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Lcy06g013600 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013600
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibosomal RNA small subunit methyltransferase G
Genome locationChr06:20987161..20988307
RNA-Seq ExpressionLcy06g013600
SyntenyLcy06g013600
Gene Ontology termsGO:0035493 - SNARE complex assembly (biological process)
GO:0000323 - lytic vacuole (cellular component)
GO:0005768 - endosome (cellular component)
GO:0000149 - SNARE binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70694.1 hypothetical protein VITISV_002394 [Vitis vinifera]3.0e-0479.41Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
        F + P VETGYENL LVRLLLEMRLPSIRKS V+
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
OMP00367.1 hypothetical protein COLO4_12726 [Corchorus olitorius]5.2e-0457.14Show/hide
Query:  DQNLLHSCGGLTFLRVEGKELENFKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
        D  L  SCG           L   KV P VETGYENL LVRLLLEMR+P+IRKS V
Subjt:  DQNLLHSCGGLTFLRVEGKELENFKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
XP_002275801.1 PREDICTED: uncharacterized protein LOC100260183 [Vitis vinifera]3.0e-0479.41Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
        F + P VETGYENL LVRLLLEMRLPSIRKS V+
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
XP_023923484.1 uncharacterized protein LOC112034895 isoform X1 [Quercus suber]5.2e-0478.79Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
        +KV P VETGYENL LVRLLLEMR+PSI+KS V
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
XP_030489995.1 uncharacterized protein LOC115706475 [Cannabis sativa]5.2e-0481.82Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
        F V P VETGYENL LVRLLLEMR+PSIRKS V
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
TrEMBL top hitse value%identityAlignment
A0A1R3JZW1 Uncharacterized protein2.5e-0457.14Show/hide
Query:  DQNLLHSCGGLTFLRVEGKELENFKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
        D  L  SCG           L   KV P VETGYENL LVRLLLEMR+P+IRKS V
Subjt:  DQNLLHSCGGLTFLRVEGKELENFKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
A0A438JMB6 Uncharacterized protein1.5e-0479.41Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
        F + P VETGYENL LVRLLLEMRLPSIRKS V+
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
A0A7J6GUU0 Uncharacterized protein2.5e-0481.82Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
        F V P VETGYENL LVRLLLEMR+PSIRKS V
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLV
A5BY58 Uncharacterized protein1.5e-0479.41Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
        F + P VETGYENL LVRLLLEMRLPSIRKS V+
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
D7UCC8 Uncharacterized protein1.5e-0479.41Show/hide
Query:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
        F + P VETGYENL LVRLLLEMRLPSIRKS V+
Subjt:  FKVNPAVETGYENLALVRLLLEMRLPSIRKSLVI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G45990.1 unknown protein2.0e-0677.42Show/hide
Query:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
        V P VETGYENL LVRLLLE ++PSIRKS V
Subjt:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
AT2G45990.2 unknown protein2.0e-0677.42Show/hide
Query:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
        V P VETGYENL LVRLLLE ++PSIRKS V
Subjt:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
AT2G45990.3 unknown protein2.0e-0677.42Show/hide
Query:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
        V P VETGYENL LVRLLLE ++PSIRKS V
Subjt:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
AT2G45990.4 unknown protein2.0e-0677.42Show/hide
Query:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV
        V P VETGYENL LVRLLLE ++PSIRKS V
Subjt:  VNPAVETGYENLALVRLLLEMRLPSIRKSLV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTATTCTCTTGTGCTGACTGCTGGTGACCAAAATTTACTTCATTCATGTGGTGGATTGACATTTCTTCGAGTAGAGGGCAAAGAACTTGAAAATTTCAAGGTCAA
CCCTGCGGTTGAGACTGGATATGAAAATTTAGCGTTGGTGAGGTTGCTATTGGAGATGAGATTACCTTCAATTAGGAAGTCTTTGGTGATATGTGCCCACAGGCCACAAC
TCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTATTCTCTTGTGCTGACTGCTGGTGACCAAAATTTACTTCATTCATGTGGTGGATTGACATTTCTTCGAGTAGAGGGCAAAGAACTTGAAAATTTCAAGGTCAA
CCCTGCGGTTGAGACTGGATATGAAAATTTAGCGTTGGTGAGGTTGCTATTGGAGATGAGATTACCTTCAATTAGGAAGTCTTTGGTGATATGTGCCCACAGGCCACAAC
TCTAG
Protein sequenceShow/hide protein sequence
MGYSLVLTAGDQNLLHSCGGLTFLRVEGKELENFKVNPAVETGYENLALVRLLLEMRLPSIRKSLVICAHRPQL