; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g014440 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014440
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description40S ribosomal protein S13
Genome locationChr06:27755022..27755813
RNA-Seq ExpressionLcy06g014440
SyntenyLcy06g014440
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR000589 - Ribosomal protein S15
IPR009068 - S15/NS1, RNA-binding
IPR023029 - Ribosomal protein S15P


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI20170.1 hypothetical protein PRUPE_2G000700 [Prunus persica]3.0e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL+RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

QHO25128.1 40S ribosomal protein [Arachis hypogaea]2.3e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKFKL+LVESRIHR+TRYYKK+KKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

RYR57364.1 hypothetical protein Ahy_A05g023101 isoform C [Arachis hypogaea]8.0e-2290.32Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKKVVSIRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

RYR72167.1 hypothetical protein Ahy_A02g006378 [Arachis hypogaea]1.8e-2187.3Show/hide
Query:  MGLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        +GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKFKL+LVESRIHR+TRYYKK+KKLP VWK
Subjt:  MGLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

XP_008376455.1 40S ribosomal protein S13-like [Malus domestica]3.0e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL+RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

TrEMBL top hitse value%identityAlignment
A0A314YBZ7 40S ribosomal protein S13-2-like1.5e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL+RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

A0A445D2V6 Uncharacterized protein3.9e-2290.32Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKKVVSIRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

A0A445E9R9 Uncharacterized protein8.6e-2287.3Show/hide
Query:  MGLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        +GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKFKL+LVESRIHR+TRYYKK+KKLP VWK
Subjt:  MGLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

A0A6J5U4E2 Ribosomal_S13_N domain-containing protein1.5e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL+RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

M5XE15 Ribosomal_S13_N domain-containing protein1.5e-2188.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL+RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

SwissProt top hitse value%identityAlignment
P46298 40S ribosomal protein S135.8e-2387.1Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLER RKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

P59223 40S ribosomal protein S13-11.2e-2387.1Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK V+IRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

P59224 40S ribosomal protein S13-21.2e-2387.1Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK V+IRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

P62302 40S ribosomal protein S135.2e-2488.71Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK VSIRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

Q69UI2 40S ribosomal protein S13-18.3e-2282.26Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLY LIKK V+IRKHLERNRKDKDSKF+L+LVESRIHRL RYYK+TKKLP  WK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

Arabidopsis top hitse value%identityAlignment
AT3G60770.1 Ribosomal protein S13/S158.3e-2587.1Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK V+IRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK

AT4G00100.1 ribosomal protein S13A8.3e-2587.1Show/hide
Query:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK
        GLAP+I EDLYHLIKK V+IRKHLERNRKDKDSKF+L+LVESRIHRL RYYKKTKKLP VWK
Subjt:  GLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCTAGCTCCTAAAATCTTGGAAGATCTTTACCATCTCATCAAGAAAGTTGTTTCAATTAGAAAGCATTTGGAGAGAAACAGGAAAGACAAGGATTCCAAG
TTCAAGTTGCTTTTGGTGGAGAGCAGGATCCATCGCCTGACCCGGTATTACAAGAAGACAAAGAAGCTTCCCCTTGTTTGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGCTAGCTCCTAAAATCTTGGAAGATCTTTACCATCTCATCAAGAAAGTTGTTTCAATTAGAAAGCATTTGGAGAGAAACAGGAAAGACAAGGATTCCAAG
TTCAAGTTGCTTTTGGTGGAGAGCAGGATCCATCGCCTGACCCGGTATTACAAGAAGACAAAGAAGCTTCCCCTTGTTTGGAAGTAG
Protein sequenceShow/hide protein sequence
MGLAPKILEDLYHLIKKVVSIRKHLERNRKDKDSKFKLLLVESRIHRLTRYYKKTKKLPLVWK