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Lcy06g013760 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g013760
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase
Genome locationChr06:21644984..21647471
RNA-Seq ExpressionLcy06g013760
SyntenyLcy06g013760
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6645720.1 hypothetical protein CIPAW_08G141600 [Carya illinoinensis]5.2e-0946.48Show/hide
Query:  EKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEH
        E++G NP+ +SQL  F +  +DCGL+D+ + G  FTWSNR+  ++ +NERLD F+ N A+   F NA V H
Subjt:  EKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEH

MCH84376.1 hypothetical protein [Trifolium medium]2.6e-0833.06Show/hide
Query:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN
        L++    G Y  S H   P   +  +   +    + W  +    N+ + SA EKEGG  +  S    FHN  + C L D+ Y GD FTW+N Q+ E  I 
Subjt:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN

Query:  ERLDIFVVNEAFIQLFSNATVEHL
        ERLD F  + +++  F   T  HL
Subjt:  ERLDIFVVNEAFIQLFSNATVEHL

MCH84377.1 hypothetical protein [Trifolium medium]2.6e-0833.06Show/hide
Query:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN
        L++    G Y  S H   P   +  +   +    + W  +    N+ + SA EKEGG  +  S    FHN  + C L D+ Y GD FTW+N Q+ E  I 
Subjt:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN

Query:  ERLDIFVVNEAFIQLFSNATVEHL
        ERLD F  + +++  F   T  HL
Subjt:  ERLDIFVVNEAFIQLFSNATVEHL

TXG69190.1 hypothetical protein EZV62_004125 [Acer yangbiense]1.5e-0843.37Show/hide
Query:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQS
        E+   +EK GGN   E  +  F  A +DCGL+D+ + G  FTWSNR+D E  I ERLD  V N  ++ LFS  +++HL++ +S
Subjt:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQS

XP_042969011.1 uncharacterized protein LOC122301682 [Carya illinoinensis]2.6e-0839.13Show/hide
Query:  KRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEH
        KRG   A ++     E+    EK+GGNP  ESQ+  F +  ++C L+D+ + G  FTWSNR++    +NERLD F+ N  +   + NA V H
Subjt:  KRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEH

TrEMBL top hitse value%identityAlignment
A0A392M342 Uncharacterized protein4.7e-0842.5Show/hide
Query:  NMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHL
        N+ + SA EKEGG  +  S    FHN  + C L D+ Y GD FTW+N Q+ E  I ERLD F  + +++  F   T  HL
Subjt:  NMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHL

A0A392MA33 Uncharacterized protein (Fragment)1.2e-0833.06Show/hide
Query:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN
        L++    G Y  S H   P   +  +   +    + W  +    N+ + SA EKEGG  +  S    FHN  + C L D+ Y GD FTW+N Q+ E  I 
Subjt:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN

Query:  ERLDIFVVNEAFIQLFSNATVEHL
        ERLD F  + +++  F   T  HL
Subjt:  ERLDIFVVNEAFIQLFSNATVEHL

A0A392MAB2 Uncharacterized protein (Fragment)1.2e-0833.06Show/hide
Query:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN
        L++    G Y  S H   P   +  +   +    + W  +    N+ + SA EKEGG  +  S    FHN  + C L D+ Y GD FTW+N Q+ E  I 
Subjt:  LQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQIN

Query:  ERLDIFVVNEAFIQLFSNATVEHL
        ERLD F  + +++  F   T  HL
Subjt:  ERLDIFVVNEAFIQLFSNATVEHL

A0A5C7IIT4 Uncharacterized protein7.3e-0943.37Show/hide
Query:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQS
        E+   +EK GGN   E  +  F  A +DCGL+D+ + G  FTWSNR+D E  I ERLD  V N  ++ LFS  +++HL++ +S
Subjt:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQS

A0A803LPN5 Uncharacterized protein6.2e-0830.77Show/hide
Query:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQSTVDNRFRSVVHFTVVPA
        E+ S+ EKEGG   RE  +Q F +A +DC L+DM + G  +TW   +  E  I ERLD F+ +EA+  +F  A V+H+    S       S         
Subjt:  EMGSATEKEGGNPVRESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQSTVDNRFRSVVHFTVVPA

Query:  LEPPSNVQIWCYGS----------WTFRSGAVKRSVLVWCRSS
           P   + W   S          W   + A+    + WC SS
Subjt:  LEPPSNVQIWCYGS----------WTFRSGAVKRSVLVWCRSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTGGGGCCGAGAATCAAGCTGTGGAGCGGAAGGTATCAGTTACGAATTTTAATGGTACCAACGGTTTCTCCTTCAATCAAGACAATGAAGGAGACTTCTACGCA
ACTAGTTTCTCAAAGAAAAGACTCGGTCAATGGCCCTTTACAGAATGGGCCAATGGTTGGGTTTTATTCCCTCTCAAATCATAGTGGTGGGCCGAATATATCAAATGGGC
CATCGAAATTTAATGAAGACAAACGTGGTGATGAATGGGCCAAAATGCTTGAACAAGCCAATATGGAGATGGGGTCAGCAACTGAGAAGGAAGGTGGTAACCCAGTTAGA
GAATCTCAACTCCAATGTTTTCACAATGCTACAGATGATTGTGGGCTTCAAGATATGGATTATACGGGTGACATGTTTACTTGGTCAAATAGACAAGACAGAGAATTTCA
AATTAACGAACGTCTTGACATATTCGTAGTGAATGAAGCTTTCATCCAGTTATTTTCGAATGCAACAGTGGAGCACCTGAATTGGGCCCAATCTACAGTCGACAATCGTT
TCAGATCTGTTGTTCATTTCACCGTCGTGCCTGCACTAGAACCGCCGTCAAACGTTCAGATCTGGTGTTATGGGTCGTGGACGTTCAGATCTGGTGCCGTCAAACGTTCA
GTTCTGGTATGGTGTCGATCTTCACGCTTCAGATCTCCCCCTCTCTCATCTCCAATCAACGAGCTTCAGTGGGCGTCTTCCACAAGCTTCAGAGGGCGGCGTTCTCGTGC
GGACAGATTGGTGGCAACAAATCTTCAAAAAACGACTTTGGGGGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTTGGGGCCGAGAATCAAGCTGTGGAGCGGAAGGTATCAGTTACGAATTTTAATGGTACCAACGGTTTCTCCTTCAATCAAGACAATGAAGGAGACTTCTACGCA
ACTAGTTTCTCAAAGAAAAGACTCGGTCAATGGCCCTTTACAGAATGGGCCAATGGTTGGGTTTTATTCCCTCTCAAATCATAGTGGTGGGCCGAATATATCAAATGGGC
CATCGAAATTTAATGAAGACAAACGTGGTGATGAATGGGCCAAAATGCTTGAACAAGCCAATATGGAGATGGGGTCAGCAACTGAGAAGGAAGGTGGTAACCCAGTTAGA
GAATCTCAACTCCAATGTTTTCACAATGCTACAGATGATTGTGGGCTTCAAGATATGGATTATACGGGTGACATGTTTACTTGGTCAAATAGACAAGACAGAGAATTTCA
AATTAACGAACGTCTTGACATATTCGTAGTGAATGAAGCTTTCATCCAGTTATTTTCGAATGCAACAGTGGAGCACCTGAATTGGGCCCAATCTACAGTCGACAATCGTT
TCAGATCTGTTGTTCATTTCACCGTCGTGCCTGCACTAGAACCGCCGTCAAACGTTCAGATCTGGTGTTATGGGTCGTGGACGTTCAGATCTGGTGCCGTCAAACGTTCA
GTTCTGGTATGGTGTCGATCTTCACGCTTCAGATCTCCCCCTCTCTCATCTCCAATCAACGAGCTTCAGTGGGCGTCTTCCACAAGCTTCAGAGGGCGGCGTTCTCGTGC
GGACAGATTGGTGGCAACAAATCTTCAAAAAACGACTTTGGGGGTCTAG
Protein sequenceShow/hide protein sequence
MILGPRIKLWSGRYQLRILMVPTVSPSIKTMKETSTQLVSQRKDSVNGPLQNGPMVGFYSLSNHSGGPNISNGPSKFNEDKRGDEWAKMLEQANMEMGSATEKEGGNPVR
ESQLQCFHNATDDCGLQDMDYTGDMFTWSNRQDREFQINERLDIFVVNEAFIQLFSNATVEHLNWAQSTVDNRFRSVVHFTVVPALEPPSNVQIWCYGSWTFRSGAVKRS
VLVWCRSSRFRSPPLSSPINELQWASSTSFRGRRSRADRLVATNLQKTTLGV