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Lcy06g014940 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g014940
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description60S ribosomal protein L38
Genome locationChr06:31509547..31509801
RNA-Seq ExpressionLcy06g014940
SyntenyLcy06g014940
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005829 - cytosol (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002675 - Ribosomal protein L38e
IPR038464 - Ribosomal protein L38e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651744.1 hypothetical protein Csa_006027 [Cucumis sativus]9.7e-2383.33Show/hide
Query:  MVETPFCVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        M+  PF VSLVG+PKQIHEIKDFLLTA RKDAR VKIKRS+DV KFKV CSKYLYTLC+FDSEKA+KLKQSL
Subjt:  MVETPFCVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

KAG6481448.1 hypothetical protein ZIOFF_058050 [Zingiber officinale]9.0e-2184.38Show/hide
Query:  SLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        + + KPKQIHEIKDFLLTA RKDAR VKIKRS+DV KFKV CSKYLYTLC+FDSEKANKLKQSL
Subjt:  SLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

RZB63775.1 60S ribosomal protein L38 [Glycine soja]1.5e-2083.33Show/hide
Query:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        CV L  +PKQIHEIKDFLLTA RKDAR VKIKRSRDV KFKV CSKYLYTLC+FD EKA+KLKQSL
Subjt:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

XP_021645596.1 agamous-like MADS-box protein AGL103 isoform X1 [Hevea brasiliensis]9.0e-2188.33Show/hide
Query:  KPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        +PKQIHEIKDFLLTA RKDAR VKIKRS+DV KFKVCCSKYLYTLC+FDSEKA+KLKQSL
Subjt:  KPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

XP_021645597.1 60S ribosomal protein L38-like isoform X2 [Hevea brasiliensis]1.2e-2089.83Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDAR VKIKRS+DV KFKVCCSKYLYTLC+FDSEKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

TrEMBL top hitse value%identityAlignment
A0A0L9VFB2 Uncharacterized protein9.8e-2183.33Show/hide
Query:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        CV L  +PKQIHEIKDFLLTA RKDAR VKIKRSRDV KFKV CSKYLYTLC+FD EKA+KLKQSL
Subjt:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

A0A0R0H271 Uncharacterized protein9.8e-2183.33Show/hide
Query:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        CV L  +PKQIHEIKDFLLTA RKDAR VKIKRSRDV KFKV CSKYLYTLC+FD EKA+KLKQSL
Subjt:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

A0A0S3S3B3 Uncharacterized protein9.8e-2183.33Show/hide
Query:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        CV L  +PKQIHEIKDFLLTA RKDAR VKIKRSRDV KFKV CSKYLYTLC+FD EKA+KLKQSL
Subjt:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

A0A445GR17 60S ribosomal protein L387.5e-2183.33Show/hide
Query:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        CV L  +PKQIHEIKDFLLTA RKDAR VKIKRSRDV KFKV CSKYLYTLC+FD EKA+KLKQSL
Subjt:  CVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

A0A6A1VKI7 60S ribosomal protein L389.8e-2180.6Show/hide
Query:  FCVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        FC+    +PKQIHEIKDFLLTA RKDAR VKIKRS+DV KFKV CSKYLYTLC+FDSEKA+KLKQSL
Subjt:  FCVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

SwissProt top hitse value%identityAlignment
O22860 60S ribosomal protein L383.2e-2183.05Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDAR VKIKRS+D+ KFKV CS+YLYTLC+FD EKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

P46291 60S ribosomal protein L381.8e-1979.66Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDAR VKIK+++D+ KFKV CSKYLYTLC+ D EKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

P63173 60S ribosomal protein L381.2e-1569.49Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        P++I EIKDFLLTA RKDA+ VKIK+++D  KFKV CS+YLYTL + D EKA KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

Q32PB9 60S ribosomal protein L381.2e-1569.49Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        P++I EIKDFLLTA RKDA+ VKIK+++D  KFKV CS+YLYTL + D EKA KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

Q95V84 60S ribosomal protein L381.7e-1774.58Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDA+ VKIK+++D  KFKV CS+YLYTL + D EKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

Arabidopsis top hitse value%identityAlignment
AT2G43460.1 Ribosomal L38e protein family2.3e-2283.05Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDAR VKIKRS+D+ KFKV CS+YLYTLC+FD EKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL

AT3G59540.1 Ribosomal L38e protein family2.3e-2283.05Show/hide
Query:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL
        PKQIHEIKDFLLTA RKDAR VKIKRS+D+ KFKV CS+YLYTLC+FD EKA+KLKQSL
Subjt:  PKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGAAACTCCCTTTTGTGTATCTCTTGTTGGAAAACCGAAGCAAATCCATGAGATTAAAGATTTTCTTCTCACTGCAGGAAGAAAGGATGCCCGTTATGTC
AAAATTAAGAGGAGCAGAGATGTAGCCAAGTTTAAGGTTTGCTGCTCTAAGTACCTTTACACGCTTTGCTTGTTCGACTCTGAGAAGGCTAACAAATTGAAGCAG
TCTTTGTTTTTTACTATAGTAAACACCCTTCCAAACCACCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGAAACTCCCTTTTGTGTATCTCTTGTTGGAAAACCGAAGCAAATCCATGAGATTAAAGATTTTCTTCTCACTGCAGGAAGAAAGGATGCCCGTTATGTC
AAAATTAAGAGGAGCAGAGATGTAGCCAAGTTTAAGGTTTGCTGCTCTAAGTACCTTTACACGCTTTGCTTGTTCGACTCTGAGAAGGCTAACAAATTGAAGCAG
TCTTTGTTTTTTACTATAGTAAACACCCTTCCAAACCACCTCTAG
Protein sequenceShow/hide protein sequence
MVETPFCVSLVGKPKQIHEIKDFLLTAGRKDARYVKIKRSRDVAKFKVCCSKYLYTLCLFDSEKANKLKQSLFFTIVNTLPNHL