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Lcy06g013000 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013000
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionsuccinate dehydrogenase assembly factor 2, mitochondrial
Genome locationChr06:18197143..18204057
RNA-Seq ExpressionLcy06g013000
SyntenyLcy06g013000
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0044238 - primary metabolic process (biological process)
InterPro domainsIPR005631 - Flavinator of succinate dehydrogenase
IPR036714 - Flavinator of succinate dehydrogenase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601703.1 Succinate dehydrogenase assembly factor 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]6.1e-4375.2Show/hide
Query:  RALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVL
        RA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSFRCSST  NPL  DIDLSN+ES+RRLF RLLY+SKQRGFLELDLVL
Subjt:  RALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVL

Query:  GKWVEDHINSLDADGIKALINVLDL
        GKWVEDHINSLDADGI+ALI VLDL
Subjt:  GKWVEDHINSLDADGIKALINVLDL

KAG7032455.1 Succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-4576.15Show/hide
Query:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSFRCSST  NPL  DIDLSN+ES+RRLF RLLY+SKQRGFLE
Subjt:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDLVLGKWVEDHINSLDADGI+ALI VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

XP_022135400.1 uncharacterized protein LOC111007362 isoform X1 [Momordica charantia]3.6e-4371.54Show/hide
Query:  RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        RMATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSFR SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LE
Subjt:  RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDL+LGKWVEDHI S+DADGIKALI+VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

XP_022930034.1 succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita moschata]1.7e-4576.15Show/hide
Query:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSFRCSST  NPL TDIDLS++ES+RRLF RLLY+SKQRGFLE
Subjt:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDLVLGKWVEDHINSLDADGI+ALI VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

XP_022994486.1 succinate dehydrogenase assembly factor 2, mitochondrial [Cucurbita maxima]3.5e-4677.69Show/hide
Query:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        MATFRRAL+KAH++LY   +ST+  SKS+P+L SA I LEN Q RL NH QN HGCFFSFRCSST  NPL TDIDLSN+ES+RRLF RLLY+SKQRGFLE
Subjt:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDLVLGKWVEDHINSLDADGI ALI VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

TrEMBL top hitse value%identityAlignment
A0A0A0LKF9 Uncharacterized protein5.2e-4070.99Show/hide
Query:  RMATFRRALIKAHQLLYSETS-TILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFL
        +MATF RAL KAHQ+LY + S TIL SKS+P+L +A IGL+N Q  L+N  QNHHGCF S   SST TNP   DIDLSN++S+R+LF RLLY+SKQRGFL
Subjt:  RMATFRRALIKAHQLLYSETS-TILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFL

Query:  ELDLVLGKWVEDHINSLDADGIKALINVLDL
        ELDL+LGKWVEDHI+SLDADGI+ALINVLDL
Subjt:  ELDLVLGKWVEDHINSLDADGIKALINVLDL

A0A6J1C0N3 succinate dehydrogenase assembly factor 2, mitochondrial isoform X26.6e-4371.32Show/hide
Query:  MATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLEL
        MATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSFR SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LEL
Subjt:  MATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLEL

Query:  DLVLGKWVEDHINSLDADGIKALINVLDL
        DL+LGKWVEDHI S+DADGIKALI+VLDL
Subjt:  DLVLGKWVEDHINSLDADGIKALINVLDL

A0A6J1C101 uncharacterized protein LOC111007362 isoform X11.7e-4371.54Show/hide
Query:  RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        RMATF RA+IKAH++LY ET  IL  K++P +  A IGLEN QTRL++H Q+ HG FFSFR SST  NPL TDIDLSN+ES+RRLF RLLY+S+QRG LE
Subjt:  RMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDL+LGKWVEDHI S+DADGIKALI+VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

A0A6J1EQG7 succinate dehydrogenase assembly factor 2, mitochondrial8.3e-4676.15Show/hide
Query:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        MATFRRA++KAHQ+LY   +ST+  SKS+P+L +A I LEN Q RL NH QN HGCFFSFRCSST  NPL TDIDLS++ES+RRLF RLLY+SKQRGFLE
Subjt:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDLVLGKWVEDHINSLDADGI+ALI VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

A0A6J1JZA0 succinate dehydrogenase assembly factor 2, mitochondrial1.7e-4677.69Show/hide
Query:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE
        MATFRRAL+KAH++LY   +ST+  SKS+P+L SA I LEN Q RL NH QN HGCFFSFRCSST  NPL TDIDLSN+ES+RRLF RLLY+SKQRGFLE
Subjt:  MATFRRALIKAHQLLY-SETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLE

Query:  LDLVLGKWVEDHINSLDADGIKALINVLDL
        LDLVLGKWVEDHINSLDADGI ALI VLDL
Subjt:  LDLVLGKWVEDHINSLDADGIKALINVLDL

SwissProt top hitse value%identityAlignment
Q9FI44 Succinate dehydrogenase assembly factor 2, mitochondrial5.4e-1842.65Show/hide
Query:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK
        MAT R+ALI  H+++ S      S+I+   +++S PI++   + L                    F C +T  +    DIDLSN+E++RR   RLLY+SK
Subjt:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK

Query:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL
        QRGFLELDLVLG WVE+++NS+D +G+K+LI+VL+L
Subjt:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL

Arabidopsis top hitse value%identityAlignment
AT5G51040.1 unknown protein3.8e-1942.65Show/hide
Query:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK
        MAT R+ALI  H+++ S      S+I+   +++S PI++   + L                    F C +T  +    DIDLSN+E++RR   RLLY+SK
Subjt:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK

Query:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL
        QRGFLELDLVLG WVE+++NS+D +G+K+LI+VL+L
Subjt:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL

AT5G51040.2 unknown protein1.2e-1540.44Show/hide
Query:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK
        MAT R+ALI  H+++ S      S+I+   +++S PI++   + L                    F C +T  +    DIDLSN+E++RR   R    SK
Subjt:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK

Query:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL
        QRGFLELDLVLG WVE+++NS+D +G+K+LI+VL+L
Subjt:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDL

AT5G51040.3 unknown protein1.7e-1942.34Show/hide
Query:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK
        MAT R+ALI  H+++ S      S+I+   +++S PI++   + L                    F C +T  +    DIDLSN+E++RR   RLLY+SK
Subjt:  MATFRRALIKAHQLLYSET----STIL---SSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSK

Query:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDLI
        QRGFLELDLVLG WVE+++NS+D +G+K+LI+VL+L+
Subjt:  QRGFLELDLVLGKWVEDHINSLDADGIKALINVLDLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAATGGCGACTTTTAGAAGGGCTTTGATCAAAGCTCATCAACTTCTGTACTCGGAAACCTCCACCATTTTGAGCAGCAAATCAATTCCCATCTTGTATAGCGCTTC
TATTGGTTTGGAGAACCCACAAACCCGATTATCGAATCACTGTCAGAATCACCATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCGACGATTACAAATCCTCTACAAACAG
ATATCGACCTCTCAAATGATGAGAGCAGGAGGCGCTTGTTCACTAGGCTGCTGTACCAGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTA
GAGGATCACATCAATTCCTTGGATGCAGATGGTATCAAAGCTCTGATTAATGTTCTTGACCTGATTTGTGGAAATGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAATGGCGACTTTTAGAAGGGCTTTGATCAAAGCTCATCAACTTCTGTACTCGGAAACCTCCACCATTTTGAGCAGCAAATCAATTCCCATCTTGTATAGCGCTTC
TATTGGTTTGGAGAACCCACAAACCCGATTATCGAATCACTGTCAGAATCACCATGGTTGTTTCTTTAGTTTTCGTTGCTCTTCGACGATTACAAATCCTCTACAAACAG
ATATCGACCTCTCAAATGATGAGAGCAGGAGGCGCTTGTTCACTAGGCTGCTGTACCAGAGCAAACAACGAGGGTTTCTGGAATTGGATTTGGTACTTGGGAAATGGGTA
GAGGATCACATCAATTCCTTGGATGCAGATGGTATCAAAGCTCTGATTAATGTTCTTGACCTGATTTGTGGAAATGGTTAA
Protein sequenceShow/hide protein sequence
MRMATFRRALIKAHQLLYSETSTILSSKSIPILYSASIGLENPQTRLSNHCQNHHGCFFSFRCSSTITNPLQTDIDLSNDESRRRLFTRLLYQSKQRGFLELDLVLGKWV
EDHINSLDADGIKALINVLDLICGNG