| GenBank top hits | e value | %identity | Alignment |
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| KAA3462946.1 non-ltr retroelement reverse transcriptase [Gossypium australe] | 7.3e-18 | 27.46 | Show/hide |
Query: SNLDDKLIWHYDRMGKYTVKSGYKLFMKSK----------IDGISSSSSPM---------NKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFH
+N+DD L+WH+D +G+YTVKSGY++ + + ++ + N D V + T+S+E+ + I FWALW NK+ H
Subjt: SNLDDKLIWHYDRMGKYTVKSGYKLFMKSK----------IDGISSSSSPM---------NKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFH
Query: VEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVV
R+ I+D L + + + N +++ T ++ W PP G KLN DA+ ++ S+ ++ ++ G ++ + +D
Subjt: VEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVV
Query: LAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYARL
+AE R L A+ +G K+ +E D TTIK + +L S + I + ++ +DIS+ FIPRR N+ A LA RL
Subjt: LAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYARL
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| KAA3462946.1 non-ltr retroelement reverse transcriptase [Gossypium australe] | 2.7e-04 | 51.16 | Show/hide |
Query: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNI
MN+ L+ PF + EI++ +K M P KAPG DG+P +F+Q+YW+I
Subjt: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNI
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| KAA3462946.1 non-ltr retroelement reverse transcriptase [Gossypium australe] | 1.1e-16 | 26.3 | Show/hide |
Query: NNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYW-----NIVVPINSNLD-------------------DKLIWHYDRMGKYTVKSGYKLFMKS
N +L AP K+EI A+ +M P K+PGPDG+ FYQ +W +I P+ S LD D+L+W ++ G YTVKSGYK +KS
Subjt: NNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYW-----NIVVPINSNLD-------------------DKLIWHYDRMGKYTVKSGYKLFMKS
Query: K-------IDG-----ISSSSSPMNKGSF--IDRWVKINATS--SSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWI-KDYLESFRSANEKPQRN
K +DG SS+ P K + R + + + S ++E VA I +W++RN W+ +S +
Subjt: K-------IDG-----ISSSSSPMNKGSF--IDRWVKINATS--SSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWI-KDYLESFRSANEKPQRN
Query: ASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTT
RA Q + P +G+ K N DA+ S+ TG G ++ +G + + + ++ +V E ILE +R A+ + ESD +
Subjt: ASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTT
Query: IKFILKDLNAWSDVEAILTSTWEMIPC
+ I + S++ +I+ S ++ C
Subjt: IKFILKDLNAWSDVEAILTSTWEMIPC
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| KAA3468379.1 reverse transcriptase [Gossypium australe] | 2.4e-16 | 28.32 | Show/hide |
Query: SNLDDKLIWHYDRMGKYTVKSGYKL---------------------FMKSKIDGISSSSSPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKI
+N+DD L+W +D G+YTVKSGY++ F K+ + S+ + G D V + T+S+E+ + I FWALW RNK+
Subjt: SNLDDKLIWHYDRMGKYTVKSGYKL---------------------FMKSKIDGISSSSSPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKI
Query: FHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDIL-VSSSIFLDFQM
H R+ I+D L + + + N + + T ++ W PP G KLN DA+ ++ P S+ ++ ++ G ++ V ++D +
Subjt: FHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDIL-VSSSIFLDFQM
Query: DVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYAR
D +AE R L A+ +G K+ +E D T IK + +L S + I + ++ +DIS+ FIP R N+ A LA R
Subjt: DVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYAR
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| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 1.5e-23 | 25.79 | Show/hide |
Query: VPINS-NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSS---------------------------------------------------------
+PI+S NL D +WHYD+ G Y+V+SGYKL+M K + S+S+
Subjt: VPINS-NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSS---------------------------------------------------------
Query: -------------------------SPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNA
S + SF++ W + +DL+ AI W +WNDRN + H +++ P+ + +W+ +L+S A Q +
Subjt: -------------------------SPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNA
Query: SSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTI
S R N + W KLN+DA C ST G + +D S ++ ++SI + F + +LAE+R ILEGL+ A ++VESD I
Subjt: SSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTI
Query: KFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKY
+ I +++ D + + + CF ISF R+CN+ A LAK+
Subjt: KFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKY
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| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 3.1e-08 | 60.87 | Show/hide |
Query: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNIVVP
+N +L+AP+ K+EIE AI++MFPTKA GPDG+P +FYQ YW++V P
Subjt: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNIVVP
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| XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia] | 2.7e-20 | 35.14 | Show/hide |
Query: SSPMNKG-SFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPP-E
+SP+N SF+D W+ + + + A WA+W DRN H + A R WI Y +++ A E + +PQ ++ +C LPP +
Subjt: SSPMNKG-SFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPP-E
Query: GYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDL
K+NSDA C STGLGL+ +D G +LV+ S+FL ++ + AE+RGILE L+ A ++ VESDCQ I+ + DL
Subjt: GYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5B6V1B5 Non-ltr retroelement reverse transcriptase | 1.3e-04 | 51.16 | Show/hide |
Query: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNI
MN+ L+ PF + EI++ +K M P KAPG DG+P +F+Q+YW+I
Subjt: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNI
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| A0A5B6V1B5 Non-ltr retroelement reverse transcriptase | 5.1e-17 | 26.3 | Show/hide |
Query: NNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYW-----NIVVPINSNLD-------------------DKLIWHYDRMGKYTVKSGYKLFMKS
N +L AP K+EI A+ +M P K+PGPDG+ FYQ +W +I P+ S LD D+L+W ++ G YTVKSGYK +KS
Subjt: NNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYW-----NIVVPINSNLD-------------------DKLIWHYDRMGKYTVKSGYKLFMKS
Query: K-------IDG-----ISSSSSPMNKGSF--IDRWVKINATS--SSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWI-KDYLESFRSANEKPQRN
K +DG SS+ P K + R + + + S ++E VA I +W++RN W+ +S +
Subjt: K-------IDG-----ISSSSSPMNKGSF--IDRWVKINATS--SSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWI-KDYLESFRSANEKPQRN
Query: ASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTT
RA Q + P +G+ K N DA+ S+ TG G ++ +G + + + ++ +V E ILE +R A+ + ESD +
Subjt: ASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTT
Query: IKFILKDLNAWSDVEAILTSTWEMIPC
+ I + S++ +I+ S ++ C
Subjt: IKFILKDLNAWSDVEAILTSTWEMIPC
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 7.4e-24 | 25.79 | Show/hide |
Query: VPINS-NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSS---------------------------------------------------------
+PI+S NL D +WHYD+ G Y+V+SGYKL+M K + S+S+
Subjt: VPINS-NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSS---------------------------------------------------------
Query: -------------------------SPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNA
S + SF++ W + +DL+ AI W +WNDRN + H +++ P+ + +W+ +L+S A Q +
Subjt: -------------------------SPMNKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNA
Query: SSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTI
S R N + W KLN+DA C ST G + +D S ++ ++SI + F + +LAE+R ILEGL+ A ++VESD I
Subjt: SSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTI
Query: KFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKY
+ I +++ D + + + CF ISF R+CN+ A LAK+
Subjt: KFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKY
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 1.5e-08 | 60.87 | Show/hide |
Query: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNIVVP
+N +L+AP+ K+EIE AI++MFPTKA GPDG+P +FYQ YW++V P
Subjt: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWNIVVP
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| A0A6J1DX30 uncharacterized protein LOC111024874 | 1.3e-20 | 35.14 | Show/hide |
Query: SSPMNKG-SFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPP-E
+SP+N SF+D W+ + + + A WA+W DRN H + A R WI Y +++ A E + +PQ ++ +C LPP +
Subjt: SSPMNKG-SFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPP-E
Query: GYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDL
K+NSDA C STGLGL+ +D G +LV+ S+FL ++ + AE+RGILE L+ A ++ VESDCQ I+ + DL
Subjt: GYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDL
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| A0A803QHJ7 Uncharacterized protein | 3.2e-19 | 24.84 | Show/hide |
Query: NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSSS--------------PMNKGSFIDR----WVKINATSSSEDLSKVA-----------IIFWA-
++DDK++WHY + G+Y+VKSGY++ + K + S P F+ + W+ + + +S IIF A
Subjt: NLDDKLIWHYDRMGKYTVKSGYKLFMKSKIDGISSSSS--------------PMNKGSFIDR----WVKINATSSSEDLSKVA-----------IIFWA-
Query: --------LWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKS
LWN RN H +P A +W L F+ +PQ + W +P G K+N D + +GLG + + +
Subjt: --------LWNDRNKIFHVEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKS
Query: GDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYA
GD+L +SS + + + EL IL+G++ L + +ESDC I+ I K + DV+ +L ++ I F+ R NK A +LA YA
Subjt: GDILVSSSIFLDFQMDVVLAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYA
Query: RLKRCNEAWPITML
+ + + W + +L
Subjt: RLKRCNEAWPITML
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| A0A803QHJ7 Uncharacterized protein | 3.5e-05 | 59.52 | Show/hide |
Query: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWN
MN L+A F + +I +A+KEM PTKAPG DG P +FYQK+WN
Subjt: MNNKLMAPFNKQEIEKAIKEMFPTKAPGPDGYPVVFYQKYWN
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| A0A803QHJ7 Uncharacterized protein | 3.6e-18 | 27.46 | Show/hide |
Query: SNLDDKLIWHYDRMGKYTVKSGYKLFMKSK----------IDGISSSSSPM---------NKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFH
+N+DD L+WH+D +G+YTVKSGY++ + + ++ + N D V + T+S+E+ + I FWALW NK+ H
Subjt: SNLDDKLIWHYDRMGKYTVKSGYKLFMKSK----------IDGISSSSSPM---------NKGSFIDRWVKINATSSSEDLSKVAIIFWALWNDRNKIFH
Query: VEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVV
R+ I+D L + + + N +++ T ++ W PP G KLN DA+ ++ S+ ++ ++ G ++ + +D
Subjt: VEKIPPIATRRKWIKDYLESFRSANEKPQRNASSDRAPQNTASIQAACWSLPPEGYWKLNSDATCSEFPPSTGLGLLYKDKSGDILVSSSIFLDFQMDVV
Query: LAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYARL
+AE R L A+ +G K+ +E D TTIK + +L S + I + ++ +DIS+ FIPRR N+ A LA RL
Subjt: LAELRGILEGLRCALGLGCVKMKVESDCQTTIKFILKDLNAWSDVEAILTSTWEMIPCFDDISFDFIPRRCNKEADLLAKYARL
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