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Lcy06g014930 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014930
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionF-box protein
Genome locationChr06:31449568..31451641
RNA-Seq ExpressionLcy06g014930
SyntenyLcy06g014930
Gene Ontology termsNA
InterPro domainsIPR044809 - F-box protein AUF1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064831.1 F-box protein [Cucumis melo var. makuwa]3.0e-1253.61Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVERV  VKWR EF    KS VI  F +IR  +GA+     D++ +FIG LK KVF  IST+IT   + H+L  VVEEHL ME LV R +GG G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

KAG6585288.1 F-box protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1150.51Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVER+  VKWR EF    +S VI  F  IR    +  A+A GFD    FI ELK KVF  IST+IT   + H+LA V+EEHL +E LV R + G G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

XP_008445343.1 PREDICTED: F-box protein At1g22220 [Cucumis melo]3.0e-1253.61Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVERV  VKWR EF    KS VI  F +IR  +GA+     D++ +FIG LK KVF  IST+IT   + H+L  VVEEHL ME LV R +GG G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

XP_023002829.1 F-box protein At1g78100-like [Cucurbita maxima]1.1e-1150.51Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVER+  VKWR EF    +S VI  F  IR    +  A+A GFD    FI ELK KVF  IST+IT   + H+LA ++EEHL ME LV R + G G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

XP_038886087.1 F-box protein At1g22220 [Benincasa hispida]3.0e-1251.49Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQSV
        LKVERV  VKW+ EF    KS VI  F  IR   G + +  D  F+FIG LK KVF  IST+IT   + H+LA VV EHL ME LV R +GG G+V    
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQSV

Query:  N
        N
Subjt:  N

TrEMBL top hitse value%identityAlignment
A0A0A0LN04 F-box domain-containing protein1.2e-1153.61Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVERV  VKWR EF    KS VI  F +IR  +GA+     D   +FIG LK KVF  ISTVIT   + H+L  VVEEHL ME L  R +GG G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

A0A1S3BC00 F-box protein At1g222201.5e-1253.61Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVERV  VKWR EF    KS VI  F +IR  +GA+     D++ +FIG LK KVF  IST+IT   + H+L  VVEEHL ME LV R +GG G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

A0A5A7VGI7 F-box protein1.5e-1253.61Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVERV  VKWR EF    KS VI  F +IR  +GA+     D++ +FIG LK KVF  IST+IT   + H+L  VVEEHL ME LV R +GG G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAM-ASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

A0A6J1GI01 F-box protein At1g22220-like1.6e-1149.49Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVER+  VKWR EF    +S VI  F  IR    +  A+A GFD    FI ELK KVF  IST+IT   + H+LA V+EEHL ++ LV R + G G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

A0A6J1KRK0 F-box protein At1g78100-like5.5e-1250.51Show/hide
Query:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV
        LKVER+  VKWR EF    +S VI  F  IR    +  A+A GFD    FI ELK KVF  IST+IT   + H+LA ++EEHL ME LV R + G G+V
Subjt:  LKVERVRDVKWRVEFEAMTKSGVIFFFLKIR---DNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30200.1 F-box family protein3.2e-0433.33Show/hide
Query:  GELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQS
        G LK +V W IS++I    + ++L  ++ EH  ++RLV     G G++C +
Subjt:  GELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQS

AT1G30200.2 F-box family protein3.2e-0433.33Show/hide
Query:  GELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQS
        G LK +V W IS++I    + ++L  ++ EH  ++RLV     G G++C +
Subjt:  GELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVKGGVGIVCQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGAAGTGTTATGTCCATCCCTCCAAGAGCTTGTTAAGGCACCATTCTTTTTATATTTGAAGGTTGAGAGAGTTAGAGACGTTAAATGGAGAGTGGAGTTCGAGGC
TATGACTAAGAGCGGTGTGATTTTTTTTTTTTTGAAGATTAGGGATAATCGAGGTGCAATGGCGAGTGGCTTTGATTTTCATTTCAATTTCATTGGAGAGCTAAAATTCA
AGGTATTTTGGAAGATTAGCACTGTGATTACGACGTTGACAAAGAAACACATGTTGGCAGGGGTGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTTTTTAGAGTCAAA
GGAGGCGTAGGCATTGTGTGTCAGAGTGTAAACTTTCAAACAAAGTAG
mRNA sequenceShow/hide mRNA sequence
GGAAAATTTTCGAAATAAGCTTACATCCTCCTCCACCCCTCGCTTTCTCCATCTCTTTTATTTTATTCTCTATCTTTTCCCTGATCTTACTGTCATTTTCCTCTCTTTTC
CCTCAAATTTTCCTTTTCCTCAATCTCTCTTCATTTCTGAAGCCCTAATTAGCGAGCGAGAGCTTTTTCAACATGACATCGCAAAGAGTTCATGACAATAGTCGTTTTTC
CACTACATTTGAGACTTCGAGAACCCAAAGTTCTCAACGGATACTCAAGATGACAACCCACTAAACCCATTTCTTCAAATCGTTTTGCTCTTAGCCTAGAGGTTTTGACT
TCAAGCTTCTGTTAACGAAGATGGTTGAAGGTTTCTAGATCTTGAGAAATATGAGGACATCCCATAACACTGTAAGCCAACTTAATGAGAGAAGTGTTATGTCCATCCCT
CCAAGAGCTTGTTAAGGCACCATTCTTTTTATATTTGAAGGTTGAGAGAGTTAGAGACGTTAAATGGAGAGTGGAGTTCGAGGCTATGACTAAGAGCGGTGTGATTTTTT
TTTTTTTGAAGATTAGGGATAATCGAGGTGCAATGGCGAGTGGCTTTGATTTTCATTTCAATTTCATTGGAGAGCTAAAATTCAAGGTATTTTGGAAGATTAGCACTGTG
ATTACGACGTTGACAAAGAAACACATGTTGGCAGGGGTGGTGGAGGAGCATTTGGGGATGGAGAGACTGGTTTTTAGAGTCAAAGGAGGCGTAGGCATTGTGTGTCAGAG
TGTAAACTTTCAAACAAAGTAGCATAACCATTTTTCACAATAAATCCAACTATCAAGGAGCTCAAAAGGCTTACCACATCAACAATAGGCTGCAAAATCTAAGGGGCCAA
CAAACTAGAAGGCTTATCTTCAAAGGTAATTGACATATTTTGTTGAAATCTTGGAATTTTACAACTTTCACATATTTTGTTGGCAAGCATAAATGGATGCATGTGTTTAG
GCAATGAGAATGACCTACTCTGAAATTCTAGCTTAATTATAATTTGGTCTAGGTTTTTTAGTTTTGAGTGTGATCATGTTTTATAATTTTGACTAAGGTTTGTTAGTTTT
GAGATTTTGGTTTAATAGTTTGAGATTCTAGCTTAAAATTATAGGTTGCAAGGGTAGTTTGGATTTGTCAATATGCC
Protein sequenceShow/hide protein sequence
MREVLCPSLQELVKAPFFLYLKVERVRDVKWRVEFEAMTKSGVIFFFLKIRDNRGAMASGFDFHFNFIGELKFKVFWKISTVITTLTKKHMLAGVVEEHLGMERLVFRVK
GGVGIVCQSVNFQTK