CuGenDBv2

Gene ID	Lcy06g012460
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reverse transcriptase domain-containing protein
Genome location	Chr06:16069169..16070161
RNA-Seq Expression	Lcy06g012460
Synteny	Lcy06g012460
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]

3.3e-74

44.12

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRWR+G+G SI+VY   WLP   C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D LIWH+E N  ++VKSGYR+  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI

Query:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN
          +W  V  FRE  LW  L      EE  +F    W  WN
Subjt:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]

3.4e-71

45.92

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        +RWR+G+G SI+VY   WLP   C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D LIWH+E N  ++VKSGYR+ +
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+       F++F
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]

2.0e-71

43.28

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Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRWR+GNG SI+VY   WLP      + SP  LP+   VCDLFT  G W+V  + + F  +E D    IP+  L G D LIWH+E N  ++VKSGYR+  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI

Query:  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN
        +S   LW  +Q        GE + L  +L W  WN
Subjt:  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN

XP_015382226.1 uncharacterized protein LOC107175329, partial [Citrus sinensis]

5.1e-67

37.39

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Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        +ARFWW  +   RGIHW KW+ LC+ K  GG+GF+D   FNQAL+AKQ W I+  P SL+++VLK++YF    F++A +   PSF+W S++WG +I+QKG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRW++G+G  + +Y   WLP  +     SP +L + A V DL  +   W  +  + HF+ E+A +I  I +P    PD+ +WH++   K++VKSGY++  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLIS
               P +S+  S LS W   W  ++  KIKI MW+   N LPT  NL  R +    IC+ CG   +D IH    CK A++ W  +  +  +   +  
Subjt:  IPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLIS

Query:  SLWLMVQEFREERLWGELEELSIFLWAFW
         L  ++ E + ++   ELE + +  W  W
Subjt:  SLWLMVQEFREERLWGELEELSIFLWAFW

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

4.4e-87

46.69

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Query:  ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGL
        ARFWW  +   + IHWV W  L  PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS+VLK RYF  C F++A +  NPS+IW S++WG ++L+KGL
Subjt:  ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGL

Query:  RWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQ
        RWR+GNG S+ +Y   W+P +    + S   LP+ +RV  L   + GGW    + + F P+EA  I SIPI      DRLIW++E    ++V+SGY+V  
Subjt:  RWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQ

Query:  I--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL
        +  P +Q  PS+S+   +  WW  FWKM I  KIK+ +W+LCL+RLPT  NL  RG+++ N C FCGR G+D IH+F +CKFA   W  SKF        
Subjt:  I--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL

Query:  ISSLWLMVQEFREERLWGELEELSIFLWAFWN
          S +L+++E  E     + EEL + +W  WN
Subjt:  ISSLWLMVQEFREERLWGELEELSIFLWAFWN

TrEMBL top hits

e value

%identity

Alignment

A0A251NPF0 Reverse transcriptase domain-containing protein

1.6e-74

44.12

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRWR+G+G SI+VY   WLP   C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D LIWH+E N  ++VKSGYR+  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI

Query:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN
          +W  V  FRE  LW  L      EE  +F    W  WN
Subjt:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN

A0A5E4FZN9 PREDICTED: retrotransposon

9.6e-72

43.28

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRWR+GNG SI+VY   WLP      + SP  LP+   VCDLFT  G W+V  + + F  +E D    IP+  L G D LIWH+E N  ++VKSGYR+  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI

Query:  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN
        +S   LW  +Q        GE + L  +L W  WN
Subjt:  SS---LWLMVQEFREERLWGELEELSIFL-WAFWN

A0A6J1DAR4 uncharacterized protein LOC111018954

2.1e-87

46.69

Show/hide

Query:  ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGL
        ARFWW  +   + IHWV W  L  PKC GG+GF+DLELFN+ALLAKQCW ILN P+S+LS+VLK RYF  C F++A +  NPS+IW S++WG ++L+KGL
Subjt:  ARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGL

Query:  RWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQ
        RWR+GNG S+ +Y   W+P +    + S   LP+ +RV  L   + GGW    + + F P+EA  I SIPI      DRLIW++E    ++V+SGY+V  
Subjt:  RWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFT-DFGGWDVQAIHNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQ

Query:  I--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL
        +  P +Q  PS+S+   +  WW  FWKM I  KIK+ +W+LCL+RLPT  NL  RG+++ N C FCGR G+D IH+F +CKFA   W  SKF        
Subjt:  I--PTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCL

Query:  ISSLWLMVQEFREERLWGELEELSIFLWAFWN
          S +L+++E  E     + EEL + +W  WN
Subjt:  ISSLWLMVQEFREERLWGELEELSIFLWAFWN

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)

1.6e-74

44.12

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        LRWR+G+G SI+VY   WLP   C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D LIWH+E N  ++VKSGYR+  
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+  W  S + +      +
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLI

Query:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN
          +W  V  FRE  LW  L      EE  +F    W  WN
Subjt:  SSLWLMVQEFREERLWGEL------EELSIF---LWAFWN

M5WJW2 Reverse transcriptase domain-containing protein

1.6e-71

45.92

Show/hide

Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        MARFWW +    RGIHWVKW+ LC+ K  GGLGF+DLE FNQALLAKQCW IL  P SL++++ ++RY P   FL+A V  NPSFIW SL WG E+L KG
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ
        +RWR+G+G SI+VY   WLP   C  + SP  LP+  RVCDLFT  G W+V  + + F  +E D I  IP+  L G D LIWH+E N  ++VKSGYR+ +
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL-GPDRLIWHFEANEKFTVKSGYRVGQ

Query:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF
        +   +     S  V L S +WK  W ++I  KIK  +W+   + LP    L  R +    IC  C R  +  +H   +C+ A+       F++F
Subjt:  IPTLQRYPSTSNFVSLLS-WWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSF

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

8.0e-23

25.88

Show/hide

Query:  FWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYF--PHCDFLDATVRHNPSFIWCSLVWGW-EILQKG
        F W  T   +  H VKW  +C PK  GGLG +  +  N+AL++K  W +L E +SL + VL+ +Y      D      + + S  W S+  G  +++  G
Subjt:  FWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYF--PHCDFLDATVRHNPSFIWCSLVWGW-EILQKG

Query:  LRWRLGNGQSIRVYNMPWL---PLEDCPLVKSPVSLPVDARVC-DLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL--GPDRLIWHFEANEKFTVKSG
        + W  G+GQ IR +   W+   PL +    + P     D  V  DL+    GWD   I  +        + ++ +  +    DRL W F  + +F+V+S 
Subjt:  LRWRLGNGQSIRVYNMPWL---PLEDCPLVKSPVSLPVDARVC-DLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPL--GPDRLIWHFEANEKFTVKSG

Query:  YRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWA----QSKFS
        Y +  +  + R P+ ++F + L      WK+++  ++K  +W +    + T      R L   N+CQ C    +  +HV R C      W     Q +  
Subjt:  YRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWA----QSKFS

Query:  SFLNHCLISSLW--LMVQEFREERLWGELEELSIFLWAFW
         F +  L   L+  L  +   E+  W  +   ++ +W  W
Subjt:  SFLNHCLISSLW--LMVQEFREERLWGELEELSIFLWAFW

P93295 Uncharacterized mitochondrial protein AtMg00310

5.3e-27

44.09

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Query:  MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQK
        M  FWW+  +  R I WV W+ LC+ K   GGLGF+DL  FNQALLAKQ + I+++P +LLS++L+SRYFPH   ++ +V   PS+ W S++ G E+L +
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQK

Query:  GLRWRLGNGQSIRVYNMPWLPLEDCPL
        GL   +G+G   +V+   W+ +++ PL
Subjt:  GLRWRLGNGQSIRVYNMPWLPLEDCPL

Arabidopsis top hits

e value

%identity

Alignment

AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

4.5e-05

27.12

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Query:  FSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRY
        FSI +P L  +  ++ +   +K    +G+   +     R  S      ++SW K+ W    + K    MW   L+RLPT   L   G+ +   C  C   
Subjt:  FSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRY

Query:  GKDDIHVFRMCKFARRQW
         +D  H+F  C+FA   W
Subjt:  GKDDIHVFRMCKFARRQW

AT3G09510.1 Ribonuclease H-like superfamily protein

1.1e-19

27.94

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Query:  LKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIR------VYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGG---WDVQAI
        +K+RYF     LDA VR   S+ W SL+ G  +L+KG R  +G+GQ+IR      V + P  PL      K       +  + +LF   G    WD   I
Subjt:  LKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQSIR------VYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGG---WDVQAI

Query:  HNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRG
               +   I  I +     PD++IW++    ++TV+SGY +         P+ +     +      W + I  K+K  +W+     L T   L  RG
Subjt:  HNHFLPEEADLIFSIPI-PPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRG

Query:  LDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLISS
        + +   C  C R  +   H    C FA   W  S  SS + + L+S+
Subjt:  LDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLISS

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

7.7e-05

34.33

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Query:  SWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQ
        +W    W ++IS KIK+L+W+   N LP    LL R + +   C  C R  +   H+   C FA+R+
Subjt:  SWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQ

AT4G29090.1 Ribonuclease H-like superfamily protein

7.8e-42

34.56

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Query:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG
        +A FWW      +G+HW  W  L   K  GG+GFKD+E FN ALL KQ W +L+ P SL+++V KSRYF   D L+A +   PSF+W S+    EIL++G
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKG

Query:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVD--------ARVCDLFTDFG-GWDVQAIHNHFLPEEADLIFSI-PIPPLGPDRLIWHFEANEKFT
         R  +GNG+ I ++   WL  +          +P           +V DL  + G  W    I   F   E  LI  + P      D   W + ++  +T
Subjt:  LRWRLGNGQSIRVYNMPWLPLEDCPLVKSPVSLPVD--------ARVCDLFTDFG-GWDVQAIHNHFLPEEADLIFSI-PIPPLGPDRLIWHFEANEKFT

Query:  VKSGYRV-GQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQS
        VKSGY V  QI   +  P   +  SL   ++  WK Q S KI+  +W+   N LP    L  R L   + C  C    +   H+   C FAR  WA S
Subjt:  VKSGYRV-GQIPTLQRYPSTSNFVSLLSWWKSFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQS

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

3.8e-28

44.09

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Query:  MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQK
        M  FWW+  +  R I WV W+ LC+ K   GGLGF+DL  FNQALLAKQ + I+++P +LLS++L+SRYFPH   ++ +V   PS+ W S++ G E+L +
Subjt:  MARFWWNETDGGRGIHWVKWKDLCRPK-CLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQK

Query:  GLRWRLGNGQSIRVYNMPWLPLEDCPL
        GL   +G+G   +V+   W+ +++ PL
Subjt:  GLRWRLGNGQSIRVYNMPWLPLEDCPL

Sequences

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CDS sequence

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ATGGCGCGGTTTTGGTGGAATGAAACAGATGGTGGTAGAGGAATTCATTGGGTTAAATGGAAGGATTTGTGTAGGCCAAAGTGCTTGGGAGGGTTGGGTTTTAAGGATCT
TGAATTGTTTAATCAAGCTCTTCTGGCTAAGCAATGTTGGAGTATTTTAAATGAGCCTTCATCGTTGTTATCACAAGTACTTAAGAGTCGCTATTTCCCTCATTGTGATT
TTCTAGATGCAACAGTGAGGCATAACCCTTCTTTTATCTGGTGCAGTTTAGTTTGGGGATGGGAAATTTTGCAGAAGGGTCTCCGTTGGCGTCTGGGGAACGGTCAATCA
ATTCGGGTTTACAACATGCCCTGGCTGCCACTAGAAGATTGTCCCCTTGTAAAATCTCCTGTTTCCCTACCTGTTGATGCGCGGGTCTGTGACCTTTTTACGGATTTTGG
GGGTTGGGATGTGCAGGCTATACATAACCATTTTCTTCCTGAGGAAGCAGATCTCATTTTTTCGATTCCTATCCCTCCTTTGGGCCCAGACCGACTTATTTGGCATTTTG
AGGCTAACGAGAAATTTACAGTCAAGAGTGGTTATCGAGTGGGCCAAATTCCGACTCTTCAACGATACCCTTCTACTTCAAATTTTGTTTCATTATTGTCTTGGTGGAAG
AGTTTCTGGAAGATGCAAATCTCAGGGAAGATTAAGATCTTAATGTGGCAGTTGTGTCTGAATCGACTACCAACTCTCTTTAATCTTCTGTGCAGAGGTTTAGATGTTCC
CAATATCTGTCAGTTCTGTGGACGGTATGGGAAAGACGACATTCATGTTTTTCGGATGTGTAAATTTGCTCGACGACAGTGGGCTCAATCAAAATTCTCTTCTTTCCTCA
ATCACTGTCTGATCTCTTCGTTATGGCTAATGGTTCAAGAGTTTCGGGAAGAACGATTGTGGGGGGAGTTGGAAGAGCTGTCGATTTTCCTATGGGCTTTCTGGAACGCT
TGA

mRNA sequence

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Protein sequence

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MARFWWNETDGGRGIHWVKWKDLCRPKCLGGLGFKDLELFNQALLAKQCWSILNEPSSLLSQVLKSRYFPHCDFLDATVRHNPSFIWCSLVWGWEILQKGLRWRLGNGQS
IRVYNMPWLPLEDCPLVKSPVSLPVDARVCDLFTDFGGWDVQAIHNHFLPEEADLIFSIPIPPLGPDRLIWHFEANEKFTVKSGYRVGQIPTLQRYPSTSNFVSLLSWWK
SFWKMQISGKIKILMWQLCLNRLPTLFNLLCRGLDVPNICQFCGRYGKDDIHVFRMCKFARRQWAQSKFSSFLNHCLISSLWLMVQEFREERLWGELEELSIFLWAFWNA

Lcy06g012460 (gene) of Sponge gourd (P93075) v1 genome