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Lcy06g014190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L7a
Genome locationChr06:26715057..26720022
RNA-Seq ExpressionLcy06g014190
SyntenyLcy06g014190
Gene Ontology termsGO:0042254 - ribosome biogenesis (biological process)
GO:0005840 - ribosome (cellular component)
GO:1990904 - ribonucleoprotein complex (cellular component)
InterPro domainsIPR004038 - Ribosomal protein L7Ae/L30e/S12e/Gadd45
IPR018492 - Ribosomal protein L7Ae/L8/Nhp2 family
IPR029064 - 50S ribosomal protein L30e-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579662.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1150Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

KAG6579663.1 60S ribosomal protein L7a-2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1150Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

XP_022156496.1 60S ribosomal protein L7a-1 [Momordica charantia]1.6e-1150Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

XP_022928907.1 60S ribosomal protein L7a-2 isoform X2 [Cucurbita moschata]1.6e-1150Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

XP_022970188.1 60S ribosomal protein L7a-2-like [Cucurbita maxima]1.3e-1151.02Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IVIK GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ6 60S ribosomal protein L7a7.9e-1250Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

A0A5D3DB00 60S ribosomal protein L7a7.9e-1250Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

A0A6J1HZX8 60S ribosomal protein L7a7.9e-1250Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

A0A6J1I354 60S ribosomal protein L7a6.1e-1251.02Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IVIK GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

A0A6J1K385 60S ribosomal protein L7a7.9e-1250Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +   ++L   +   + Q  + L  RA EE EGKSHDAK+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

SwissProt top hitse value%identityAlignment
P0DJ14 60S ribosomal protein L7a4.8e-0635.51Show/hide
Query:  YGSLSPPKISPLSRIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVH
        Y +L   K   L R+ +P  I +   +L ++ + S++  +L+     +  +    L  +A  + +GK  + K+ IV+K GLNH+T LIE  +A LVVI H
Subjt:  YGSLSPPKISPLSRIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVH

Query:  DVDPIQL
        DVDPI+L
Subjt:  DVDPIQL

P0DKK7 60S ribosomal protein L7a-21.0e-1169.81Show/hide
Query:  RAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        RA  E EGK+ +AK+ IV+K GLNHVTYLIEQ+KA LVVI HDVDPI+L  WL
Subjt:  RAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

P35685 60S ribosomal protein L7a-11.0e-1169.81Show/hide
Query:  RAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        RA  E EGK+ +AK+ IV+K GLNHVTYLIEQ+KA LVVI HDVDPI+L  WL
Subjt:  RAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

P49692 60S ribosomal protein L7a-11.4e-1043.88Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +S+  +L   +   +    + L  +A  E EGK  ++K+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

Q9LZH9 60S ribosomal protein L7a-21.4e-1044.9Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  S   ++L      +  +   LL  +A  E EGK  ++K+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

Arabidopsis top hitse value%identityAlignment
AT2G47610.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.0e-1143.88Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  +S+  +L   +   +    + L  +A  E EGK  ++K+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL

AT3G62870.1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein1.0e-1144.9Show/hide
Query:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL
        R+ +P ++ +   +L ++L  S   ++L      +  +   LL  +A  E EGK  ++K+ IV+K GLNHVTYLIEQNKA LVVI HDVDPI+L  WL
Subjt:  RIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQTCDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQL-SWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAATATATATGTGTACAACGTATAGAAAATACAGTGTATGTGTATGGAATATAGGAAAAAATACAATGTATGTGTATGGAAATGTAGGAAATACAGTGTTTAGGAA
AATGGAATATAGGAAGAAATACAATGGGCAATTATGTAATATTGGTTTACTAAGTAGGGCAACTTACGGGTCTCTTTCTCCCCCAAAAATTTCCCCTCTCTCTCGAATCC
CTCTTCCTCTCTCGATTACCCGCCGACTTCCTTCCCTTCTACGATCTCTCACGCCGTCCTCCGTAGTCCTCATTTTGAGCATCGTCCAGCGAGTCCAGCAGCGCCAGACT
TGTGATCTTCTTCCCTTCCGAGCTCACGAAGAGACTGAAGGCAAATCACACGATGCCAAAGAGCTTATTGTTATTAAATGTGGTCTCAACCATGTTACCTACCTCATTGA
GCAGAATAAGGCATATCTTGTTGTGATTGTACATGATGTGGATCCGATCCAATTGAGTTGGTTGTTTGGCTCCCAGCTTTATGTAGGAAGATGGAAATTTCAAATTGCAT
TGGGAAGGGAAAAACACGTTTGGGAGCGATTTGTTGTTCCTATGCATCGTCAATGGCTTCAAGTACAAGTTGCACCACGTTCAATCAACCTTCAAAGAGTTATGAGCCCC
AAATTCCTTCGCCATTGTTATATAAATTCTACCATAGACGAGTTCAAATTCGAAACTAGCATTCGTTTCAATCTCAACGACATCAATTTCGATCTAGACGATCGAACAAA
GAAACACAACAAGCAACGAATGCAAAGCGAAGTTGAATTTTTACATGTGATGATGGAAAGGTCCTTCTGCTTCCTCCTTGACTCAAAATTCCACCGCCTCATGAAAGTTG
CAATGAAAATCGCAGTGGCAAAAGCTCCAAACTCGATTTAA
mRNA sequenceShow/hide mRNA sequence
TGCACAACAATGACATATTCTTAAATTAATTCAACATAATTAGAAGTGAATATGGTCCACGCCATGAATGAAAGCGTATGTGCAATCTAGAAGAATAAAATACAGTGTAA
ATTAAAAAATCCATTCGGTATTGGAAATTCCCAACACAATGATTTGACTTGACAATCGTTTAGCAACGTTGGCAGTGTATGTGCCTGCAAATGACTTAACATGTTAATAT
ATATGTGTACAACGTATAGAAAATACAGTGTATGTGTATGGAATATAGGAAAAAATACAATGTATGTGTATGGAAATGTAGGAAATACAGTGTTTAGGAAAATGGAATAT
AGGAAGAAATACAATGGGCAATTATGTAATATTGGTTTACTAAGTAGGGCAACTTACGGGTCTCTTTCTCCCCCAAAAATTTCCCCTCTCTCTCGAATCCCTCTTCCTCT
CTCGATTACCCGCCGACTTCCTTCCCTTCTACGATCTCTCACGCCGTCCTCCGTAGTCCTCATTTTGAGCATCGTCCAGCGAGTCCAGCAGCGCCAGACTTGTGATCTTC
TTCCCTTCCGAGCTCACGAAGAGACTGAAGGCAAATCACACGATGCCAAAGAGCTTATTGTTATTAAATGTGGTCTCAACCATGTTACCTACCTCATTGAGCAGAATAAG
GCATATCTTGTTGTGATTGTACATGATGTGGATCCGATCCAATTGAGTTGGTTGTTTGGCTCCCAGCTTTATGTAGGAAGATGGAAATTTCAAATTGCATTGGGAAGGGA
AAAACACGTTTGGGAGCGATTTGTTGTTCCTATGCATCGTCAATGGCTTCAAGTACAAGTTGCACCACGTTCAATCAACCTTCAAAGAGTTATGAGCCCCAAATTCCTTC
GCCATTGTTATATAAATTCTACCATAGACGAGTTCAAATTCGAAACTAGCATTCGTTTCAATCTCAACGACATCAATTTCGATCTAGACGATCGAACAAAGAAACACAAC
AAGCAACGAATGCAAAGCGAAGTTGAATTTTTACATGTGATGATGGAAAGGTCCTTCTGCTTCCTCCTTGACTCAAAATTCCACCGCCTCATGAAAGTTGCAATGAAAAT
CGCAGTGGCAAAAGCTCCAAACTCGATTTAA
Protein sequenceShow/hide protein sequence
MLIYMCTTYRKYSVCVWNIGKNTMYVYGNVGNTVFRKMEYRKKYNGQLCNIGLLSRATYGSLSPPKISPLSRIPLPLSITRRLPSLLRSLTPSSVVLILSIVQRVQQRQT
CDLLPFRAHEETEGKSHDAKELIVIKCGLNHVTYLIEQNKAYLVVIVHDVDPIQLSWLFGSQLYVGRWKFQIALGREKHVWERFVVPMHRQWLQVQVAPRSINLQRVMSP
KFLRHCYINSTIDEFKFETSIRFNLNDINFDLDDRTKKHNKQRMQSEVEFLHVMMERSFCFLLDSKFHRLMKVAMKIAVAKAPNSI