEE

Query:  IGVVAQNYFKELFQTSFPPPERLIKVVDAIQA-KVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEEL
        I    ++++K L+ T     + + K +D  Q  K+ +DQ   LN   + +E+E  + S+   K+PG DG  A FYQ +     ED   I  K+  H+ E+
Subjt:  IGVVAQNYFKELFQTSFPPPERLIKVVDAIQA-KVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEEL

Query:  -----SPINKTLITLILK-TNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIEL
             +   +  ITLI K   DP  + ++RPI+L N+   I+ +++ANR++  +  II P +   +PG Q   N+      IH + NK K ++  I I L
Subjt:  -----SPINKTLITLILK-TNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIEL

Query:  DMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREE
        D  KA+DK+  PF+ +V+ + G       +I         +I +N    +      G RQG PLSPYLF +  E  +  + +++
Subjt:  DMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREE

P14381 Transposon TX1 uncharacterized 149 kDa protein4.5e-3728.76Show/hide
Query:  NAVKERKEKDIKELTHGEISGSFDKIIKAK--EKLETLLAEDEFYSR---IRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGV
        NA  E    ++ +L    +SGS D+ ++ +  E+ E L   ++  +R   +RSR + L   D+ S++F+A    K NR +I  LF  +   +E  E I  
Subjt:  NAVKERKEKDIKELTHGEISGSFDKIIKAK--EKLETLLAEDEFYSR---IRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGV

Query:  VAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPIN
         A+++++ LF      P+   ++ D +   V+E +  RL    T +E+ +ALR M  +K+PGLDG    F+Q +WD +G D  R+  +     E      
Subjt:  VAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPIN

Query:  KTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVG
        + +++L+ K  D R + ++RP++L +  Y I+A+ I+ RLK VL  +I P +   VPGR I +NV   F    +L+  R+       + LD  KA+D+V 
Subjt:  KTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVG

Query:  WPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDN
          ++   +    F  +    +     +    + IN S T      RG+RQG PLS  L+ L  E F  LL +      LT   L      +    +ADD 
Subjt:  WPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDN

Query:  LIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFID
        ++ ++    D    ++  E Y   S   IN SKSS +   ++ +D
Subjt:  LIFSKAYPKDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFID

P92555 Uncharacterized mitochondrial protein AtMg012507.7e-1344.94Show/hide
Query:  LINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNL------IFSKAYPKDFLSIK
        +IN +P     PSRGLRQGDPLSPYLF+LC E  S L  R + Q  L   R++N  P + HL FADD        + ++ +P  FLS++
Subjt:  LINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNL------IFSKAYPKDFLSIK

Q03274 Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment)2.7e-1024.35Show/hide
Query:  KEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKI----LNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRL
        +EE++ A++   PS APG DG       +         TR+        L      +P      TLI K  D    S++RPI + + +  ++  ++A RL
Subjt:  KEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKI----LNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRL

Query:  KLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILIN-SSPT
        +  ++   +   +  + G  + + +L  +     ++++R+ R  +  + LD+ KA+D V    I   + ++G  + +   I   +   + +I +   S T
Subjt:  KLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSDRSRKLIMRCIRTISYSILIN-SSPT

Query:  DEFKPSRGLRQGDPLSPYLF------LLCA
         +    RG++QGDPLSP+LF      LLC+
Subjt:  DEFKPSRGLRQGDPLSPYLF------LLCA

Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein3.8e-1527.09Show/hide
Query:  AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELF--QTSFPPPERLIKVVDAIQAKV
        A++K     A  E + R +SR +WL+ GD N+++FH      + +N IK L  ++   VE+  ++  +   Y+  L    +    P+ + ++ D    + 
Subjt:  AKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVESEEEIGVVAQNYFKELF--QTSFPPPERLIKVVDAIQAKV

Query:  TEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTI
         +    RL+   + +E+  A+ +M  +KAPG D   A F+ + W V+ + T     +       L   N T ITLI K      +S +RP++ C V+Y I
Subjt:  TEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSPINKTLITLILKTNDPRYMSDYRPINLCNVMYTI

Query:  IAE
        I +
Subjt:  IAE

AT4G20520.1 RNA binding;RNA-directed DNA polymerases5.9e-0830Show/hide
Query:  IANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSD
        +  RLK ++  +I P +   +PGR  T+N++   + +H +  K KG   ++ ++LD+ KAYD++ W ++E+ +   GF +
Subjt:  IANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPFIEEVMAKMGFSD

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)5.5e-1444.94Show/hide
Query:  LINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNL------IFSKAYPKDFLSIK
        +IN +P     PSRGLRQGDPLSPYLF+LC E  S L  R + Q  L   R++N  P + HL FADD        + ++ +P  FLS++
Subjt:  LINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNL------IFSKAYPKDFLSIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAGCTAAGTCTGACACAAAGAGCCAAGGAACTCAAGTTGATAGCTTAAAGAGGAAATGTGGCTTTAGCAACGACCTGAGAGTGGGATGTAAAGGGAAA
AGTGGCGGGCTGATTATGATGTGGCAAAATCAGGCTGATATTTCCATTAAATCTTTCTCTCCGGGTCATATTGATGTAACGATTACAGTTAATCAGTGGTCTTGG
AGGTTCACCGGCTTTTATGACATCGAAAAGAGTGGAGGCCCAGCTAGAAATTATAAGCAAATGAGGGACTTCTGGGAAGCTATTAATAGATGCAATCTCATTGAT
GCTGGTTACAATGGGGACAAATTCACTTGGGCAAAAAACAAGGCCAACGGTAATGCTGTGAAAGAAAGGAAGGAAAAGGATATTAAAGAGTTGACCCATGGGGAA
ATTAGCGGTAGTTTCGACAAGATCATTAAAGCTAAAGAAAAATTGGAAACTCTCCTAGCAGAAGATGAGTTCTATTCGAGAATTAGATCTCGAGAAGAATGGCTA
AAAGGAGGAGATAAAAACTCCAAATGGTTTCACGCAAAAGCTAGTTTGAAAAGGAATAGAAATGAGATCAAAGGCCTTTTTGATAATAATAGCTGTTGGGTTGAA
TCAGAGGAGGAAATAGGGGTGGTGGCTCAAAACTATTTTAAGGAGTTGTTTCAAACAAGCTTCCCACCTCCCGAGAGGCTCATTAAGGTGGTCGATGCTATCCAA
GCAAAAGTGACTGAGGACCAGAATAGAAGGTTGAACATTGACTTCACCAAGGAGGAAGTCGAAAGAGCCCTCAGGAGCATGAGTCCCTCCAAAGCCCCAGGTCTT
GATGGGGCCCATGCTATGTTTTATCAGAAATATTGGGACGTGATAGGGGAGGATACTACTAGGATTTGTCTCAAAATCCTTAATCATGAAGAAGAGCTCAGCCCT
ATCAACAAGACCTTAATCACCCTCATCCTCAAGACCAATGATCCAAGGTACATGAGCGATTACAGACCGATCAACTTATGCAATGTGATGTATACGATTATTGCT
GAGGTGATAGCGAATAGATTGAAGCTCGTTCTGGACACTATTATCTCGCCCACTAAATTTGTCATTGTCCCTGGGAGACAAATCACTAACAATGTATTGGCGGGG
TTCAAATGCATTCACGTCCTGAATAACAAAAGAAAAGGGAGAGACGACTTCATCACGATTGAGCTCGACATGAGCAAAGCTTATGACAAAGTGGGGTGGCCTTTC
ATTGAGGAAGTCATGGCCAAAATGGGGTTCAGTGATCGATCGAGAAAGCTCATTATGAGGTGTATCAGGACAATTAGCTACTCGATTCTGATCAATAGCTCGCCG
ACAGACGAATTCAAGCCTAGTAGGGGGCTTCGGCAAGGGGACCCCCTCTCCCCCTACCTTTTCCTCCTTTGTGCAGAAGGCTTCTCGACTCTGCTAAATAGGGAA
GAATGTCAATCTATCTTAACTAGTTTTCGCTTGAATAATTTCTGTCCACCTCTAACCCATCTCTTTTTTGCAGATGACAACTTAATCTTTTCAAAGGCTTACCCA
AAAGACTTTTTATCAATCAAGAAGGTGCTGGAATGGTATGAATTGGTCTCGAGGAAAACCATCAATAGAAGCAAATCCTCCTTTATGGCGAGCCGAAATGTGTTC
ATTGATCGCAAGAGGCAATGTGAAAGTATCTTGGGCATTAAGAATACAGATTCCTTGGGGCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGCTAAGTCTGACACAAAGAGCCAAGGAACTCAAGTTGATAGCTTAAAGAGGAAATGTGGCTTTAGCAACGACCTGAGAGTGGGATGTAAAGGGAAA
AGTGGCGGGCTGATTATGATGTGGCAAAATCAGGCTGATATTTCCATTAAATCTTTCTCTCCGGGTCATATTGATGTAACGATTACAGTTAATCAGTGGTCTTGG
AGGTTCACCGGCTTTTATGACATCGAAAAGAGTGGAGGCCCAGCTAGAAATTATAAGCAAATGAGGGACTTCTGGGAAGCTATTAATAGATGCAATCTCATTGAT
GCTGGTTACAATGGGGACAAATTCACTTGGGCAAAAAACAAGGCCAACGGTAATGCTGTGAAAGAAAGGAAGGAAAAGGATATTAAAGAGTTGACCCATGGGGAA
ATTAGCGGTAGTTTCGACAAGATCATTAAAGCTAAAGAAAAATTGGAAACTCTCCTAGCAGAAGATGAGTTCTATTCGAGAATTAGATCTCGAGAAGAATGGCTA
AAAGGAGGAGATAAAAACTCCAAATGGTTTCACGCAAAAGCTAGTTTGAAAAGGAATAGAAATGAGATCAAAGGCCTTTTTGATAATAATAGCTGTTGGGTTGAA
TCAGAGGAGGAAATAGGGGTGGTGGCTCAAAACTATTTTAAGGAGTTGTTTCAAACAAGCTTCCCACCTCCCGAGAGGCTCATTAAGGTGGTCGATGCTATCCAA
GCAAAAGTGACTGAGGACCAGAATAGAAGGTTGAACATTGACTTCACCAAGGAGGAAGTCGAAAGAGCCCTCAGGAGCATGAGTCCCTCCAAAGCCCCAGGTCTT
GATGGGGCCCATGCTATGTTTTATCAGAAATATTGGGACGTGATAGGGGAGGATACTACTAGGATTTGTCTCAAAATCCTTAATCATGAAGAAGAGCTCAGCCCT
ATCAACAAGACCTTAATCACCCTCATCCTCAAGACCAATGATCCAAGGTACATGAGCGATTACAGACCGATCAACTTATGCAATGTGATGTATACGATTATTGCT
GAGGTGATAGCGAATAGATTGAAGCTCGTTCTGGACACTATTATCTCGCCCACTAAATTTGTCATTGTCCCTGGGAGACAAATCACTAACAATGTATTGGCGGGG
TTCAAATGCATTCACGTCCTGAATAACAAAAGAAAAGGGAGAGACGACTTCATCACGATTGAGCTCGACATGAGCAAAGCTTATGACAAAGTGGGGTGGCCTTTC
ATTGAGGAAGTCATGGCCAAAATGGGGTTCAGTGATCGATCGAGAAAGCTCATTATGAGGTGTATCAGGACAATTAGCTACTCGATTCTGATCAATAGCTCGCCG
ACAGACGAATTCAAGCCTAGTAGGGGGCTTCGGCAAGGGGACCCCCTCTCCCCCTACCTTTTCCTCCTTTGTGCAGAAGGCTTCTCGACTCTGCTAAATAGGGAA
GAATGTCAATCTATCTTAACTAGTTTTCGCTTGAATAATTTCTGTCCACCTCTAACCCATCTCTTTTTTGCAGATGACAACTTAATCTTTTCAAAGGCTTACCCA
AAAGACTTTTTATCAATCAAGAAGGTGCTGGAATGGTATGAATTGGTCTCGAGGAAAACCATCAATAGAAGCAAATCCTCCTTTATGGCGAGCCGAAATGTGTTC
ATTGATCGCAAGAGGCAATGTGAAAGTATCTTGGGCATTAAGAATACAGATTCCTTGGGGCAATAA
Protein sequenceShow/hide protein sequence
MGGAKSDTKSQGTQVDSLKRKCGFSNDLRVGCKGKSGGLIMMWQNQADISIKSFSPGHIDVTITVNQWSWRFTGFYDIEKSGGPARNYKQMRDFWEAINRCNLID
AGYNGDKFTWAKNKANGNAVKERKEKDIKELTHGEISGSFDKIIKAKEKLETLLAEDEFYSRIRSREEWLKGGDKNSKWFHAKASLKRNRNEIKGLFDNNSCWVE
SEEEIGVVAQNYFKELFQTSFPPPERLIKVVDAIQAKVTEDQNRRLNIDFTKEEVERALRSMSPSKAPGLDGAHAMFYQKYWDVIGEDTTRICLKILNHEEELSP
INKTLITLILKTNDPRYMSDYRPINLCNVMYTIIAEVIANRLKLVLDTIISPTKFVIVPGRQITNNVLAGFKCIHVLNNKRKGRDDFITIELDMSKAYDKVGWPF
IEEVMAKMGFSDRSRKLIMRCIRTISYSILINSSPTDEFKPSRGLRQGDPLSPYLFLLCAEGFSTLLNREECQSILTSFRLNNFCPPLTHLFFADDNLIFSKAYP
KDFLSIKKVLEWYELVSRKTINRSKSSFMASRNVFIDRKRQCESILGIKNTDSLGQ