; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g014400 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014400
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:27706763..27707602
RNA-Seq ExpressionLcy06g014400
SyntenyLcy06g014400
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.7e-2441.41Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV
        FNQA++AK  WRL++ PNS +A V++ RY+ +    NA VGSNPS  WR+I+W   + K+ +RWR+GDGK++ + +D W+       P+  K       V
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV

Query:  VDLLDRDGNWREDLVHNAFSKEDADVIL
         DL+D +  WR D +   F KED + IL
Subjt:  VDLLDRDGNWREDLVHNAFSKEDADVIL

XP_021808571.1 uncharacterized protein LOC110752263 [Prunus avium]1.1e-2237.35Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYK-GKR
        FNQA+LAK  WR+  NPNS  A + R RYF  G  L+A VG  PS  WR+++W R L    +RWRVG+G +I I +D W+  L + + +          R
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYK-GKR

Query:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFW-----GCKD-----WLEC
        V DL++  G+W  +LV+ +F K +AD +LS P   +   ++  + + W     GC       WL C
Subjt:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFW-----GCKD-----WLEC

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]9.0e-2842.95Show/hide
Query:  MFNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKR
        +FNQAMLAK SWR+L++P+S +A  LRG+YF  G  L A +G+ PS  WR+I+W R LFK+  RW+VG+G  I +  DPWL   GN  PV+     +   
Subjt:  MFNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKR

Query:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG
        V  L++  G W E  V  +F   +AD+IL TP      + +  + I WG
Subjt:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG

XP_024038343.1 uncharacterized protein LOC112097373 [Citrus clementina]6.6e-2339.01Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV
        FNQA++AK  WR+L+ P+S VA +L+ RYF   D +NA +GSNPS  WR+I+W R +  +  +WR+G+G+ I + ++ WL       P+          V
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV

Query:  VDLLDRDGNWREDLVHNAFSKEDADVI--LSTPRSRMKGNV
         +L++ D  W E L+H  F+K DA+ I  +  PR  MK  V
Subjt:  VDLLDRDGNWREDLVHNAFSKEDADVI--LSTPRSRMKGNV

XP_042941372.1 uncharacterized protein LOC122276027 [Carya illinoinensis]6.0e-2443.42Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL---HSLGNRYPVWV-KEEYK
        FN A+LAK  WR ++NP+S  A V + +YF D D LN+ VG  PS  WR I  +  L KE +RWRVG+GK+I I +D W+    S   + P+ + +EE K
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL---HSLGNRYPVWV-KEEYK

Query:  GKRVVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG
         + ++   D+ G W+ DLV   F KE+A++ILS P SR   N+E  + +FWG
Subjt:  GKRVVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG

TrEMBL top hitse value%identityAlignment
A0A6J1CUD6 uncharacterized protein LOC1110146631.6e-2241.04Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV
        FNQAMLAK SWR+L++P S +   LRG+YF  G  L A +G++PS  WR+I+W R LF++  +WRVG+G  I I  D W+H      PV+         V
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV

Query:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRSR
          L+   G W E  + + F   +A+ IL  P  R
Subjt:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRSR

A0A6J1DRA0 uncharacterized protein LOC1110224234.3e-2842.95Show/hide
Query:  MFNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKR
        +FNQAMLAK SWR+L++P+S +A  LRG+YF  G  L A +G+ PS  WR+I+W R LFK+  RW+VG+G  I +  DPWL   GN  PV+     +   
Subjt:  MFNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKR

Query:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG
        V  L++  G W E  V  +F   +AD+IL TP      + +  + I WG
Subjt:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWG

A0A6P5S4Z4 uncharacterized protein LOC1107522635.5e-2337.35Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYK-GKR
        FNQA+LAK  WR+  NPNS  A + R RYF  G  L+A VG  PS  WR+++W R L    +RWRVG+G +I I +D W+  L + + +          R
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYK-GKR

Query:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFW-----GCKD-----WLEC
        V DL++  G+W  +LV+ +F K +AD +LS P   +   ++  + + W     GC       WL C
Subjt:  VVDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFW-----GCKD-----WLEC

A0A803PJK4 Uncharacterized protein4.2e-2342.86Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV
        +NQA+LAK +WR+L NP+S  + +L+ RYF DG  LNA +GS PS TWR I+W + L +  +RW+VG+G +I    DPWL S  +  P+  K       V
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV

Query:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRS
         +L+D D  W    + + F   D D ILS P S
Subjt:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRS

A0A803PQ30 Uncharacterized protein9.4e-2340.15Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV
        FNQA+LAK +WR+  NP+S ++ VL+ RYF +   L A +G +PS TW+ I W+R L  + +RW+VGDG+ I  D DPW+       P   K    G  V
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRV

Query:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKG
         +L+  +  W   ++H  FS  D D IL+ P S   G
Subjt:  VDLLDRDGNWREDLVHNAFSKEDADVILSTPRSRMKG

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003101.8e-1037.5Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL
        FNQA+LAK S+R++  P++ ++ +LR RYF     +   VG+ PS  WR+II  R L    +   +GDG    +  D W+
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-1736.03Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLH----SLGNRYPVWVKEEYK
        FN A+L K  WR+L  P S +A V + RYF   D LNAP+GS PS  W++I  S+ + ++  R  VG+G+ I I +  WL     S   R      +EY 
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLH----SLGNRYPVWVKEEYK

Query:  G----KRVVDLLDRDG-NWREDLVHNAFSKEDADVI
              +V DL+D  G  WR+D++   F + +  +I
Subjt:  G----KRVVDLLDRDG-NWREDLVHNAFSKEDADVI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.3e-1137.5Show/hide
Query:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL
        FNQA+LAK S+R++  P++ ++ +LR RYF     +   VG+ PS  WR+II  R L    +   +GDG    +  D W+
Subjt:  FNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCAATCAGGCAATGTTGGCTAAACTGAGTTGGAGATTACTTAAAAATCCAAATAGCTTTGTTGCAACAGTGCTTAGGGGTCGGTATTTCAGTGATGGCGAC
TCCCTTAATGCTCCCGTAGGCTCTAATCCATCATCAACTTGGAGAAACATTATTTGGAGCAGAGCTCTGTTTAAAGAAGAGATGAGGTGGAGAGTTGGAGATGGG
AAACGTATTTTTATTGATCAAGATCCCTGGCTTCATAGCCTGGGCAATCGTTATCCTGTTTGGGTGAAGGAGGAGTATAAAGGGAAAAGAGTGGTGGACCTTCTA
GATAGGGATGGGAATTGGCGTGAAGATCTAGTCCATAATGCTTTCTCTAAAGAGGATGCAGACGTGATCCTAAGCACCCCTAGAAGCAGGATGAAGGGCAATGTG
GAGACTACCGAGCACATCTTCTGGGGATGCAAGGATTGGCTGGAGTGCGATGGATTTTTGGGGCTTTGTGTGCAAAAGGATGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTCAATCAGGCAATGTTGGCTAAACTGAGTTGGAGATTACTTAAAAATCCAAATAGCTTTGTTGCAACAGTGCTTAGGGGTCGGTATTTCAGTGATGGCGAC
TCCCTTAATGCTCCCGTAGGCTCTAATCCATCATCAACTTGGAGAAACATTATTTGGAGCAGAGCTCTGTTTAAAGAAGAGATGAGGTGGAGAGTTGGAGATGGG
AAACGTATTTTTATTGATCAAGATCCCTGGCTTCATAGCCTGGGCAATCGTTATCCTGTTTGGGTGAAGGAGGAGTATAAAGGGAAAAGAGTGGTGGACCTTCTA
GATAGGGATGGGAATTGGCGTGAAGATCTAGTCCATAATGCTTTCTCTAAAGAGGATGCAGACGTGATCCTAAGCACCCCTAGAAGCAGGATGAAGGGCAATGTG
GAGACTACCGAGCACATCTTCTGGGGATGCAAGGATTGGCTGGAGTGCGATGGATTTTTGGGGCTTTGTGTGCAAAAGGATGAGTAA
Protein sequenceShow/hide protein sequence
MFNQAMLAKLSWRLLKNPNSFVATVLRGRYFSDGDSLNAPVGSNPSSTWRNIIWSRALFKEEMRWRVGDGKRIFIDQDPWLHSLGNRYPVWVKEEYKGKRVVDLL
DRDGNWREDLVHNAFSKEDADVILSTPRSRMKGNVETTEHIFWGCKDWLECDGFLGLCVQKDE