; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g012990 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g012990
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:18143981..18144304
RNA-Seq ExpressionLcy06g012990
SyntenyLcy06g012990
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019159681.1 PREDICTED: uncharacterized protein LOC109156284 [Ipomoea nil]1.9e-3163.55Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        +GF  +WIDLI+ CV+TVS+SF +NG R   + P+RGLRQGDPLSPYLF++CAEGLS LL+  + R LI G R+AR +P ISHLFFADDSLLFFKA V E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  ATTFGSC
        A    +C
Subjt:  ATTFGSC
XP_019170536.1 PREDICTED: uncharacterized protein LOC109166101 [Ipomoea nil]1.1e-3161.68Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        +GF  +WIDLI+ CV+TVS++F +NG R   +TP+RGLRQGDPLSPYLF++CAEGLS LL+  + + LI G R+AR +P ISHLFFADDSLLFF+AN+ E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  ATTFGSC
        A+   +C
Subjt:  ATTFGSC
XP_019184779.1 PREDICTED: uncharacterized protein LOC109179736 [Ipomoea nil]8.5e-3261.68Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        +GF  +WIDLI+ CV+TVS++F +NG R   +TP+RGLRQGDPLSPYLF++CAEGLS LL+  + + LI G R+AR +P ISHLFFADDSLLFF+AN+ E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  ATTFGSC
        A+   +C
Subjt:  ATTFGSC
XP_019199913.1 PREDICTED: uncharacterized protein LOC109193526 [Ipomoea nil]2.5e-3162.62Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        +GF  +W+DLI+ CV+TVS+S  +NG R   + P+RGLRQGDPLSPYLF++CAEGLS LL+      LI G R+AR +PQISHLFFADDSLLFFKANV E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  ATTFGSC
        A     C
Subjt:  ATTFGSC
XP_031116020.1 uncharacterized protein LOC116019789 [Ipomoea triloba]1.9e-3161.68Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        +GFA +W++L++ CV+TVS++F +NG  +G V P+RG+RQGDPLSPYLF++CAEGLS LL+  E R  I G R+AR SP ISHLFFADDSLLFFKAN  E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  ATTFGSC
        A     C
Subjt:  ATTFGSC
TrEMBL top hitse value%identityAlignment
A0A2N9E147 Reverse transcriptase domain-containing protein1.1e-2963Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        MGF  +W+DL++ CVST SFS  LNG   GH+TPSRGLRQGDPLSPYLFL+CAEG + L+R   ++ LI G  I R  P+ SHLFFADDS+LF+KA+V E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
A0A2N9FM05 Reverse transcriptase domain-containing protein8.6e-3063Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        MGF  +W+DL++ CVST+SFS  LNG   GH+TPSRGLRQGDPLSPYLFL+CAEG ++L+R   ++ LI G  I R  P+ SHLFFADDS+LF KA+V E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
A0A2N9HW96 Reverse transcriptase domain-containing protein8.6e-3063Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        MGF  +W+DL++ CVST SFS  LNG   GH+TPSRGLRQGDPLSPYLFL+CAEG ++L+R   ++ LI G  I+R  P+ SHLFFADDS+LF KA+V E
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
A0A6P6U7W1 uncharacterized protein LOC1137082521.1e-2962.75Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        MGF  +WI+ I  C+S+VS+SFN NGE  G VTP RG+RQGDPLSPYLFL+C+EG S+LL+  E R  I+G RI+R  P I+HLFFADDSL+F KAN  +
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  AT
        AT
Subjt:  AT
A0A6P6UXA4 uncharacterized protein LOC1137150631.1e-2962.75Show/hide
Query:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME
        MGF  +WI+ I  C+S+VS+SFN NGE  G VTP RG+RQGDPLSPYLFL+C+EG S+LL+  E R  I+G RI+R  P I+HLFFADDSL+F KAN  +
Subjt:  MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVME

Query:  AT
        AT
Subjt:  AT
SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein1.9e-0532.61Show/hide
Query:  GFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLF
        G    ++++I    S    +  +NGE+L  +    G RQG PLSPYLF +  E L+   R +  +  I G +I +   +IS L  ADD +++
Subjt:  GFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLF
P92555 Uncharacterized mitochondrial protein AtMg012506.2e-1757.97Show/hide
Query:  FNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDS
        F +NG   G VTPSRGLRQGDPLSPYLF+LC E LS L R  + +  + G R++ +SP+I+HL FADD+
Subjt:  FNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDS
Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.4e-1857.97Show/hide
Query:  FNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDS
        F +NG   G VTPSRGLRQGDPLSPYLF+LC E LS L R  + +  + G R++ +SP+I+HL FADD+
Subjt:  FNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCGCCCAGCAGTGGATTGATTTGATTATCCGATGTGTCAGTACGGTCTCATTTTCATTTAACCTAAACGGTGAGAGGTTGGGACATGTGACTCCTTCTCGTGG
GCTCAGGCAGGGGGATCCGTTGTCCCCATACCTGTTTTTACTCTGTGCTGAGGGTTTATCCAGCCTGTTGCGGGGAGTAGAACATCGATCTCTTATATCTGGGTTTCGGA
TTGCCCGGAGTAGCCCGCAGATTTCTCATCTGTTTTTTGCTGATGATAGTCTTCTGTTCTTCAAGGCGAATGTTATGGAGGCCACGACATTCGGGAGCTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTCGCCCAGCAGTGGATTGATTTGATTATCCGATGTGTCAGTACGGTCTCATTTTCATTTAACCTAAACGGTGAGAGGTTGGGACATGTGACTCCTTCTCGTGG
GCTCAGGCAGGGGGATCCGTTGTCCCCATACCTGTTTTTACTCTGTGCTGAGGGTTTATCCAGCCTGTTGCGGGGAGTAGAACATCGATCTCTTATATCTGGGTTTCGGA
TTGCCCGGAGTAGCCCGCAGATTTCTCATCTGTTTTTTGCTGATGATAGTCTTCTGTTCTTCAAGGCGAATGTTATGGAGGCCACGACATTCGGGAGCTGTTGA
Protein sequenceShow/hide protein sequence
MGFAQQWIDLIIRCVSTVSFSFNLNGERLGHVTPSRGLRQGDPLSPYLFLLCAEGLSSLLRGVEHRSLISGFRIARSSPQISHLFFADDSLLFFKANVMEATTFGSC