; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g013190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationChr06:18700056..18703874
RNA-Seq ExpressionLcy06g013190
SyntenyLcy06g013190
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012717.1 putative CCR4-associated factor 1-like 11, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-13988.85Show/hide
Query:  MVNQDLK-NSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG
        MV+ DL  N  K IKIREVWASNLESEF+LIRD IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLS+SDGNLPDLG
Subjt:  MVNQDLK-NSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR

Query:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVK+MMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_022142408.1 probable CCR4-associated factor 1 homolog 11 [Momordica charantia]2.0e-14590.94Show/hide
Query:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD
        MV QDLKN++KPI+IREVWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ QNRPSDHYRLLKSNVDALNLIQIGITLS+SDGNLPDLGT 
Subjt:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF
         SRFIWEFNFMDFDVARD HAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++SLP+RLEEFLGVLRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF

Query:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        FGD VYDVK+MMRFCKSLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLE
Subjt:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_022945861.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita moschata]5.5e-14088.85Show/hide
Query:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG
        MV+ DL N++ K IKIREVWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLS+SDGNLPDLG
Subjt:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR

Query:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVK+MMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_022967098.1 probable CCR4-associated factor 1 homolog 11 [Cucurbita maxima]1.0e-13887.77Show/hide
Query:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG
        MV+ DL N++ K IKIREVWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N+ NR  SDHY+LLKSNVDALNLIQIGITLS+SDGNLPDLG
Subjt:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNR++EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR

Query:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVK+MMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

XP_038877224.1 probable CCR4-associated factor 1 homolog 11 [Benincasa hispida]2.1e-13987.32Show/hide
Query:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD
        MV  DL  +NK IKIREVWASNLESEF+LIRD+ID FPCVSMDTEFPGIVF DPARP+N Q++PSDHYRLLKSNVDAL+LIQIGITLS+SDGNLPDLGTD
Subjt:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF
        D+RFIWEFNFMDFDVARD HAPDSIELLRRQGIDF+RNRVEGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQ+ LP+R++EFLGVLRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF

Query:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        FGD VYD+K++MRFC+SLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ E++KHAGVLYGLE
Subjt:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

TrEMBL top hitse value%identityAlignment
A0A0A0LYC8 Poly(A)-specific ribonuclease1.7e-12680.43Show/hide
Query:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD
        M+  DL  ++K I+IREVWASNLESEF LIRD+ID FPCVSMDTEFPG++F     P  + N PS HY+ LKSNVD L+LIQIGITLS+SDGNLPDLGT 
Subjt:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF
        D+RFIWEFNF DFDVARD HAP+SIELLRRQGIDFDRNR EGIDS RFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILT Q LP  LE+FLGV+R+F
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF

Query:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        FGD VYD+K++MRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ E+ KHAGVLYGLE
Subjt:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

A0A5A7T1W0 Poly(A)-specific ribonuclease8.3e-12680.36Show/hide
Query:  VNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDD
        +N + ++ +KPI+IREVWASNL+SEF LI D+ID FPCVSMDTEFPG++F    +P    N PS HY+ LKSNVD L+LIQIGITLS+SDGNLPDLGT D
Subjt:  VNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDD

Query:  SRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF
        +RFIWEFNF DFDVARD HAPDSIELLRRQGIDF+RNR EGIDS RFAELMMSSGLVCN+SVSWVTFHSAYDFGYLVKILTQQ LP  LEEFLGV+RVFF
Subjt:  SRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF

Query:  GDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        GD VYD+K+MMRFC+SLYGGLDRIAK +NVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFV+ E+ KHAGVLYGLE
Subjt:  GDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

A0A6J1CN71 Poly(A)-specific ribonuclease9.5e-14690.94Show/hide
Query:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD
        MV QDLKN++KPI+IREVWASNLESEFELIRD+ID FPCVSMDTEFPG+VFTDPA+PY+ QNRPSDHYRLLKSNVDALNLIQIGITLS+SDGNLPDLGT 
Subjt:  MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTD

Query:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF
         SRFIWEFNFMDFDVARD HAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVK+LT++SLP+RLEEFLGVLRVF
Subjt:  DSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVF

Query:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        FGD VYDVK+MMRFCKSLYGGLDRIAKILNV+RAVGKCHQAGSDSLLTWHAFQKMRDT+FVQ  +EKHAGVLYGLE
Subjt:  FGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

A0A6J1G223 Poly(A)-specific ribonuclease2.7e-14088.85Show/hide
Query:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG
        MV+ DL N++ K IKIREVWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+NA NR  SDHY+LLKSNVDALNLIQIGITLS+SDGNLPDLG
Subjt:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+SLPNRL+EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR

Query:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVK+MMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

A0A6J1HU54 Poly(A)-specific ribonuclease5.0e-13987.77Show/hide
Query:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG
        MV+ DL N++ K IKIREVWASNLESEF+LIRD+IDHFPCVSMDTEFPGIVFT P  P+N+ NR  SDHY+LLKSNVDALNLIQIGITLS+SDGNLPDLG
Subjt:  MVNQDLKNSN-KPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNR-PSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLG

Query:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR
        TDDSRFIWEFNFMDFD+ARD +APDSI+LLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDF YL+KILTQ+ LPNR++EFLGVLR
Subjt:  TDDSRFIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLR

Query:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        V FGD VYDVK+MMRFCKSLYGGLDRIAK LNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQ EVEKHAGVLYGLE
Subjt:  VFFGDYVYDVKHMMRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 112.2e-10771.05Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDL-GTDDSRFIWEFNFM
        I IR+VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLS++DGNLPDL G  + R+IWEFNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDL-GTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        DFDV RD HAPDSIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP  L EFLG+LR FFGD VYDVKH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLE
Subjt:  MRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

Q9LEU4 Probable CCR4-associated factor 1 homolog 101.1e-7453.99Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFMD
        I IREVW  NL  EF LIR+++D F  ++MDTEFPG+V   P   +   N    +YR LK NVD L LIQ+G+T S+ +GNLP  GT D   IW+FNF +
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFMD

Query:  FDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHMM
        F++  D +A +SIELLR+ GIDF +N  +GID  RF ELMMSSG+V ND++SWVTFH  YDFGYLVK+LT + LP +  +F  +L V+F   VYD+KH+M
Subjt:  FDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHMM

Query:  RFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGL
         FC  L+GGL+R+A+++ V R VG CHQAGSDSLLT  +F+K+++ +F     EK+ GVLYGL
Subjt:  RFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGL

Q9LXM2 Probable CCR4-associated factor 1 homolog 96.8e-10970.29Show/hide
Query:  NQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDS
        N+DLK     +  REVWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLS+ +GNLPDLG D  
Subjt:  NQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF
        R FIWEFNF DFDVARD HAPDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  V+RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF

Query:  GDYVYDVKHMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        G+ VYDVKHMM+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLE
Subjt:  GDYVYDVKHMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.1e-7855.39Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T SN  GNLP  GT D   IW+FNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  ++ V+F   VYD+KH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL    G
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG

Q9SKZ2 Probable CCR4-associated factor 1 homolog 72.5e-7955.76Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM
        I+IREVW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  LK+NV+ L +IQ+G+T S+  GNLP  GTD+   IW+FNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        +FD+  D +A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+KH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL    G
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-7955.39Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T SN  GNLP  GT D   IW+FNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  ++ V+F   VYD+KH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL    G
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-7955.39Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM
        I+IREVW  NL+ E +LIRDV+D FP V+MDTEFPGIV     RP       +D HY  LK+NV+ L +IQ+G+T SN  GNLP  GT D   IW+FNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSD-HYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        +FD+  D  A DSIELL++ GID  +N ++GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP+   +F  ++ V+F   VYD+KH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG
        M+FC SL+GGL+++A++L V R VG CHQAGSDSLLT   F+K+++ FFV   + K++GVLYGL    G
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-8055.76Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM
        I+IREVW  NLESE  LIR+V+D FP V+MDTEFPGIV     RP    +     HY  LK+NV+ L +IQ+G+T S+  GNLP  GTD+   IW+FNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNA-QNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        +FD+  D +A DSIELLR+ GIDF +N   GIDS RFAEL+MSSG+V N++V WVTFHS YDFGYL+K+LT Q+LP     F  ++ V+F   VYD+KH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG
        M+FC SL+GGL+++A++L+V R VG CHQAGSDSLLT   F+K+++ FF+   +EK++GVLYGL    G
Subjt:  MRFCKSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGG

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-11070.29Show/hide
Query:  NQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDS
        N+DLK     +  REVWA NLESEFELI ++ID +P +SMDTEFPG++F    R  N    P D Y LLK+NVDAL+LIQ+G+TLS+ +GNLPDLG D  
Subjt:  NQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDS

Query:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF
        R FIWEFNF DFDVARD HAPDSIELLRRQGIDF+RN  +G++S RFAELMMSSGLVCN+ VSWVTFHSAYDFGYL+KILT++ LP  L EF  V+RV F
Subjt:  R-FIWEFNFMDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFF

Query:  GDYVYDVKHMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        G+ VYDVKHMM+FC + L+GGLDR+A+ L VNRAVGKCHQAGSDSLLTWHAFQ+MRD +FVQ+  EKHAGVLYGLE
Subjt:  GDYVYDVKHMMRFC-KSLYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE

AT5G22250.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-10871.05Show/hide
Query:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDL-GTDDSRFIWEFNFM
        I IR+VWA NLESEF+LIR +++ +P +SMDTEFPG+++          N P+  Y LLKSNVDAL+LIQ+G+TLS++DGNLPDL G  + R+IWEFNF 
Subjt:  IKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDL-GTDDSRFIWEFNFM

Query:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM
        DFDV RD HAPDSIELLRR GIDF+RNR EG++S RFAELMMSSGL+CN+SVSWVTFHSAYDFGYLVKILT++ LP  L EFLG+LR FFGD VYDVKH+
Subjt:  DFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHM

Query:  MRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE
        MRFC+  LYGGLDR+A+ L VNRAVGKCHQAGSDSLLTW AFQ+MRD +FV++  EKHAGVLYGLE
Subjt:  MRFCKS-LYGGLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAACCAAGATCTCAAGAACAGCAATAAACCCATCAAAATCAGAGAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTT
CCCTTGCGTTTCAATGGACACCGAGTTTCCCGGAATCGTTTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCCA
ACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCAATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTC
ATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCG
GTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTGGTTAAGATTTTGACTCAAC
AGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCGTTCTCAGGGTTTTCTTTGGCGATTACGTGTACGATGTGAAGCACATGATGCGATTCTGTAAGAGCCTCTACGGC
GGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGA
TACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGAAACCAGGGGGTAACAAGGAATTGGATTTGAAGGATCCAGGGCCGAGCAAAC
GAAGGGATCATAAGGGTGCACTTGACGCTCTAGATGAAACCAGTACAGTGGGTTCGCACAAGATGGCTGAGGCCGAAGCCAGAATTGGGGCAGAGATTGAACTTGAGGCA
AGAGTCCGGGCTGAAGTTGAGGCTAAGAAAAGCTTGTCCGACGATGAAGGCACAGCGGCAAGCGCAACGACGCCGGCGAGAAAGAGGAACGATTTACCGGCTGAAGCAAA
GGAAACCGAACCCATCGAAAACGAAAACGAAAACGAAAGCGACGATGGCAATGAGCGATTGCCGGTGAAGTGGTTTCGGTTGCCGGTGAAAGCGAGATTAGGCTTTGGTC
GGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAACCAAGATCTCAAGAACAGCAATAAACCCATCAAAATCAGAGAAGTTTGGGCCTCGAATCTCGAATCTGAGTTCGAGTTGATCCGCGATGTCATCGATCACTT
CCCTTGCGTTTCAATGGACACCGAGTTTCCCGGAATCGTTTTCACCGACCCGGCCAGACCCTACAACGCTCAGAATCGCCCCTCCGATCACTACAGACTCCTCAAATCCA
ACGTCGATGCTCTCAATCTCATCCAGATCGGCATCACTCTCTCCAATTCCGACGGCAACCTCCCGGATCTCGGCACCGACGACAGCCGTTTCATCTGGGAGTTCAACTTC
ATGGACTTCGACGTGGCGCGTGACTTCCACGCGCCGGACTCCATCGAGCTTCTCCGCCGCCAGGGCATCGACTTCGACCGGAACCGAGTCGAAGGGATCGACTCGTGCCG
GTTCGCCGAGTTGATGATGTCATCCGGACTCGTTTGTAACGACTCAGTGAGTTGGGTGACCTTTCACAGCGCCTACGATTTTGGATATTTGGTTAAGATTTTGACTCAAC
AGAGCCTTCCGAATCGGCTAGAGGAATTCCTCGGCGTTCTCAGGGTTTTCTTTGGCGATTACGTGTACGATGTGAAGCACATGATGCGATTCTGTAAGAGCCTCTACGGC
GGTTTGGACCGGATCGCGAAGATTTTGAATGTGAACCGGGCGGTTGGGAAGTGCCATCAGGCCGGTTCGGATAGTTTGTTGACGTGGCATGCGTTTCAGAAGATGAGGGA
TACGTTTTTTGTACAGGAGGAGGTGGAGAAACATGCTGGCGTGTTGTATGGATTGGAGAAACCAGGGGGTAACAAGGAATTGGATTTGAAGGATCCAGGGCCGAGCAAAC
GAAGGGATCATAAGGGTGCACTTGACGCTCTAGATGAAACCAGTACAGTGGGTTCGCACAAGATGGCTGAGGCCGAAGCCAGAATTGGGGCAGAGATTGAACTTGAGGCA
AGAGTCCGGGCTGAAGTTGAGGCTAAGAAAAGCTTGTCCGACGATGAAGGCACAGCGGCAAGCGCAACGACGCCGGCGAGAAAGAGGAACGATTTACCGGCTGAAGCAAA
GGAAACCGAACCCATCGAAAACGAAAACGAAAACGAAAGCGACGATGGCAATGAGCGATTGCCGGTGAAGTGGTTTCGGTTGCCGGTGAAAGCGAGATTAGGCTTTGGTC
GGAGGTGA
Protein sequenceShow/hide protein sequence
MVNQDLKNSNKPIKIREVWASNLESEFELIRDVIDHFPCVSMDTEFPGIVFTDPARPYNAQNRPSDHYRLLKSNVDALNLIQIGITLSNSDGNLPDLGTDDSRFIWEFNF
MDFDVARDFHAPDSIELLRRQGIDFDRNRVEGIDSCRFAELMMSSGLVCNDSVSWVTFHSAYDFGYLVKILTQQSLPNRLEEFLGVLRVFFGDYVYDVKHMMRFCKSLYG
GLDRIAKILNVNRAVGKCHQAGSDSLLTWHAFQKMRDTFFVQEEVEKHAGVLYGLEKPGGNKELDLKDPGPSKRRDHKGALDALDETSTVGSHKMAEAEARIGAEIELEA
RVRAEVEAKKSLSDDEGTAASATTPARKRNDLPAEAKETEPIENENENESDDGNERLPVKWFRLPVKARLGFGRR