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Lcy06g014740 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014740
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDUF659 domain-containing protein
Genome locationChr06:30035171..30036927
RNA-Seq ExpressionLcy06g014740
SyntenyLcy06g014740
Gene Ontology termsNA
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN63197.1 hypothetical protein VITISV_035793 [Vitis vinifera]6.4e-3337.18Show/hide
Query:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------
        +M+++C GDI+R  +TRFATNY+AL ++LKKK  LK++F  D W    LSRT+IGKE+ES +  + +W+ V  +V I+E +YT LRIVDSE         
Subjt:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------

Query:  ----------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEI---RDMK----------ARDEKVAYKD---
                                          Y   +G + +L+  VH VF KL P       FG EI   RD K          +R E V   D   
Subjt:  ----------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEI---RDMK----------ARDEKVAYKD---

Query:  DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        +KDY+DL+D+     ++ D+ LFQWVRP HLDD+
Subjt:  DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

RVW58734.1 hypothetical protein CK203_108552 [Vitis vinifera]1.3e-3342.16Show/hide
Query:  MREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFE---------PMYTTLRIVDS--
        MR++C GDI+R  +TRFATNY+ALN++LKKK  LK++F  D W    LS T+IGKE+ES +  + +W+ V  +V I+E         P++     ++   
Subjt:  MREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFE---------PMYTTLRIVDS--

Query:  EYTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        +Y   +G   +L   VH VF KL P       FG EI DM+A  +KVA   +KDY+DL+D+     ++ D+ LFQWVR  HLDD+
Subjt:  EYTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

RVW97523.1 hypothetical protein CK203_058479 [Vitis vinifera]5.6e-3738.1Show/hide
Query:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------
        +MR++C GDI+R G+TRFATNY+AL+++LKKK  LK++F  D W    LSRT+IGK++ES +  + +W+ V  +V I+E +YT LRIVDSE         
Subjt:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------

Query:  -----------------------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKD
                                                       Y   +G   +L+  VH VF KL P       FG EIRDM+A  +KVA   +KD
Subjt:  -----------------------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKD

Query:  YIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        Y+DL+D+     ++ D+ LFQWVRP HLDD+
Subjt:  YIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

RVW98216.1 hypothetical protein CK203_031883 [Vitis vinifera]4.2e-3235.49Show/hide
Query:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRP----------------KQNYLSSTSWRTLMGPRKWSKLSWKMGL--------LSRRRMREICEGDIIR
        MEYK+ME YV  Q++ W   GCTIM DGWT P                KQN +   +       +    L  K  L        L R +MR++C GDI+R
Subjt:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRP----------------KQNYLSSTSWRTLMGPRKWSKLSWKMGL--------LSRRRMREICEGDIIR

Query:  HGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSEYTNELGRSSNLIDVVHRVFMK
         G+TRFATNY+AL+++LKKK  LK++F  D W    LSRT+IGKE+ES +  +        IV I E +   L          +G   +L+  VH+VF K
Subjt:  HGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSEYTNELGRSSNLIDVVHRVFMK

Query:  LFPDCPNAGDFGTEI---RDMKARD----------------------EKVAYKD-----DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        L P       FG EI   RD K                          ++A K+      KDY+DL+D+     ++ +  LFQWVRP HLDD+
Subjt:  LFPDCPNAGDFGTEI---RDMKARD----------------------EKVAYKD-----DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

RVX18949.1 hypothetical protein CK203_006858 [Vitis vinifera]2.5e-3734.94Show/hide
Query:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRPKQNYLSSTSWRTLMGPRKWSKLSWKMGLLSRRRMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLK
        MEYK+ME YV  Q++ W   GCTIM DGWT                GP K S +++         MR++C GDI+R G+TRFATNY+AL+++LKKK  LK
Subjt:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRPKQNYLSSTSWRTLMGPRKWSKLSWKMGLLSRRRMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLK

Query:  RLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE------------------YTNEL----GRSSNLIDVVHRVFMKLF
        ++F  D W    LSRT+IGKE+ES +  + + + V  +V I+E +YT LRIVDSE                  +  E+    G   +L+ VVH VF KL 
Subjt:  RLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE------------------YTNEL----GRSSNLIDVVHRVFMKLF

Query:  PDCPNAGDFGTEI---RDMK----------ARDEKVAY--------------------------------------KDDKDYIDLVDVVANPNDDGDDPL
        P       FG EI   RD K          +R E V                                        K  +  +DL+D+     ++ D+ L
Subjt:  PDCPNAGDFGTEI---RDMK----------ARDEKVAY--------------------------------------KDDKDYIDLVDVVANPNDDGDDPL

Query:  FQWVRPAHLDDD
        FQWVRP HLDD+
Subjt:  FQWVRPAHLDDD

TrEMBL top hitse value%identityAlignment
A0A438FFH0 Uncharacterized protein6.3e-3442.16Show/hide
Query:  MREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFE---------PMYTTLRIVDS--
        MR++C GDI+R  +TRFATNY+ALN++LKKK  LK++F  D W    LS T+IGKE+ES +  + +W+ V  +V I+E         P++     ++   
Subjt:  MREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFE---------PMYTTLRIVDS--

Query:  EYTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        +Y   +G   +L   VH VF KL P       FG EI DM+A  +KVA   +KDY+DL+D+     ++ D+ LFQWVR  HLDD+
Subjt:  EYTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

A0A438ILG1 DUF659 domain-containing protein2.7e-3738.1Show/hide
Query:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------
        +MR++C GDI+R G+TRFATNY+AL+++LKKK  LK++F  D W    LSRT+IGK++ES +  + +W+ V  +V I+E +YT LRIVDSE         
Subjt:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------

Query:  -----------------------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKD
                                                       Y   +G   +L+  VH VF KL P       FG EIRDM+A  +KVA   +KD
Subjt:  -----------------------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKD

Query:  YIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        Y+DL+D+     ++ D+ LFQWVRP HLDD+
Subjt:  YIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

A0A438IND2 Uncharacterized protein2.0e-3235.49Show/hide
Query:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRP----------------KQNYLSSTSWRTLMGPRKWSKLSWKMGL--------LSRRRMREICEGDIIR
        MEYK+ME YV  Q++ W   GCTIM DGWT P                KQN +   +       +    L  K  L        L R +MR++C GDI+R
Subjt:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRP----------------KQNYLSSTSWRTLMGPRKWSKLSWKMGL--------LSRRRMREICEGDIIR

Query:  HGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSEYTNELGRSSNLIDVVHRVFMK
         G+TRFATNY+AL+++LKKK  LK++F  D W    LSRT+IGKE+ES +  +        IV I E +   L          +G   +L+  VH+VF K
Subjt:  HGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSEYTNELGRSSNLIDVVHRVFMK

Query:  LFPDCPNAGDFGTEI---RDMKARD----------------------EKVAYKD-----DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        L P       FG EI   RD K                          ++A K+      KDY+DL+D+     ++ +  LFQWVRP HLDD+
Subjt:  LFPDCPNAGDFGTEI---RDMKARD----------------------EKVAYKD-----DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

A0A438KCK3 DUF659 domain-containing protein1.2e-3734.94Show/hide
Query:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRPKQNYLSSTSWRTLMGPRKWSKLSWKMGLLSRRRMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLK
        MEYK+ME YV  Q++ W   GCTIM DGWT                GP K S +++         MR++C GDI+R G+TRFATNY+AL+++LKKK  LK
Subjt:  MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRPKQNYLSSTSWRTLMGPRKWSKLSWKMGLLSRRRMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLK

Query:  RLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE------------------YTNEL----GRSSNLIDVVHRVFMKLF
        ++F  D W    LSRT+IGKE+ES +  + + + V  +V I+E +YT LRIVDSE                  +  E+    G   +L+ VVH VF KL 
Subjt:  RLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE------------------YTNEL----GRSSNLIDVVHRVFMKLF

Query:  PDCPNAGDFGTEI---RDMK----------ARDEKVAY--------------------------------------KDDKDYIDLVDVVANPNDDGDDPL
        P       FG EI   RD K          +R E V                                        K  +  +DL+D+     ++ D+ L
Subjt:  PDCPNAGDFGTEI---RDMK----------ARDEKVAY--------------------------------------KDDKDYIDLVDVVANPNDDGDDPL

Query:  FQWVRPAHLDDD
        FQWVRP HLDD+
Subjt:  FQWVRPAHLDDD

A5B6M6 BED-type domain-containing protein3.1e-3337.18Show/hide
Query:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------
        +M+++C GDI+R  +TRFATNY+AL ++LKKK  LK++F  D W    LSRT+IGKE+ES +  + +W+ V  +V I+E +YT LRIVDSE         
Subjt:  RMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTDDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSE---------

Query:  ----------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEI---RDMK----------ARDEKVAYKD---
                                          Y   +G + +L+  VH VF KL P       FG EI   RD K          +R E V   D   
Subjt:  ----------------------------------YTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEI---RDMK----------ARDEKVAYKD---

Query:  DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD
        +KDY+DL+D+     ++ D+ LFQWVRP HLDD+
Subjt:  DKDYIDLVDVVANPNDDGDDPLFQWVRPAHLDDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G79740.1 hAT transposon superfamily2.1e-0535.87Show/hide
Query:  MREICEG-DIIRHGSTRFATNYLALNNMLKKKVGLKRLFT--DDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDS
        +R++  G DIIR G TR  +N+L+L +M+K+K  LK +F   + + N +K         +E     N FW  VE  V I EP+   LR V +
Subjt:  MREICEG-DIIRHGSTRFATNYLALNNMLKKKVGLKRLFT--DDSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTACAAGGAAATGGAAGAATATGTCCGTGCACAGCAAAAAGGATGGGACAATCTCGGCTGCACGATCATGTGTGATGGATGGACCAGACCAAAACAAAAC
TATCTATCATCAACTTCATGGCGTACTCTGATGGGTCCGAGAAAGTGGTCCAAATTGTCATGGAAAATGGGTCTGCTTTCAAGAAGGCGGATGCGCGAGATTTGT
GAAGGTGATATAATCCGACATGGGAGCACTAGGTTTGCAACAAACTACCTTGCATTAAATAACATGTTGAAAAAGAAGGTTGGATTAAAACGGTTATTCACTGAT
GATTCATGGAATAATGACAAGTTAAGTCGGACGGTTATAGGAAAAGAGATCGAGTCTCGTGTACTAAGTAACACGTTTTGGGACAATGTAGAGAGCATAGTCCAA
ATTTTTGAGCCAATGTACACAACTCTTCGCATTGTGGACTCCGAGTACACCAATGAGCTTGGACGAAGTTCTAATTTAATTGATGTTGTTCATAGAGTCTTTATG
AAATTATTTCCCGATTGTCCAAATGCTGGAGATTTTGGAACTGAGATCAGAGACATGAAGGCTAGAGATGAAAAAGTAGCATATAAGGACGATAAGGACTACATT
GATTTGGTCGATGTTGTAGCAAATCCAAATGATGACGGTGATGACCCACTTTTTCAATGGGTTCGACCAGCACATCTGGATGACGATCTGGCAATCCAGAGCCTG
GGATTGCCAACATGGCTACAAATACTGGCATCAACGTGGAGAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGTACAAGGAAATGGAAGAATATGTCCGTGCACAGCAAAAAGGATGGGACAATCTCGGCTGCACGATCATGTGTGATGGATGGACCAGACCAAAACAAAAC
TATCTATCATCAACTTCATGGCGTACTCTGATGGGTCCGAGAAAGTGGTCCAAATTGTCATGGAAAATGGGTCTGCTTTCAAGAAGGCGGATGCGCGAGATTTGT
GAAGGTGATATAATCCGACATGGGAGCACTAGGTTTGCAACAAACTACCTTGCATTAAATAACATGTTGAAAAAGAAGGTTGGATTAAAACGGTTATTCACTGAT
GATTCATGGAATAATGACAAGTTAAGTCGGACGGTTATAGGAAAAGAGATCGAGTCTCGTGTACTAAGTAACACGTTTTGGGACAATGTAGAGAGCATAGTCCAA
ATTTTTGAGCCAATGTACACAACTCTTCGCATTGTGGACTCCGAGTACACCAATGAGCTTGGACGAAGTTCTAATTTAATTGATGTTGTTCATAGAGTCTTTATG
AAATTATTTCCCGATTGTCCAAATGCTGGAGATTTTGGAACTGAGATCAGAGACATGAAGGCTAGAGATGAAAAAGTAGCATATAAGGACGATAAGGACTACATT
GATTTGGTCGATGTTGTAGCAAATCCAAATGATGACGGTGATGACCCACTTTTTCAATGGGTTCGACCAGCACATCTGGATGACGATCTGGCAATCCAGAGCCTG
GGATTGCCAACATGGCTACAAATACTGGCATCAACGTGGAGAGAGTAA
Protein sequenceShow/hide protein sequence
MEYKEMEEYVRAQQKGWDNLGCTIMCDGWTRPKQNYLSSTSWRTLMGPRKWSKLSWKMGLLSRRRMREICEGDIIRHGSTRFATNYLALNNMLKKKVGLKRLFTD
DSWNNDKLSRTVIGKEIESRVLSNTFWDNVESIVQIFEPMYTTLRIVDSEYTNELGRSSNLIDVVHRVFMKLFPDCPNAGDFGTEIRDMKARDEKVAYKDDKDYI
DLVDVVANPNDDGDDPLFQWVRPAHLDDDLAIQSLGLPTWLQILASTWRE