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Lcy06g012840 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012840
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPLASMODESMATA CALLOSE-BINDING PROTEIN 5
Genome locationChr06:17368074..17368364
RNA-Seq ExpressionLcy06g012840
SyntenyLcy06g012840
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061642.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo var. makuwa]2.6e-0868.75Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS A    TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

KAE8647341.1 hypothetical protein Csa_004137 [Cucumis sativus]5.9e-0866.67Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS+A    +E+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

XP_004140118.2 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis sativus]5.9e-0866.67Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS+A    +E+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

XP_008449471.1 PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo]2.6e-0868.75Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS A    TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

XP_023554742.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita pepo subsp. pepo]5.9e-0866.67Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        S +DQS    G TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

TrEMBL top hitse value%identityAlignment
A0A0A0KHV2 X8 domain-containing protein2.8e-0866.67Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS+A    +E+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

A0A1S3BN12 PLASMODESMATA CALLOSE-BINDING PROTEIN 51.3e-0868.75Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS A    TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

A0A5D3C3I2 PLASMODESMATA CALLOSE-BINDING PROTEIN 51.3e-0868.75Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        SI+DQS A    TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

A0A6J1GMC7 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like2.8e-0866.67Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        S +DQS    G TE+WCV KN+ADDASLQSALDWAC  GG DCS   P
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

A0A6J1JNE0 PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X14.9e-0865.31Show/hide
Query:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPA
        SIK Q     G TE+WCV KN+ADDASLQSALDWAC  GG DCS   P+
Subjt:  SIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPA

SwissProt top hitse value%identityAlignment
Q8VYE5 Glucan endo-1,3-beta-glucosidase 121.8e-0446.34Show/hide
Query:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP
        G T+ WC+  + A    LQ+ALDWAC  G +DCS   P  P
Subjt:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP

Q9FJU9 Glucan endo-1,3-beta-glucosidase 133.1e-0435.42Show/hide
Query:  AGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPPATMSPT
        +G +  WC+  + A +  L+ ALDWAC  G +DC+   P+ P     T
Subjt:  AGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPPATMSPT

Q9M2K6 PLASMODESMATA CALLOSE-BINDING PROTEIN 53.4e-0652.63Show/hide
Query:  EIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP
        E+WCV KN+A+D+SLQ+A++WAC  GG DC       P
Subjt:  EIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP

Arabidopsis top hitse value%identityAlignment
AT1G66855.1 Carbohydrate-binding X8 domain superfamily protein2.9e-0548.65Show/hide
Query:  LTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP
        L + WCV   SA D  LQ+ +DWAC+ G +DC + NP
Subjt:  LTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNP

AT3G58100.1 plasmodesmata callose-binding protein 52.4e-0752.63Show/hide
Query:  EIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP
        E+WCV KN+A+D+SLQ+A++WAC  GG DC       P
Subjt:  EIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP

AT4G29360.1 O-Glycosyl hydrolases family 17 protein1.3e-0546.34Show/hide
Query:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP
        G T+ WC+  + A    LQ+ALDWAC  G +DCS   P  P
Subjt:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP

AT4G29360.2 O-Glycosyl hydrolases family 17 protein1.3e-0546.34Show/hide
Query:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP
        G T+ WC+  + A    LQ+ALDWAC  G +DCS   P  P
Subjt:  GLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPP

AT5G56590.1 O-Glycosyl hydrolases family 17 protein2.2e-0535.42Show/hide
Query:  AGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPPATMSPT
        +G +  WC+  + A +  L+ ALDWAC  G +DC+   P+ P     T
Subjt:  AGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPPATMSPT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATCAAAGACCAGAGCAGCGCCTTGGCAGGCTTGACGGAGATCTGGTGTGTGGTCAAGAACAGCGCCGACGACGCCTCTCTACAATCCGCCCTCGACTGG
GCCTGCAGTGTAGGCGGCATCGATTGTTCCGAATCCAACCCGGCGCCGCCTGCTACGATGTCTCCGACGTTCCGACGTTCAAGACATGGCCTCCTTCGCCTTCAA
CGAGTATTTCCTCAAATATGGCTTGACCGACGACAGCTGCTTCTTCTAAAACTCCACCGCTATCCCCTCCTCAAACCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATCAAAGACCAGAGCAGCGCCTTGGCAGGCTTGACGGAGATCTGGTGTGTGGTCAAGAACAGCGCCGACGACGCCTCTCTACAATCCGCCCTCGACTGG
GCCTGCAGTGTAGGCGGCATCGATTGTTCCGAATCCAACCCGGCGCCGCCTGCTACGATGTCTCCGACGTTCCGACGTTCAAGACATGGCCTCCTTCGCCTTCAA
CGAGTATTTCCTCAAATATGGCTTGACCGACGACAGCTGCTTCTTCTAAAACTCCACCGCTATCCCCTCCTCAAACCCTAG
Protein sequenceShow/hide protein sequence
MSIKDQSSALAGLTEIWCVVKNSADDASLQSALDWACSVGGIDCSESNPAPPATMSPTFRRSRHGLLRLQRVFPQIWLDRRQLLLLKLHRYPLLKP