CuGenDBv2

Gene ID	Lcy06g014980
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Genome location	Chr06:31692881..31693755
RNA-Seq Expression	Lcy06g014980
Synteny	Lcy06g014980
Gene Ontology terms	GO:0006310 - DNA recombination (biological process) GO:0032196 - transposition (biological process) GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0035755.1 uncharacterized protein E6C27_scaffold403G00270 [Cucumis melo var. makuwa]

9.9e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELP+I LLE  R L+Q WFY+ RT  SFQRT L    E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]

7.6e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESM STLK+ RELPVI LLE  R L+Q WFY+RRT  SFQ T L  + E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]

2.2e-75

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELPVI LLE  R L+Q WFY+RRT  SFQRT L  + E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GR +KKR  S +E +   +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

XP_008442298.1 PREDICTED: uncharacterized protein LOC103486212 [Cucumis melo]

9.9e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELP+I LLE  R L+Q WFY+ RT  SFQRT L    E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

XP_008455803.1 PREDICTED: uncharacterized protein LOC103495899 [Cucumis melo]

4.2e-74

56.15

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELPVI LLE  R L+Q WFY+RR   SFQRT L  + E+++R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
         +M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC ALS RNL    Y+ +FY +SNL+ +Y K  R IG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN +SC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B5C9 uncharacterized protein LOC103486212

4.8e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELP+I LLE  R L+Q WFY+ RT  SFQRT L    E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

A0A5A7SJA0 Uncharacterized protein

2.0e-74

56.15

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELPVI LLE  R L+Q WFY+RR   SFQRT L  + E+++R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
         +M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC ALS RNL    Y+ +FY +SNL+ +Y K  R IG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN +SC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

A0A5A7T2S1 Uncharacterized protein

4.8e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELP+I LLE  R L+Q WFY+ RT  SFQRT L    E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

A0A5D3CDB8 Uncharacterized protein

3.7e-76

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESM STLK+ RELPVI LLE  R L+Q WFY+RRT  SFQ T L  + E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GRPKKKR  S +E + + +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

A0A5D3E198 MuDRA-like transposase

1.1e-75

57.38

Show/hide

Query:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS
        MRQLE ++PS+R ELE VG+ +WARAFF RK Y +I TNISESMNSTLK+ RELPVI LLE  R L+Q WFY+RRT  SFQRT L  + E+M+R SL QS
Subjt:  MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQS

Query:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP
        R+M+IY ++Q++FEVH R +QF VNI  +TC+CR+WDL+LIPC HAC+ALS RNL    Y+ +FY +SNL+ +Y K  RPIG + Q       G+D +LP
Subjt:  RTMDIYNINQYQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLP

Query:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI
        P  KR  GR +KKR  S +E +   +C RCG+ GHN RSC+ PI
Subjt:  PNTKRSLGRPKKKRIPSCIEWRPAKKCGRCGQVGHNRRSCRNPI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAGGCAGCTAGAAGACATAGCACCATCAATTAGGACAGAGTTAGAGGGGGTAGGGAAAGCTAGGTGGGCAAGAGCGTTTTTTGCAAGGAAGATGTATTCATTAATCAA
AACCAACATATCTGAGAGTATGAATTCAACCCTGAAGGATGCACGTGAACTCCCTGTTATCCATCTCCTAGAAGTTGCACGTAAACTTATGCAAACATGGTTTTATGATC
GTCGAACCTTTTCAAGTTTTCAACGCACAGATTTATGTCCTTGGGTAGAAAACATGCTTCGATCCTCACTTGTACAAAGTCGTACAATGGATATATACAACATCAATCAA
TATCAGTTCGAAGTACATGACCGGACAAAGCAATTTGAGGTCAACATCTTTGCTCAGACGTGCACTTGCAGACGGTGGGATTTGAACCTAATACCTTGTCCACATGCATG
TCTTGCATTATCTCAGAGGAATCTAGAATTTCAAGCGTATTCACATGAGTTTTATCGTCTCTCAAATCTAGTCCAGATATACAGCAAAGACATACGTCCGATAGGCAACA
TTGCACAATTCTCTGGCTACCTAGTTGCTGGTGACGATCCCGTACTCCCGCCTAACACTAAGCGATCACTTGGCAGACCCAAAAAAAAGAGGATCCCATCTTGCATCGAA
TGGAGGCCTGCTAAAAAGTGCGGACGGTGCGGACAGGTTGGACACAACCGCAGATCCTGCAGGAACCCTATTTCAGTTTAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MRQLEDIAPSIRTELEGVGKARWARAFFARKMYSLIKTNISESMNSTLKDARELPVIHLLEVARKLMQTWFYDRRTFSSFQRTDLCPWVENMLRSSLVQSRTMDIYNINQ
YQFEVHDRTKQFEVNIFAQTCTCRRWDLNLIPCPHACLALSQRNLEFQAYSHEFYRLSNLVQIYSKDIRPIGNIAQFSGYLVAGDDPVLPPNTKRSLGRPKKKRIPSCIE
WRPAKKCGRCGQVGHNRRSCRNPISV

Lcy06g014980 (gene) of Sponge gourd (P93075) v1 genome