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Lcy06g013410 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013410
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:19901407..19901937
RNA-Seq ExpressionLcy06g013410
SyntenyLcy06g013410
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR005135 - Endonuclease/exonuclease/phosphatase
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]3.7e-4050.29Show/hide
Query:  ERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFY
        E  G+GNP A+ +LR  VRK +P L+FLSETK  G     ++ +++F +SF V  +G SGGL+LLW  +  V++KSFS GHIDA     G + WRFTGFY
Subjt:  ERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFY

Query:  GNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        GNP+   R +SW+LL RL  L DLPWI GGDFNEIL  +EKKGG  ++   +  F+   + C LVD+G++G
Subjt:  GNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

XP_024021734.1 uncharacterized protein LOC112091706 [Morus notabilis]8.2e-4048.26Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGND-WWRFTGFYGNP
        G+GNPRA   LR+ +R  +P L FL ET+ + +   S+K +  F   F V   G SGGL+L+WK+EV V+I+S+S+ HID      +  WWRFTGFYGNP
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGND-WWRFTGFYGNP

Query:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS
         R  R  SW LL RL SL +LPW+V GDFNEILF  +K+GG  +    ++ F+ T   C LVDLG+ G K +
Subjt:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS

XP_028075737.1 uncharacterized protein LOC114277953 [Camellia sinensis]6.9e-3947.93Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFL--MGNDWWRFTGFYGN
        G+GNPR VR L+L ++K  P ++FL ETK   R    ++ KL     F V  +GLSGGL LLW  E+ + IKSFS+GH+D+  L   G   W FTGFYGN
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFL--MGNDWWRFTGFYGN

Query:  PERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        P    R++SWELL+RL     LPW+  GDFNEIL+ HEK G   ++Q+ +D F+   + C L DLG++G
Subjt:  PERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

XP_042950313.1 uncharacterized protein LOC122282426 [Carya illinoinensis]5.3e-3945.35Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGNDW-WRFTGFYGNP
        G+GNP  +R+LR  + +  PDL+FL ETK   +  ++LK KL F + F V S G SGGL LLW  ++ V ++SFS+ HID    + +   WRFTG YG+P
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGNDW-WRFTGFYGNP

Query:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS
        +  +RT +W L++ L S++ LPW+VGGD NE+L  HEK+GGR +    ++AF+     C L DLGYKG + +
Subjt:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]6.9e-3945.93Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGNDW-WRFTGFYGNP
        G+GNP  +R+LR  + +  PDL+FL ETK   +  ++LK KL F + F V S G SGGL LLW  ++ V ++SFSK HID    M +   WRFTG YG+P
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGNDW-WRFTGFYGNP

Query:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS
        +  +RT +W L++ L S++ +PW+VGGD NE+L  HEK+GGR +    ++AF+     C L DLGYKG + +
Subjt:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS

TrEMBL top hitse value%identityAlignment
A0A2N9G1F9 Uncharacterized protein4.4e-3949.4Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGNP
        G+GNP AVR+L   V+K  P+++FL ETK        ++ KL FD++F VPS+G SGGL LLWK +  V I+++S+ HIDA         WR TGFYG P
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGNP

Query:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        E+ +R ESW LLK L SLD LPW   GDFNEIL  +EK GGR ++ + +  F+   N+C+ VDLG++G
Subjt:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

A0A2N9G1M2 Uncharacterized protein1.2e-3949.42Show/hide
Query:  LERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGF
        LE  G+GNP AVR+L   V+K  P+++FL ETK        ++ KL FD++F VPS+G SGGL LLWK +  V I+++S+ HIDA         WR TGF
Subjt:  LERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGF

Query:  YGNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        YG PE+ +R ESW LLK L SLD LPW   GDFNEIL  +EK GGR ++ + +  F+   N+C+ VDLG++G
Subjt:  YGNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

A0A2N9HCL8 Reverse transcriptase domain-containing protein5.2e-4049.4Show/hide
Query:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGNP
        G+GNP+AVR+L   V+   P ++FL ETK  G     ++ KL FD+ F VPS+G SGGL LLWK E  V I++FS+ HIDA         WR TGFYG P
Subjt:  GVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGNP

Query:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        E+ +R ESW LLK L ++D  PW+  GDFNE+L  HEK GG  ++ + +  F+   N+ HLVDLGY+G
Subjt:  ERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

A0A2N9HS57 Reverse transcriptase domain-containing protein2.6e-3949.71Show/hide
Query:  SGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGN
        +G+GNP AVR+L   V+K  P+++FL ETK        ++ KL FD++F VPS+G SGGL LLWK E  V I++FS+ HIDA       + WR TGFYG 
Subjt:  SGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFYGN

Query:  PERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDK
        PE  +R ESW LLK L  +D LPW   GDFNEIL  +EK GGR ++ + +  F+   N C+LVDLG++G K
Subjt:  PERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDK

A0A7J6DZ24 CCHC-type domain-containing protein1.8e-4050.29Show/hide
Query:  ERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFY
        E  G+GNP A+ +LR  VRK +P L+FLSETK  G     ++ +++F +SF V  +G SGGL+LLW  +  V++KSFS GHIDA     G + WRFTGFY
Subjt:  ERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASF-LMGNDWWRFTGFY

Query:  GNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG
        GNP+   R +SW+LL RL  L DLPWI GGDFNEIL  +EKKGG  ++   +  F+   + C LVD+G++G
Subjt:  GNPERDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAACGTTCGGGGGTGGGGAACCCCCGAGCGGTCCGATCCTTGCGTCTGGAAGTGCGCAAAAATAACCCTGATTTGATTTTCCTTTCTGAAACTAAGGAT
AAAGGAAGAAACAAGAATAGTCTGAAAGCGAAGTTGAACTTTGATCACAGTTTTGAGGTGCCAAGCATAGGTCTTAGTGGTGGTTTGGTGCTTCTTTGGAAAAAG
GAGGTGGTGGTTAATATTAAATCCTTTTCCAAGGGGCACATTGATGCTTCTTTTCTGATGGGTAACGATTGGTGGAGATTCACAGGGTTCTATGGGAACCCAGAG
AGAGATAAGCGTACTGAGTCTTGGGAGTTACTGAAAAGGCTTCACTCTTTAGATGATCTCCCATGGATTGTGGGAGGTGATTTTAATGAGATTTTGTTTGATCAC
GAGAAGAAAGGGGGGAGGCCTAAGAATCAGCAGGATTTGGATGCCTTTAAGTCCACGTTTAACCTGTGTCATCTAGTGGATCTGGGGTATAAAGGAGATAAGTTA
TCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAACGTTCGGGGGTGGGGAACCCCCGAGCGGTCCGATCCTTGCGTCTGGAAGTGCGCAAAAATAACCCTGATTTGATTTTCCTTTCTGAAACTAAGGAT
AAAGGAAGAAACAAGAATAGTCTGAAAGCGAAGTTGAACTTTGATCACAGTTTTGAGGTGCCAAGCATAGGTCTTAGTGGTGGTTTGGTGCTTCTTTGGAAAAAG
GAGGTGGTGGTTAATATTAAATCCTTTTCCAAGGGGCACATTGATGCTTCTTTTCTGATGGGTAACGATTGGTGGAGATTCACAGGGTTCTATGGGAACCCAGAG
AGAGATAAGCGTACTGAGTCTTGGGAGTTACTGAAAAGGCTTCACTCTTTAGATGATCTCCCATGGATTGTGGGAGGTGATTTTAATGAGATTTTGTTTGATCAC
GAGAAGAAAGGGGGGAGGCCTAAGAATCAGCAGGATTTGGATGCCTTTAAGTCCACGTTTAACCTGTGTCATCTAGTGGATCTGGGGTATAAAGGAGATAAGTTA
TCCTAG
Protein sequenceShow/hide protein sequence
MLERSGVGNPRAVRSLRLEVRKNNPDLIFLSETKDKGRNKNSLKAKLNFDHSFEVPSIGLSGGLVLLWKKEVVVNIKSFSKGHIDASFLMGNDWWRFTGFYGNPE
RDKRTESWELLKRLHSLDDLPWIVGGDFNEILFDHEKKGGRPKNQQDLDAFKSTFNLCHLVDLGYKGDKLS