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Lcy06g013660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:21348754..21350985
RNA-Seq ExpressionLcy06g013660
SyntenyLcy06g013660
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]9.0e-2741.51Show/hide
Query:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDT-RTLKHKRPRRFEEVW
        +S M+ F++T+D C +   GF G  FTWC+ H     IWERLDRFLIN  +       ++ HL   +SDHRP+LAEW      T    K +RP RFEE W
Subjt:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDT-RTLKHKRPRRFEEVW

Query:  TKYEDCREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
          +++C+EIV++ W +           K+  CL +L +W+  +  GS+RGAI RKE EI
Subjt:  TKYEDCREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]1.1e-2133.33Show/hide
Query:  RALEFDNGINVPSMGLSGGLMLQWSNEES--------GMREFRETIDACEVFYLGFSGPKFTW-------------------------------------
        R L FD  ++V S G SGGLML W+++ +        G  +   T       + GF G   T+                                     
Subjt:  RALEFDNGINVPSMGLSGGLMLQWSNEES--------GMREFRETIDACEVFYLGFSGPKFTW-------------------------------------

Query:  --CNNHDN-HGL-IWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYEDCREIVKQAWTISERGGRLSL
          C N     G  IWERLDRFLIN +M N+C   KV HL + SSDHRP+LA W  E P   T   +R  RFEE W + + CR+I+   W      G  + 
Subjt:  --CNNHDN-HGL-IWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYEDCREIVKQAWTISERGGRLSL

Query:  VDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
          K+  CLS+L++W++ +   S++GAIA KE E+
Subjt:  VDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

XP_030923315.1 uncharacterized protein LOC115950217 [Quercus lobata]2.8e-2035.95Show/hide
Query:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE
        M EFR+ +D C    LG+ G KFTWCN H+    +WERLDR +      +     KV+HL   +SDH+P++      P      +  +P RFE++W K E
Subjt:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE

Query:  DCREIVKQAWTISERGGRLSLVD-KLGRCLSQLDQWSRRKYKGSIRGAIARKE
         CRE+++ AW+   +G  +S V+ K+ RC   L  WS+  +    R    +KE
Subjt:  DCREIVKQAWTISERGGRLSLVD-KLGRCLSQLDQWSRRKYKGSIRGAIARKE

XP_030939568.1 uncharacterized protein LOC115964386 [Quercus lobata]1.3e-2039.1Show/hide
Query:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWT
        E  MREFRE +D C    LGF G  FTWCNN  + G+ W RLDR +  P+        +V H+A S  DH PL     +E  + R  K  RP RFE  W 
Subjt:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWT

Query:  KYEDCREIVKQAWTISERGGRL-SLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKE
        K E C  ++KQAW     G  +  ++ K+  C + L  WSR  + G+IR  + +K+
Subjt:  KYEDCREIVKQAWTISERGGRL-SLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKE

XP_042950217.1 uncharacterized protein LOC122282324 [Carya illinoinensis]6.2e-2038.41Show/hide
Query:  SNEESG-MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFE
        SN   G M +FRET+  C +F LGFSG +FTW NN +      ERLDR   N    N    F V HL  S SDH P++ +   + P   T K  +  RFE
Subjt:  SNEESG-MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFE

Query:  EVWTKYEDCREIVKQAWTISER--GGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
          WT+ E C EI+K+ W  S R     +S +  L  C  +L  WSR   +G  +G + +++SE+
Subjt:  EVWTKYEDCREIVKQAWTISER--GGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

TrEMBL top hitse value%identityAlignment
A0A2N9F7C1 Uncharacterized protein3.0e-2037.65Show/hide
Query:  SNEESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPR----
        +  ES M+ FR  ID C    LGF G  FTWCNN       W RLDRF+       R S   V H+  S+SDH+P+         +T  ++  RPR    
Subjt:  SNEESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPR----

Query:  RFEEVWTKYEDCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYKGSIRGAIARK
        RFE++W  + DC  +V QAW    RG  L+ V  K+ RC  +L +WSR ++ G+I   +  K
Subjt:  RFEEVWTKYEDCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYKGSIRGAIARK

A0A2N9H1U1 Reverse transcriptase domain-containing protein5.5e-2239.1Show/hide
Query:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE
        M++FR+ ID C    LG+ GP FTWCNN  + G +WERLDR L      N     ++ HL  ++SDH P+    K  P  T      RP RFEEVW    
Subjt:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE

Query:  DCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
         CRE V  AW   + G  +  V DK+  C  +L +WSR K+ G+I   +  K +++
Subjt:  DCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

A0A2N9HW04 Reverse transcriptase domain-containing protein5.5e-2240.85Show/hide
Query:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE
        M++FR+ ID C    LG+ GP FTWCNN  + G +WERLDR L      N     ++ HL  ++SDH P+    K  P  T      RP RFEEVW    
Subjt:  MREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYE

Query:  DCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYK
         CRE V  AW   + G  +  V DK+  C  +L +WSR K++
Subjt:  DCREIVKQAWTISERGGRLSLV-DKLGRCLSQLDQWSRRKYK

A0A6J1DRA0 uncharacterized protein LOC1110224234.4e-2741.51Show/hide
Query:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDT-RTLKHKRPRRFEEVW
        +S M+ F++T+D C +   GF G  FTWC+ H     IWERLDRFLIN  +       ++ HL   +SDHRP+LAEW      T    K +RP RFEE W
Subjt:  ESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDT-RTLKHKRPRRFEEVW

Query:  TKYEDCREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
          +++C+EIV++ W +           K+  CL +L +W+  +  GS+RGAI RKE EI
Subjt:  TKYEDCREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

A0A6J1DUG8 uncharacterized protein LOC1110241355.5e-2233.33Show/hide
Query:  RALEFDNGINVPSMGLSGGLMLQWSNEES--------GMREFRETIDACEVFYLGFSGPKFTW-------------------------------------
        R L FD  ++V S G SGGLML W+++ +        G  +   T       + GF G   T+                                     
Subjt:  RALEFDNGINVPSMGLSGGLMLQWSNEES--------GMREFRETIDACEVFYLGFSGPKFTW-------------------------------------

Query:  --CNNHDN-HGL-IWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYEDCREIVKQAWTISERGGRLSL
          C N     G  IWERLDRFLIN +M N+C   KV HL + SSDHRP+LA W  E P   T   +R  RFEE W + + CR+I+   W      G  + 
Subjt:  --CNNHDN-HGL-IWERLDRFLINPTMQNRCSMFKVLHLAMSSSDHRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYEDCREIVKQAWTISERGGRLSL

Query:  VDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI
          K+  CLS+L++W++ +   S++GAIA KE E+
Subjt:  VDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACCAAAATGAGAGGAAATGGTGGAGATGGTTTGATAAGAGCTTTGGAGTTTGATAATGGGATCAACGTGCCTAGCATGGGGCTTAGCGGTGGGTTGATGCTCCA
GTGGTCAAATGAGGAGTCGGGTATGAGAGAGTTTCGAGAGACTATTGATGCTTGTGAGGTTTTTTATCTGGGGTTCAGTGGTCCAAAATTTACTTGGTGCAATAACCATG
ATAATCACGGACTTATATGGGAGAGACTTGATCGTTTCCTTATTAACCCGACTATGCAAAACCGATGTAGCATGTTCAAGGTGCTTCACCTTGCTATGAGTTCGTCGGAT
CATAGACCACTCCTGGCAGAATGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGCAG
GGAGATCGTTAAGCAAGCTTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTGGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAGT
ACAAGGGCTCCATTAGGGGAGCTATAGCTAGAAAGGAAAGTGAAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAACCAAAATGAGAGGAAATGGTGGAGATGGTTTGATAAGAGCTTTGGAGTTTGATAATGGGATCAACGTGCCTAGCATGGGGCTTAGCGGTGGGTTGATGCTCCA
GTGGTCAAATGAGGAGTCGGGTATGAGAGAGTTTCGAGAGACTATTGATGCTTGTGAGGTTTTTTATCTGGGGTTCAGTGGTCCAAAATTTACTTGGTGCAATAACCATG
ATAATCACGGACTTATATGGGAGAGACTTGATCGTTTCCTTATTAACCCGACTATGCAAAACCGATGTAGCATGTTCAAGGTGCTTCACCTTGCTATGAGTTCGTCGGAT
CATAGACCACTCCTGGCAGAATGGAAAGAAGAGCCACCTGATACCAGAACTCTCAAACATAAACGGCCTAGGCGATTCGAGGAAGTTTGGACAAAATATGAGGATTGCAG
GGAGATCGTTAAGCAAGCTTGGACTATATCTGAGAGAGGCGGCAGACTTTCTCTAGTTGATAAGCTGGGGAGATGCCTAAGTCAGTTAGACCAGTGGAGCAGACGAAAGT
ACAAGGGCTCCATTAGGGGAGCTATAGCTAGAAAGGAAAGTGAAATATAG
Protein sequenceShow/hide protein sequence
METKMRGNGGDGLIRALEFDNGINVPSMGLSGGLMLQWSNEESGMREFRETIDACEVFYLGFSGPKFTWCNNHDNHGLIWERLDRFLINPTMQNRCSMFKVLHLAMSSSD
HRPLLAEWKEEPPDTRTLKHKRPRRFEEVWTKYEDCREIVKQAWTISERGGRLSLVDKLGRCLSQLDQWSRRKYKGSIRGAIARKESEI