; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g013560 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013560
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionreplication protein A 70 kDa DNA-binding subunit E-like
Genome locationChr06:20616088..20617959
RNA-Seq ExpressionLcy06g013560
SyntenyLcy06g013560
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0044260 - cellular macromolecule metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8519657.1 hypothetical protein F0562_013898 [Nyssa sinensis]2.8e-0624.21Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--GESFYLKKENFCSF--ESLMVGNSETNTLPI------AENEGQYLEGNEQAQSVIVITNV
        K Y+I +G +K  + ++ ++HP  E+          V   G+S+ +KK+N        + + N E ++LP+      A NEGQ L+ N   + +I+++++
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--GESFYLKKENFCSF--ESLMVGNSETNTLPI------AENEGQYLEGNEQAQSVIVITNV

Query:  KPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIKGKDKKKEKSKHFQNLVVAEDKN
          T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D++       E + ++    + + +N
Subjt:  KPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIKGKDKKKEKSKHFQNLVVAEDKN

KAA8522676.1 hypothetical protein F0562_009162 [Nyssa sinensis]2.3e-0521.33Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEG-------------------------------------ESFYLKKE--NFCSFESLMVGNSE
        K Y+I +G +K  + ++ ++HP  E+ L  ++D++E                                        +++ +KK+         + + N E
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEG-------------------------------------ESFYLKKE--NFCSFESLMVGNSE

Query:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND
         ++LPI      A NEGQ LE N   + +I+++++  + ++G+  +S+T +S I  +P   +A+ LK    ++S     V+ L    KK+ +AKE+N+ D
Subjt:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND

Query:  IIKGKDKKKEKSKHFQNLVVAEDKN
        ++       E + ++    + + +N
Subjt:  IIKGKDKKKEKSKHFQNLVVAEDKN

KAA8529463.1 hypothetical protein F0562_033738 [Nyssa sinensis]5.5e-0722.8Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE
        K Y+I +G +K  + ++ ++HP  E+ L ++++++E                                       G+S+ +KK+N        + + N E
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE

Query:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND
         ++LPI      A NEGQ L+ N   + +IV++N+  T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D
Subjt:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND

Query:  IIKGKDKKKEKSKHFQNLVVAE----DKNYYLIRMDKVGKSDCARKQIVV
        ++       E + ++    + +    D+ +Y IR++ +  +D   K IV+
Subjt:  IIKGKDKKKEKSKHFQNLVVAE----DKNYYLIRMDKVGKSDCARKQIVV

KAA8535419.1 hypothetical protein F0562_030422 [Nyssa sinensis]1.0e-0522.79Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE
        K Y+I +G +K  + ++ ++HP  E+ L ++++++E                                       G+S+ +KK+N        + + N E
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE

Query:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND
         ++LPI      A NEGQ L+ N   + +IV++N+  T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D
Subjt:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND

Query:  IIKGKDKKKEKSKHF
        ++       E + ++
Subjt:  IIKGKDKKKEKSKHF

XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]1.0e-3747.03Show/hide
Query:  KGKTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEGESFYLKKENFCSFES----------------------------------LMVGNSETNT
        KGKTY I+DG IK IDVRY+++H K EISLS+NS +KE+EGE+F+L K++FC+FES                                  +++ +++ NT
Subjt:  KGKTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEGESFYLKKENFCSFES----------------------------------LMVGNSETNT

Query:  L------PIAENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIK
        +       +AENEGQYLE N + Q+VI+ITNV+P +FEGE++ISS+ ISV+AINP L   E+LKCR    + +  K+  LLYP KK++EAKEV+M+D+IK
Subjt:  L------PIAENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIK

Query:  GK
        GK
Subjt:  GK

TrEMBL top hitse value%identityAlignment
A0A5J4ZI14 REPA_OB_2 domain-containing protein3.3e-0522.53Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--------------------------------GESFYLKKEN--FCSFESLMVGNSETNTLP
        K Y+I +G +K  + ++ ++HP  E+ L ++++++E                                  G+S+ +KK+N        + + N E ++LP
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--------------------------------GESFYLKKEN--FCSFESLMVGNSETNTLP

Query:  I------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQ-------DANSCKRPKVECLLY--PFKKMIEAKEV
        I      A NEGQ L+ N   + +IV++N+  T ++G+  +S+T +S I  +P  E+ + LK          D N     KV  +L+  P   +I     
Subjt:  I------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQ-------DANSCKRPKVECLLY--PFKKMIEAKEV

Query:  NMNDIIKGKDKKKEKSKHFQNLVVAEDKNY-YLIRMDKVGKSDCARKQIVVQE
         ++D I    K K +S  ++ +V  +  +Y +L   ++V  S   +   ++ +
Subjt:  NMNDIIKGKDKKKEKSKHFQNLVVAEDKNY-YLIRMDKVGKSDCARKQIVVQE

A0A5J4ZR73 REPA_OB_2 domain-containing protein1.3e-0624.21Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--GESFYLKKENFCSF--ESLMVGNSETNTLPI------AENEGQYLEGNEQAQSVIVITNV
        K Y+I +G +K  + ++ ++HP  E+          V   G+S+ +KK+N        + + N E ++LP+      A NEGQ L+ N   + +I+++++
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE--GESFYLKKENFCSF--ESLMVGNSETNTLPI------AENEGQYLEGNEQAQSVIVITNV

Query:  KPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIKGKDKKKEKSKHFQNLVVAEDKN
          T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D++       E + ++    + + +N
Subjt:  KPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIKGKDKKKEKSKHFQNLVVAEDKN

A0A5J5AEN5 Uncharacterized protein2.7e-0722.8Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE
        K Y+I +G +K  + ++ ++HP  E+ L ++++++E                                       G+S+ +KK+N        + + N E
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE

Query:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND
         ++LPI      A NEGQ L+ N   + +IV++N+  T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D
Subjt:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND

Query:  IIKGKDKKKEKSKHFQNLVVAE----DKNYYLIRMDKVGKSDCARKQIVV
        ++       E + ++    + +    D+ +Y IR++ +  +D   K IV+
Subjt:  IIKGKDKKKEKSKHFQNLVVAE----DKNYYLIRMDKVGKSDCARKQIVV

A0A5J5AYF5 Uncharacterized protein5.1e-0622.79Show/hide
Query:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE
        K Y+I +G +K  + ++ ++HP  E+ L ++++++E                                       G+S+ +KK+N        + + N E
Subjt:  KTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVE-------------------------------------GESFYLKKEN--FCSFESLMVGNSE

Query:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND
         ++LPI      A NEGQ L+ N   + +IV++N+  T ++G+  +S+T +S I  +P   + + LK    ++      V+ L    KK+ +AKE+N+ D
Subjt:  TNTLPI------AENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMND

Query:  IIKGKDKKKEKSKHF
        ++       E + ++
Subjt:  IIKGKDKKKEKSKHF

A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like5.0e-3847.03Show/hide
Query:  KGKTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEGESFYLKKENFCSFES----------------------------------LMVGNSETNT
        KGKTY I+DG IK IDVRY+++H K EISLS+NS +KE+EGE+F+L K++FC+FES                                  +++ +++ NT
Subjt:  KGKTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEGESFYLKKENFCSFES----------------------------------LMVGNSETNT

Query:  L------PIAENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIK
        +       +AENEGQYLE N + Q+VI+ITNV+P +FEGE++ISS+ ISV+AINP L   E+LKCR    + +  K+  LLYP KK++EAKEV+M+D+IK
Subjt:  L------PIAENEGQYLEGNEQAQSVIVITNVKPTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIK

Query:  GK
        GK
Subjt:  GK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGTGGTTATTAGTGAGCTCAAGCCTTTTCAAAGAGGATCGACCACTAAAGGAAAAACATATGTGATCCATGATGGTGTCATCAAACTAATTGACGTCAGATACAT
CAGCATTCATCCAAAATTTGAGATATCATTATCCAAAAACAGTGACTTGAAAGAGGTTGAGGGAGAAAGTTTTTATCTGAAGAAGGAAAATTTTTGCAGCTTTGAATCAT
TGATGGTCGGTAACAGTGAAACGAATACTCTCCCCATAGCCGAAAATGAAGGACAATATCTAGAGGGAAATGAGCAAGCGCAAAGTGTTATTGTAATCACCAATGTAAAG
CCTACTAAATTTGAAGGTGAGATAACCATATCATCTACGGTCATTAGCGTTATTGCCATAAATCCTCCCCTGGAGAGAGCAGAATCATTGAAGTGTAGGCAAGATGCAAA
CTCTTGTAAAAGACCAAAAGTTGAATGTCTTTTATATCCATTCAAAAAGATGATAGAAGCAAAAGAGGTCAACATGAATGACATTATCAAAGGAAAAGATAAGAAAAAAG
AAAAAAGTAAACATTTTCAGAATTTGGTGGTAGCAGAAGATAAGAACTACTACTTAATCAGAATGGACAAAGTAGGAAAGAGCGATTGTGCACGTAAACAAATAGTTGTT
CAAGAAATTTGCAGTGTCATTTCGATGGCTAGCAAAAGACACAAAAAAGGTGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGTGGTTATTAGTGAGCTCAAGCCTTTTCAAAGAGGATCGACCACTAAAGGAAAAACATATGTGATCCATGATGGTGTCATCAAACTAATTGACGTCAGATACAT
CAGCATTCATCCAAAATTTGAGATATCATTATCCAAAAACAGTGACTTGAAAGAGGTTGAGGGAGAAAGTTTTTATCTGAAGAAGGAAAATTTTTGCAGCTTTGAATCAT
TGATGGTCGGTAACAGTGAAACGAATACTCTCCCCATAGCCGAAAATGAAGGACAATATCTAGAGGGAAATGAGCAAGCGCAAAGTGTTATTGTAATCACCAATGTAAAG
CCTACTAAATTTGAAGGTGAGATAACCATATCATCTACGGTCATTAGCGTTATTGCCATAAATCCTCCCCTGGAGAGAGCAGAATCATTGAAGTGTAGGCAAGATGCAAA
CTCTTGTAAAAGACCAAAAGTTGAATGTCTTTTATATCCATTCAAAAAGATGATAGAAGCAAAAGAGGTCAACATGAATGACATTATCAAAGGAAAAGATAAGAAAAAAG
AAAAAAGTAAACATTTTCAGAATTTGGTGGTAGCAGAAGATAAGAACTACTACTTAATCAGAATGGACAAAGTAGGAAAGAGCGATTGTGCACGTAAACAAATAGTTGTT
CAAGAAATTTGCAGTGTCATTTCGATGGCTAGCAAAAGACACAAAAAAGGTGAATAA
Protein sequenceShow/hide protein sequence
MDVVISELKPFQRGSTTKGKTYVIHDGVIKLIDVRYISIHPKFEISLSKNSDLKEVEGESFYLKKENFCSFESLMVGNSETNTLPIAENEGQYLEGNEQAQSVIVITNVK
PTKFEGEITISSTVISVIAINPPLERAESLKCRQDANSCKRPKVECLLYPFKKMIEAKEVNMNDIIKGKDKKKEKSKHFQNLVVAEDKNYYLIRMDKVGKSDCARKQIVV
QEICSVISMASKRHKKGE