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Lcy06g014200 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014200
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein .
Genome locationChr06:26728110..26730950
RNA-Seq ExpressionLcy06g014200
SyntenyLcy06g014200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8009525.1 hypothetical protein BT93_J0510 [Corymbia citriodora subsp. variegata]2.8e-1866.34Show/hide
Query:  MAASVALRSSCLRAIGRIT--TSSATRNVSVS-SVLPSVRSSFVSPRTSISPHP-LRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSP
        MAASVA RS+ LRAI R T  T+S+T   +VS S  PS+R +F  PR  ISP P  RL+RRELSSL PVHSAIASACLVS+LP+E ++SVEGRF NYLSP
Subjt:  MAASVALRSSCLRAIGRIT--TSSATRNVSVS-SVLPSVRSSFVSPRTSISPHP-LRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSP

Query:  I
        I
Subjt:  I

XP_022152888.1 uncharacterized protein LOC111020511 [Momordica charantia]2.0e-3290.72Show/hide
Query:  AASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        +ASVALRSSCLRAI RI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H LRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
Subjt:  AASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

XP_022937479.1 uncharacterized protein LOC111443881 [Cucurbita moschata]2.2e-3490.72Show/hide
Query:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEASASV+GRFVNYLSPI
Subjt:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

XP_022969556.1 uncharacterized protein LOC111468540 [Cucurbita maxima]1.1e-3388.66Show/hide
Query:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEASASV+GRFVNYLSPI
Subjt:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

XP_030957939.1 uncharacterized protein LOC115979952 [Quercus lobata]2.4e-1765.66Show/hide
Query:  MAASVALRSSCLRAIGR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAASVA RS+ +RA  R  ++ SSATR  S    LP   S+FV  R+  S  PLRLLRRELSSL+PVHSAIASACLVS+LP+EAS S EGRF NYLSPI
Subjt:  MAASVALRSSCLRAIGR--ITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

TrEMBL top hitse value%identityAlignment
A0A2I4FNG1 uncharacterized protein LOC109000686 isoform X13.8e-1663.73Show/hide
Query:  MAASVAL-RSSCLRAIGRIT--TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPL--RLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLS
        MAASVA  RS+ +RAI R +  +SS TR+ SV    P   S+ V  RT I PHPL  RLLRR+LSSL+PVHSA+ASACLVS+LP+EAS S EG+FVNYLS
Subjt:  MAASVAL-RSSCLRAIGRIT--TSSATRNVSVSSVLPSVRSSFVSPRTSISPHPL--RLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLS

Query:  PI
        PI
Subjt:  PI

A0A6J0ZX22 uncharacterized protein LOC1104126691.4e-1559.18Show/hide
Query:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPL-RLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAA++A RSS LR I R TT++ TR +  S   PS+RS+F   +T ISP  L RL+RRELS+L+PVHSA+ASACLVS+LP +A +  EGRF NY+SPI
Subjt:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPL-RLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

A0A6J1DG34 uncharacterized protein LOC1110205119.8e-3390.72Show/hide
Query:  AASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        +ASVALRSSCLRAI RI+TSSA RNVSVSSVLPS+RSSFV  RTSISP H LRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
Subjt:  AASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISP-HPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

A0A6J1FBA6 uncharacterized protein LOC1114438811.0e-3490.72Show/hide
Query:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAASVALRSSCLRAI RI+T SA RNVSVSSVLPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEASASV+GRFVNYLSPI
Subjt:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

A0A6J1HY48 uncharacterized protein LOC1114685405.2e-3488.66Show/hide
Query:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI
        MAASVALRSSCLRAI RI+T+S+ RNVSVSS LPSVRSSFVS R SISPH LRLLRRELSSLRP+HSAIASACLVSELPAEASASV+GRFVNYLSPI
Subjt:  MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27775.1 FUNCTIONS IN: molecular_function unknown6.1e-1149.02Show/hide
Query:  AASVALRSSC-LRAIGRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLS
        A  +A RS+  +R+I R  T+   RN+  S   PSV   +F SPR    + I     RLLRRELS+ +P HS IA+ACLVS+LP++ + S EGRF NYLS
Subjt:  AASVALRSSC-LRAIGRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLS

Query:  PI
        PI
Subjt:  PI

AT2G27775.2 FUNCTIONS IN: molecular_function unknown1.0e-0543.82Show/hide
Query:  AASVALRSSC-LRAIGRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASA
        A  +A RS+  +R+I R  T+   RN+  S   PSV   +F SPR    + I     RLLRRELS+ +P HS IA+ACLVS+LP++ ++
Subjt:  AASVALRSSC-LRAIGRITTSSATRNVSVSSVLPSV-RSSFVSPR----TSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTTCAGTTGCACTCAGATCGTCGTGTCTGCGAGCAATTGGTAGAATAACGACCAGTTCCGCCACCAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCG
TTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGCTGTTGCGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCC
TTGTTTCTGAGCTGCCCGCCGAAGCCAGCGCCTCCGTAGAAGGTAGATTTGTGAACTATCTCAGTCCTATCTAG
mRNA sequenceShow/hide mRNA sequence
GTTCGGGGATTTTGGGGAGGTTTTAGGGTTCGGAGTTGAGAGAATTCAGTCGGAAATGGCAGCTTCAGTTGCACTCAGATCGTCGTGTCTGCGAGCAATTGGTAGAATAA
CGACCAGTTCCGCCACCAGAAATGTCTCCGTTTCATCGGTGCTTCCTTCGGTGCGTTCAAGTTTCGTTTCTCCAAGGACTTCAATTTCCCCTCACCCTCTAAGGCTGTTG
CGACGAGAATTGAGCTCTCTTCGACCTGTTCATAGCGCAATTGCCTCCGCCTGCCTTGTTTCTGAGCTGCCCGCCGAAGCCAGCGCCTCCGTAGAAGGTAGATTTGTGAA
CTATCTCAGTCCTATCTAGCACCAAATGCTTTTAGAGATGCAGAGTTCTCTTCTTGTGTATTAGATTGCCAGCAACACTTCATAACGTCTTCTGCTATTGATTATGAAGA
CAGGGTTTCTTCGGTTCCTCGAGTTGAATTTTACTGATGAAGTATATTTATATTACATTAAGCAGCCAATTTTGCTATAACTTGATAGTCTCCCTTTTATCATTTTTCTG
TTCCAAGCTCCGGGTGACACCCTTAATTGGTCAAACTACAACCAGATATTTTCTGATCCAGATATCGCTTTATATCAAAACTAGAATGTGAATGTGTTGAAATTAGATAG
AGATGATTATATCAGAATAGGGATGAATTTTACTTACCATAAAAAGTGATAGTCAGATTTAAAATATTATCTAGTTATTGGAGCCAGTGAAAAAGGTAAAATACTCCGAG
AGAATGAGATCAAACCATGGGATCAACGTGTCTTGGTTTTAAATCCTACAAGTTTCCTTGATAATTAGATGTAGCATGGTTATATAGTTGTTAGGTGAGATTAGTTGAGG
TGTACTTTCCAGGATACTCCCAAATATCAAAATTGAAAAAAGAAAAAAAGT
Protein sequenceShow/hide protein sequence
MAASVALRSSCLRAIGRITTSSATRNVSVSSVLPSVRSSFVSPRTSISPHPLRLLRRELSSLRPVHSAIASACLVSELPAEASASVEGRFVNYLSPI