; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g014860 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014860
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:30911032..30914130
RNA-Seq ExpressionLcy06g014860
SyntenyLcy06g014860
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015388020.1 uncharacterized protein LOC107177951 [Citrus sinensis]1.9e-4731.25Show/hide
Query:  QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGN
        Q++ KR       +++C  K  G L FRD+  FNQAL+AKQ WRI+  P SL+++++K  YF+ +  M A VG  PSY+W++I+WGRE++ KG+R R+ +
Subjt:  QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGN

Query:  GSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLY
        G  + +++  W+PR  TFK         +  V   ID+   W  + ++     ED   I ++P+      D+++WHYD+ G YSVKS Y+L ++  +   
Subjt:  GSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLY

Query:  INSKINEASSSRNILGNTYRVKQQSQRTALGTPAHESDANSRRAENLP-----LRRNLEPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGN
         +S     SS  +I       K + + + L     E+   S +   +P       +NL  + H   PP+G  +KVNVDAA        GLG +IR+S G 
Subjt:  INSKINEASSSRNILGNTYRVKQQSQRTALGTPAHESDANSRRAENLP-----LRRNLEPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGN

Query:  IAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRARN
        +  A+    K   +    E  A   G+ +A+  GC  +IVE+D  +  NLV+ +     E+   +  + + +    +V   +  R  NG A  + K A N
Subjt:  IAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRARN

XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.4e-4547.64Show/hide
Query:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY
        +K   +S +++CLPK LGGLNFRD+EGFNQAL+AKQVWR++ NPN LVS++LK+ YF D+ ++ A   R  SY WK  +WGR+LL KG+RSRVGNGS+I 
Subjt:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY

Query:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSVKSSY-KLYMKS
        +F DPWIPR  +F+        ++ KV D I+  G W+++ +  +   ED ++I  +P++  N  D  IWH+D+ G Y+VKS    +Y++S
Subjt:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSVKSSY-KLYMKS

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.0e-4846.73Show/hide
Query:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY
        RK   +   ++C PK  GGLNFRD+EGFNQAL+AK VWR + +PN LVS++LK  YFKDT ++ A    K SY WK  +WGR+LL KG+R RVGNGS+I 
Subjt:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY

Query:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKI
         F DPW+PR +TFK    N    +  V  FI   G W++  + +    ED ++I  +PI + NL+D  +WHYD+ G YSV        +SGYKLY++ K 
Subjt:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKI

Query:  NEASSSRNILGNTY
        N  S+S N  G  +
Subjt:  NEASSSRNILGNTY

XP_023880941.1 uncharacterized protein LOC111993328 [Quercus suber]7.7e-4932.78Show/hide
Query:  DFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIR
        +F   Q   +RK + V+ +K+C PK  GGL FRD+  FN ALLAKQ WRI  N NSL  ++LK+ YF D     A +GR+PSY+W++IM  +E++E G R
Subjt:  DFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIR

Query:  SRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFID-QTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLIWHYDRTGKYSVKSSYKLYMK
          +GNG  + ++KD WIP   +FK     + + ++KV   +D  TG+W+++K+++  +  + E I  + I+   L D LIW   + GK+SVKS+YK+  K
Subjt:  SRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFID-QTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLIWHYDRTGKYSVKSSYKLYMK

Query:  --SGYKLYINSKI----------------NEASSSRNILGNTYRVKQQSQ-RTALGTPAHESD-ANSRRAENLPLRRNLEPKLHCWIPPSGNMWKVNVDA
           G    +   I                + A ++ ++  +   VK   + +TA       +D     + ENL   R  +  +  W PP    +KVN D 
Subjt:  --SGYKLYINSKI----------------NEASSSRNILGNTYRVKQQSQ-RTALGTPAHESD-ANSRRAENLPLRRNLEPKLHCWIPPSGNMWKVNVDA

Query:  AWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVI
        A        G+G +IR++ G + GA +  VK+  KA   E  A+ EGV LA  LG +EI +ESD    I+ +     V   +   +E +   L  F    
Subjt:  AWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVI

Query:  FVYTSRKKNGVADGIIKRARN
         V+  R  N  A  + + AR+
Subjt:  FVYTSRKKNGVADGIIKRARN

XP_024950112.1 uncharacterized protein LOC112496847 [Citrus sinensis]1.8e-4529.33Show/hide
Query:  QKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIP
        +K+   K  GGL FR+   FNQAL+AKQ WR++  PNSLVS++L++ YF+++  + A  G   SY+W++IMWGR++++KG+R R+GNG  I +F D W+P
Subjt:  QKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWIP

Query:  RESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLIWHYDRTGKYSVKSSYKLYMKSGY----------------
        R  TF+         +  V D I     W+  KL+   +  D   I ++P+      D ++WHYD+ G YSVKS Y+L ++S +                
Subjt:  RESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV-NLRDRLIWHYDRTGKYSVKSSYKLYMKSGY----------------

Query:  ----KLYINSKINEASSSRNIL---GNTYRVKQQSQRTA------------------------LGTP--AHESDANSR-------------RAENLPLR-
            +L    KI    +S N+L    N ++ K   + T                         L +P  A   +ANS+             R  +L L  
Subjt:  ----KLYINSKINEASSSRNIL---GNTYRVKQQSQRTA------------------------LGTP--AHESDANSR-------------RAENLPLR-

Query:  -----------------RNLEP-------------------------------KLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAF
                         R L P                               K   W+PP  N++KVNVDAA+ S  LS G+GA+IRDS G I  A   
Subjt:  -----------------RNLEP-------------------------------KLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAF

Query:  SVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRA
           +   A + E  A+  G+ LA++     +I+ESDC + + LV        E+   + AI +Q+  F  V+  +  R  N  A  + K A
Subjt:  SVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRA

TrEMBL top hitse value%identityAlignment
A0A5E4FZN9 PREDICTED: retrotransposon4.4e-4227.69Show/hide
Query:  QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGN
        + K KR    V  + +C  K  GGL FRD+E FNQALLAKQ WRI+  P SLV+++ ++ Y      + A VG  PS++W+++ WG+ELL KG+R RVGN
Subjt:  QVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGN

Query:  GSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKL---------
        G SI ++ D W+P  S FK         +  V D    +G WN+  LK++   ++ +   ++P+ ++   D LIWHY+R G YSVKS Y+L         
Subjt:  GSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKL---------

Query:  ------------YMKSGYKLYINSKI-------------------NEASSSRNILGNTYR--------------VKQQSQRTALGTPAHESDANSRR---
                    + K  + L I +KI                   N   +   I  N +R               K+  + +A G    E   NS R   
Subjt:  ------------YMKSGYKLYINSKI-------------------NEASSSRNILGNTYR--------------VKQQSQRTALGTPAHESDANSRR---

Query:  ------------------------------------------------AENLPLRRNL-----------EPKLHCWIPPSGNMWKVNVDAAWTSSPLSTG
                                                        A+      NL           +  LH W PP   ++K+NVD A  S     G
Subjt:  ------------------------------------------------AENLPLRRNL-----------EPKLHCWIPPSGNMWKVNVDAAWTSSPLSTG

Query:  LGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNG
        +G ++R++ G    A    ++  Y A   E+MA  EG+  A  +G    ++E D    IN +    E  G     +E +   L  F  V+  +T R  N 
Subjt:  LGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNG

Query:  VA
        VA
Subjt:  VA

A0A6J1BRN0 uncharacterized protein LOC1110047876.6e-4647.64Show/hide
Query:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY
        +K   +S +++CLPK LGGLNFRD+EGFNQAL+AKQVWR++ NPN LVS++LK+ YF D+ ++ A   R  SY WK  +WGR+LL KG+RSRVGNGS+I 
Subjt:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY

Query:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSVKSSY-KLYMKS
        +F DPWIPR  +F+        ++ KV D I+  G W+++ +  +   ED ++I  +P++  N  D  IWH+D+ G Y+VKS    +Y++S
Subjt:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPIN-VNLRDRLIWHYDRTGKYSVKSSY-KLYMKS

A0A6J1DX30 uncharacterized protein LOC1110248744.9e-4946.73Show/hide
Query:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY
        RK   +   ++C PK  GGLNFRD+EGFNQAL+AK VWR + +PN LVS++LK  YFKDT ++ A    K SY WK  +WGR+LL KG+R RVGNGS+I 
Subjt:  RKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIY

Query:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKI
         F DPW+PR +TFK    N    +  V  FI   G W++  + +    ED ++I  +PI + NL+D  +WHYD+ G YSV        +SGYKLY++ K 
Subjt:  MFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPI-NVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKI

Query:  NEASSSRNILGNTY
        N  S+S N  G  +
Subjt:  NEASSSRNILGNTY

A0A6J5TGK7 CCHC-type domain-containing protein2.3e-4329.25Show/hide
Query:  LLDFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKG
        +  F   +VK KR    V  + +C  K  GGL FRD+E FNQALL KQ   I+  P SLV+++ ++ Y      + A VG  PS++W+++ WG+ELL KG
Subjt:  LLDFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKG

Query:  IRSRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVP-INVNLRDRLIWHYDRTGKYSVKSSYKL--
        +R RVGNG SI ++ + W+P  S FK         +  V D    +G WN+  LK++   ++ E I ++P +++   D LIWHY+R G YSVKS Y+L  
Subjt:  IRSRVGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVP-INVNLRDRLIWHYDRTGKYSVKSSYKL--

Query:  -------------------YMKSGYKLYINSKIN-----------------EASSSRNILGNTYRVKQQSQRTALGTPAHES------------DANSRR
                           + K  + L I +KI                  E S   +     Y V+  S     G  A+              +A S  
Subjt:  -------------------YMKSGYKLYINSKIN-----------------EASSSRNILGNTYRVKQQSQRTALGTPAHES------------DANSRR

Query:  AENLPLRRNL----------------------EPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEG
        A  L  R +                       +  LH W PP+  ++K+NVD A  S     G+G ++R+  G+   A    ++  Y A   E+MA  EG
Subjt:  AENLPLRRNL----------------------EPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEG

Query:  VSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVA
        +  A  +G  + ++E D    I+ +    E  G     +E +   L  F  V   +T R  N VA
Subjt:  VSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVA

A0A803QCV6 Uncharacterized protein1.3e-4128.33Show/hide
Query:  KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSI
        KRK      +K+C PK  G + F+D+E FNQALLAKQ W+I++NP S+++++LK+ Y+ ++  + A +G   S++W++I+WGR+++EKG+R R+ +G  I
Subjt:  KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSI

Query:  YMFKDPWIPRESTFKTTCTNMEVFNEKVVDFI-DQTGAWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINS
         + +D WIPR STF T  +   V     +D++ +  G+W    ++    ++D  +I  + P + +  D LIWH+   G Y+V S  K   K   K    +
Subjt:  YMFKDPWIPRESTFKTTCTNMEVFNEKVVDFI-DQTGAWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINS

Query:  KINEASSSRNILGNTYRVKQQ-SQRTALGTPAHESDANSRRAE-------------------------NLPLRRN----LEPKLHCWIPPSGNMWKVNVD
          +E   ++N     ++++      T+ G  A       R  +                         N+PL+ +     E  L  W  P  N + +N D
Subjt:  KINEASSSRNILGNTYRVKQQ-SQRTALGTPAHESDANSRRAE-------------------------NLPLRRN----LEPKLHCWIPPSGNMWKVNVD

Query:  AAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNV
        A+  S+  S GLGA+IR++ G++        +  Y   + EV+A+  G+ LA        I+++DC +  N +    +V  +    LE I D  +F + +
Subjt:  AAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAIFEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNV

Query:  IFVYTSRKKNGVADGIIKRA
           +  R++N  A  + K A
Subjt:  IFVYTSRKKNGVADGIIKRA

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657506.0e-1226.42Show/hide
Query:  KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSY--VWKNIMWG-RELLEKGIRSRVGNG
        K+K   V   KVC PK  GGL  R  +  N+AL++K  WR++   NSL + +L+  Y       + ++  K S+   W++I  G R+++  G+    G+G
Subjt:  KRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSY--VWKNIMWG-RELLEKGIRSRVGNG

Query:  SSIYMFKDPWIPRESTFKTTCTNMEVFNEKVV--DFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV--NLRDRLIWHYDRTGKYSVKSSYKL
          I  + D W+  +   +          + VV  D       W+  K+           ++ V +++    RDRL W + + G++SV+S+Y++
Subjt:  SSIYMFKDPWIPRESTFKTTCTNMEVFNEKVV--DFIDQTGAWNINKLKNLVMAEDNEIIKRVPINV--NLRDRLIWHYDRTGKYSVKSSYKL

P93295 Uncharacterized mitochondrial protein AtMg003103.4e-2342.64Show/hide
Query:  RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGR
        +L   + +F     + KRK   V+ QK+C  K   GGL FRD+  FNQALLAKQ +RI+  P++L+S+LL+S YF  + +M   VG +PSY W++I+ GR
Subjt:  RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGR

Query:  ELLEKGIRSRVGNGSSIYMFKDPWIPRES
        ELL +G+   +G+G    ++ D WI  E+
Subjt:  ELLEKGIRSRVGNGSSIYMFKDPWIPRES

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein3.3e-1330.99Show/hide
Query:  LKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI----PRESTFKTTCTNMEVFNEKVVDFIDQTGA---WNINKLKN
        +K+ YFKD  I++A V ++ SY W +++ G  LL+KG R  +G+G +I +  D  +    PR    + T   M + N       ++ G+   W+ +K+  
Subjt:  LKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI----PRESTFKTTCTNMEVFNEKVVDFIDQTGA---WNINKLKN

Query:  LVMAEDNEIIKRVPINVNLR-DRLIWHYDRTGKYSVKSSYKL
         V   D+  I R+ +  + + D++IW+Y+ TG+Y+V+S Y L
Subjt:  LVMAEDNEIIKRVPINVNLR-DRLIWHYDRTGKYSVKSSYKL

AT4G29090.1 Ribonuclease H-like superfamily protein5.2e-2735.2Show/hide
Query:  KSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI---PRES
        K+ GG+ F+D+E FN ALL KQ+WR++S P SL++++ KS YF  +D +NA +G +PS+VWK+I   +E+L +G R+ VGNG  I +++  W+   P  +
Subjt:  KSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSRVGNGSSIYMFKDPWI---PRES

Query:  TFKTTCTNMEVFNE-----KVVDFIDQTG-AWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKYSVKSSY
          +      + +       KV D ID++G  W  + ++ L    + ++I  + P    + D   W Y  +G Y+VKS Y
Subjt:  TFKTTCTNMEVFNE-----KVVDFIDQTG-AWNINKLKNLVMAEDNEIIKRV-PINVNLRDRLIWHYDRTGKYSVKSSY

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.4e-2442.64Show/hide
Query:  RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGR
        +L   + +F     + KRK   V+ QK+C  K   GGL FRD+  FNQALLAKQ +RI+  P++L+S+LL+S YF  + +M   VG +PSY W++I+ GR
Subjt:  RLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPK-SLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGR

Query:  ELLEKGIRSRVGNGSSIYMFKDPWIPRES
        ELL +G+   +G+G    ++ D WI  E+
Subjt:  ELLEKGIRSRVGNGSSIYMFKDPWIPRES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGATTATTAGAACCTTTGTTAGATTTTTGTGGGGATCAAGTGAAAATAAAAAGAAAATGCATTGGTGTAAGTGGGCAAAAGGTCTGCCTTCCAAAAAGTTTAGGGGG
ATTAAACTTTAGAGATGTGGAGGGATTCAATCAAGCTCTCCTAGCCAAACAAGTATGGAGGATTGTATCTAATCCAAACTCTCTAGTATCTCAATTGCTTAAAAGCATTT
ACTTTAAAGACACGGATATAATGAATGCTTTTGTTGGGAGAAAACCATCTTATGTATGGAAAAACATTATGTGGGGTCGGGAGTTGTTAGAGAAGGGAATAAGGAGTAGA
GTGGGGAATGGCTCTTCCATATATATGTTTAAAGATCCTTGGATCCCAAGAGAATCTACTTTTAAAACTACATGCACTAATATGGAGGTTTTCAATGAAAAGGTAGTTGA
TTTTATTGATCAGACAGGAGCATGGAATATTAATAAACTTAAAAACCTTGTTATGGCTGAAGATAATGAGATTATAAAGAGAGTGCCCATCAATGTGAATCTAAGGGATA
GACTAATCTGGCATTATGATCGGACAGGAAAATATTCAGTGAAAAGCAGTTATAAATTGTACATGAAAAGCGGTTATAAATTGTACATCAACTCTAAGATAAATGAGGCT
TCTTCTAGTAGAAATATCCTAGGAAATACCTATCGTGTCAAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCCTGCCCACGAATCGGATGCAAACTCAAGAAGAGCTGA
AAATTTACCTCTGAGAAGAAATCTCGAGCCGAAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCTGT
CAACAGGGTTGGGGGCAATTATCAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGAAGAAGTGATGGCAATC
TTCGAAGGAGTATCGCTTGCTAAGTCTTTGGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGAAATTAATTTGGTGGCAAAGAAAATTGAAGTCTGGGGTGA
GGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAATTAAGA
GGGCTAGGAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGATTATTAGAACCTTTGTTAGATTTTTGTGGGGATCAAGTGAAAATAAAAAGAAAATGCATTGGTGTAAGTGGGCAAAAGGTCTGCCTTCCAAAAAGTTTAGGGGG
ATTAAACTTTAGAGATGTGGAGGGATTCAATCAAGCTCTCCTAGCCAAACAAGTATGGAGGATTGTATCTAATCCAAACTCTCTAGTATCTCAATTGCTTAAAAGCATTT
ACTTTAAAGACACGGATATAATGAATGCTTTTGTTGGGAGAAAACCATCTTATGTATGGAAAAACATTATGTGGGGTCGGGAGTTGTTAGAGAAGGGAATAAGGAGTAGA
GTGGGGAATGGCTCTTCCATATATATGTTTAAAGATCCTTGGATCCCAAGAGAATCTACTTTTAAAACTACATGCACTAATATGGAGGTTTTCAATGAAAAGGTAGTTGA
TTTTATTGATCAGACAGGAGCATGGAATATTAATAAACTTAAAAACCTTGTTATGGCTGAAGATAATGAGATTATAAAGAGAGTGCCCATCAATGTGAATCTAAGGGATA
GACTAATCTGGCATTATGATCGGACAGGAAAATATTCAGTGAAAAGCAGTTATAAATTGTACATGAAAAGCGGTTATAAATTGTACATCAACTCTAAGATAAATGAGGCT
TCTTCTAGTAGAAATATCCTAGGAAATACCTATCGTGTCAAGCAACAAAGTCAGAGAACTGCTCTTGGGACCCCTGCCCACGAATCGGATGCAAACTCAAGAAGAGCTGA
AAATTTACCTCTGAGAAGAAATCTCGAGCCGAAATTGCATTGTTGGATTCCCCCTTCTGGAAACATGTGGAAGGTTAACGTTGATGCAGCTTGGACTTCGTCTCCTCTGT
CAACAGGGTTGGGGGCAATTATCAGAGATTCCATGGGCAACATAGCTGGAGCTTCGGCTTTCTCAGTAAAAATCGACTACAAAGCCCCCATAGAAGAAGTGATGGCAATC
TTCGAAGGAGTATCGCTTGCTAAGTCTTTGGGATGTAAGGAGATTATCGTGGAATCTGATTGCTCTCAGGAAATTAATTTGGTGGCAAAGAAAATTGAAGTCTGGGGTGA
GGTGGAACCTTGGTTGGAGGCCATCTGGGATCAACTTACTTTTTTCTCAAATGTCATTTTTGTATATACTTCCAGAAAGAAAAATGGGGTGGCTGATGGTATAATTAAGA
GGGCTAGGAATGCTTAA
Protein sequenceShow/hide protein sequence
MRLLEPLLDFCGDQVKIKRKCIGVSGQKVCLPKSLGGLNFRDVEGFNQALLAKQVWRIVSNPNSLVSQLLKSIYFKDTDIMNAFVGRKPSYVWKNIMWGRELLEKGIRSR
VGNGSSIYMFKDPWIPRESTFKTTCTNMEVFNEKVVDFIDQTGAWNINKLKNLVMAEDNEIIKRVPINVNLRDRLIWHYDRTGKYSVKSSYKLYMKSGYKLYINSKINEA
SSSRNILGNTYRVKQQSQRTALGTPAHESDANSRRAENLPLRRNLEPKLHCWIPPSGNMWKVNVDAAWTSSPLSTGLGAIIRDSMGNIAGASAFSVKIDYKAPIEEVMAI
FEGVSLAKSLGCKEIIVESDCSQEINLVAKKIEVWGEVEPWLEAIWDQLTFFSNVIFVYTSRKKNGVADGIIKRARNA