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Lcy06g012590 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012590
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr06:16539101..16543788
RNA-Seq ExpressionLcy06g012590
SyntenyLcy06g012590
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQQ10307.1 uncharacterized protein Pyn_17609 [Prunus yedoensis var. nudiflora]8.8e-1332.56Show/hide
Query:  KVDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        +V++  ++  G+ L +SLVGK+F     + E  ++     WN    ++V+ LG N FLF    E +R  +L  GPW FDK L+ L  P   V PS +   
Subjt:  KVDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIG
        +  FW+  + +P+     +M   +GNS+G
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIG

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.4e-1838.17Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNI-LNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        +D  A+E TGK L +SL+ KL + R +S  V++   K AW +      V+ +G N FLF+ +   +R+ IL  GPW FD+ L+ +  P+ + KP  ++F 
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNI-LNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF
        +V+ WVHF+ L +   N++M   LGN+IG+F
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]1.1e-2043.08Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH
        VD  AV++  + L  SLVGKL A RI+S +V+ +    AW + + L VE +G N FLF    E + + ++  GPW FDK L+ L KP      S +EF  
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH

Query:  VAFWVHFYILPMDFYNQSMVECLGNSIGIF
        VAFW+H + LPM + N++M   LGN+IG F
Subjt:  VAFWVHFYILPMDFYNQSMVECLGNSIGIF

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]3.8e-1638.17Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLI-VEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        VD  A   TG  L   LVGKLF  R ++  VM+   + AW + N    V+ LG N FLFS     +R+ I   GPW FD+ L+ + KP+ ++ PS ++F 
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLI-VEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF
         +  WV F+ LP+    + M   LGN++G F
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]3.9e-1338.02Show/hide
Query:  GKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYHVAFWVHFYI
        GKS  + LVGKL   R  + E M+    + W    G+ V  +G N F+F      ++  +L+ GPW FDK LL L +  P V+PS I+   V FWVH   
Subjt:  GKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYHVAFWVHFYI

Query:  LPMDFYNQSMVECLGNSIGIF
        LP+   N+ + E +GN++G F
Subjt:  LPMDFYNQSMVECLGNSIGIF

TrEMBL top hitse value%identityAlignment
A0A314YVX1 CCHC-type domain-containing protein4.2e-1332.56Show/hide
Query:  KVDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        +V++  ++  G+ L +SLVGK+F     + E  ++     WN    ++V+ LG N FLF    E +R  +L  GPW FDK L+ L  P   V PS +   
Subjt:  KVDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIG
        +  FW+  + +P+     +M   +GNS+G
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIG

A0A6J1BSZ1 uncharacterized protein LOC1110054816.8e-1938.17Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNI-LNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        +D  A+E TGK L +SL+ KL + R +S  V++   K AW +      V+ +G N FLF+ +   +R+ IL  GPW FD+ L+ +  P+ + KP  ++F 
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNI-LNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF
        +V+ WVHF+ L +   N++M   LGN+IG+F
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF

A0A6J1DU55 uncharacterized protein LOC1110231355.5e-2143.08Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH
        VD  AV++  + L  SLVGKL A RI+S +V+ +    AW + + L VE +G N FLF    E + + ++  GPW FDK L+ L KP      S +EF  
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH

Query:  VAFWVHFYILPMDFYNQSMVECLGNSIGIF
        VAFW+H + LPM + N++M   LGN+IG F
Subjt:  VAFWVHFYILPMDFYNQSMVECLGNSIGIF

A0A6J1DX30 uncharacterized protein LOC1110248741.8e-1638.17Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLI-VEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY
        VD  A   TG  L   LVGKLF  R ++  VM+   + AW + N    V+ LG N FLFS     +R+ I   GPW FD+ L+ + KP+ ++ PS ++F 
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLI-VEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFY

Query:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF
         +  WV F+ LP+    + M   LGN++G F
Subjt:  HVAFWVHFYILPMDFYNQSMVECLGNSIGIF

A0A6J1DYG3 uncharacterized protein LOC1110246762.1e-1229.69Show/hide
Query:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH
        VD Q   +T +++ +  VGKL   + +S + +    K  W I     +E  G N ++ +     E+  +L+ GPW FDK L  L  P    KP  ++F  
Subjt:  VDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYH

Query:  VAFWVHFYILPMDFYNQSMVECLGNSIG
         AFWV  + +P ++  + M + LG+ +G
Subjt:  VAFWVHFYILPMDFYNQSMVECLGNSIG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein3.8e-0629.89Show/hide
Query:  ILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYHVAFWVHFYILPMDFYNQSMVECLGNSIG
        +++G I+E     +F F   LEE    +L +GPW F+ +++ L +  P +      F  + FWV    +P  F N+ +VE +G ++G
Subjt:  ILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYHVAFWVHFYILPMDFYNQSMVECLGNSIG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCACTCCCTGCAGTAACGCAATTTTCATGGATGAACCGTGTCGCCGCTGGAAACCGCTCCTTCGCCGCAGCCATTAACCCACAAACCACCAACCACCGCGTC
GCCGTCATCTCCTTCTCCCTCTCCTTCGTTCCAAATCGGGCTGAAACGATCCCATGGGACTGGGATAGTTCCAGATCTGAAACAAAGGGGGAAAACCCCCTTCGT
TCAAGTCCTAGATCTGGACTTCATGTTTCTGTCGCCGGCCGCCCAGTAACGACTTCCTGCTATTCGCCACTCCCCATGCGAACTCGACCAGCTCTGAGGAAGAAG
AAGGTGGATCGACAAGCGGTTGAGATTACTGGAAAGTCTTTGGGCGTAAGTTTGGTTGGTAAGTTGTTTGCTCCTAGGATTTTATCGGGAGAGGTTATGCGTAAG
AATTTCAAAGCTGCTTGGAATATTCTGAATGGGCTTATTGTTGAAAAGCTTGGAGCTAATCGTTTTCTTTTCTCGTTACATTTGGAGGAAGAACGAAGTTGTATT
CTTAATCAAGGACCATGGTTGTTCGATAAATTCTTATTGGCGTTAGCCAAACCCATTCCAATGGTCAAGCCATCAACGATTGAGTTTTATCATGTTGCTTTTTGG
GTTCATTTCTATATACTACCAATGGACTTTTACAACCAATCAATGGTTGAATGTTTGGGCAATTCCATTGGGATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCACTCCCTGCAGTAACGCAATTTTCATGGATGAACCGTGTCGCCGCTGGAAACCGCTCCTTCGCCGCAGCCATTAACCCACAAACCACCAACCACCGCGTC
GCCGTCATCTCCTTCTCCCTCTCCTTCGTTCCAAATCGGGCTGAAACGATCCCATGGGACTGGGATAGTTCCAGATCTGAAACAAAGGGGGAAAACCCCCTTCGT
TCAAGTCCTAGATCTGGACTTCATGTTTCTGTCGCCGGCCGCCCAGTAACGACTTCCTGCTATTCGCCACTCCCCATGCGAACTCGACCAGCTCTGAGGAAGAAG
AAGGTGGATCGACAAGCGGTTGAGATTACTGGAAAGTCTTTGGGCGTAAGTTTGGTTGGTAAGTTGTTTGCTCCTAGGATTTTATCGGGAGAGGTTATGCGTAAG
AATTTCAAAGCTGCTTGGAATATTCTGAATGGGCTTATTGTTGAAAAGCTTGGAGCTAATCGTTTTCTTTTCTCGTTACATTTGGAGGAAGAACGAAGTTGTATT
CTTAATCAAGGACCATGGTTGTTCGATAAATTCTTATTGGCGTTAGCCAAACCCATTCCAATGGTCAAGCCATCAACGATTGAGTTTTATCATGTTGCTTTTTGG
GTTCATTTCTATATACTACCAATGGACTTTTACAACCAATCAATGGTTGAATGTTTGGGCAATTCCATTGGGATTTTTTAA
Protein sequenceShow/hide protein sequence
MPLPAVTQFSWMNRVAAGNRSFAAAINPQTTNHRVAVISFSLSFVPNRAETIPWDWDSSRSETKGENPLRSSPRSGLHVSVAGRPVTTSCYSPLPMRTRPALRKK
KVDRQAVEITGKSLGVSLVGKLFAPRILSGEVMRKNFKAAWNILNGLIVEKLGANRFLFSLHLEEERSCILNQGPWLFDKFLLALAKPIPMVKPSTIEFYHVAFW
VHFYILPMDFYNQSMVECLGNSIGIF