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Lcy06g015280 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g015280
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr06:33213312..33214641
RNA-Seq ExpressionLcy06g015280
SyntenyLcy06g015280
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO52016.1 reverse transcriptase [Corchorus capsularis]1.6e-1731.41Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW
        + G F+VKSAY++A  +    + A S        W+  W+ + +PK     WR+I N LPT  N+  +G+    +C  C K  ESV H+F+ CKFS+  W
Subjt:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW

Query:  RKIIPLMDGLLSLNRGQWTARDHW--RWMEENLGTEDLEKAILVLWSLWNQRNPTI
         ++ P     ++L   QW +   W   ++ +      L+K ++ LW +WN RN  +
Subjt:  RKIIPLMDGLLSLNRGQWTARDHW--RWMEENLGTEDLEKAILVLWSLWNQRNPTI

PNX73375.1 ribonuclease H, partial [Trifolium pratense]2.5e-1833.77Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKF
        K G ++VKS YH  +  +SN     A S+N + + +W+  W +K  PK    +WRI+ N++P   N+  KG+  +P+C  C  H ES++H+F  C+++K 
Subjt:  KKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKF

Query:  AWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN
         W    PL    L+LN  Q T    W  +M  N   + +EK + +++ +WN RN
Subjt:  AWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN

PNX96793.1 ribonuclease H, partial [Trifolium pratense]5.6e-1833.33Show/hide
Query:  EKKKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFS
        + K G ++VKS YH  +  DSN     A S+N   + +W+  W  K  PK    +WRI+ N++P   N+  KG+  +P+C  C  H ES++H+F  C+++
Subjt:  EKKKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFS

Query:  KFAWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN
        K  W    PL    L+LN  Q T    W  ++  N   + +EK + +++ +WN RN
Subjt:  KFAWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN

PNY07715.1 ribonuclease H [Trifolium pratense]3.3e-1831.12Show/hide
Query:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        K G +TVKS Y+  ++   ++S+Q A  SNNH  +P W K WNIK  PK    +WRI+ N++P  +N+  KGI  + +C  C K  E+++H+F  C+++ 
Subjt:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK

Query:  FAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSVSQP
          W    PL   + + N    T  +  ++M  N   E ++    + +S+W  RN  +  N+D P  + + RA+  NI + +  ++   F+ + S+P
Subjt:  FAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSVSQP

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]1.2e-1729.11Show/hide
Query:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK
        G +TV+S YHLA  +     ++ S++ +    W+ FW+++   K KI  WR+I ++LP  +++  + + T+  C  CR+  ESV H+F+GC ++K  WR 
Subjt:  GAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRK

Query:  IIPLMD--GLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQ
        +    D    +S+ +G     D+ +++  +    + E+ I  LW +W++RN  + S +
Subjt:  IIPLMD--GLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQ

TrEMBL top hitse value%identityAlignment
A0A2K3L4A8 Ribonuclease H (Fragment)1.2e-1833.77Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKF
        K G ++VKS YH  +  +SN     A S+N + + +W+  W +K  PK    +WRI+ N++P   N+  KG+  +P+C  C  H ES++H+F  C+++K 
Subjt:  KKGAFTVKSAYHLAVQIDSNQKA--APSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKF

Query:  AWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN
         W    PL    L+LN  Q T    W  +M  N   + +EK + +++ +WN RN
Subjt:  AWRKIIPLMDGLLSLNRGQWTARDHW-RWMEENLGTEDLEKAILVLWSLWNQRN

A0A2K3NXF2 Ribonuclease H1.6e-1831.12Show/hide
Query:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        K G +TVKS Y+  ++   ++S+Q A  SNNH  +P W K WNIK  PK    +WRI+ N++P  +N+  KGI  + +C  C K  E+++H+F  C+++ 
Subjt:  KKGAFTVKSAYHLAVQ---IDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK

Query:  FAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSVSQP
          W    PL   + + N    T  +  ++M  N   E ++    + +S+W  RN  +  N+D P  + + RA+  NI + +  ++   F+ + S+P
Subjt:  FAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQD-PDFKYLTRAVNANIKEEKKRVSANLFSLSVSQP

A0A2N9GQR6 Uncharacterized protein1.6e-1830.05Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW
        K+G F+VKSAY L V   ++Q A+ S++     +W   W ++  PK K+ +W+  QN +PT + +  KGI     C WC    E+ +H+ WGC+F++  W
Subjt:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW

Query:  RKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDPDFKYLTR---AVNANIKEEKKRV
            P+  G+   +   +T  D       +L T  +E A    W+LW  RN T+   + P    + +   A+ ++  E K +V
Subjt:  RKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDPDFKYLTR---AVNANIKEEKKRV

A0A2N9H3I8 Uncharacterized protein6.4e-2032.5Show/hide
Query:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW
        K+G F+VKSAYHL + + ++Q+AA S+  +   +W   W +K  PK K+ VW+   + LPT + +  KGI  +  C WC +  E+ +H+ WGC+F+   W
Subjt:  KKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAW

Query:  RKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDP
        +     +    SL       +D    +   L +  LE A    W+LW  RN T    + P
Subjt:  RKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDP

A0A7N2LVY0 zf-RVT domain-containing protein3.2e-1930.29Show/hide
Query:  IRRTKSYGMEKKKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHI
        +RR      E +K  F+VKSAY +A+++    +A  S       +W+  W++K  PK +  +WR + N+LPT  N+  +G+     C +CR+H E+  H+
Subjt:  IRRTKSYGMEKKKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHI

Query:  FWGCKFSKFAWRKIIPLMDGLLSLNRGQWTARDH---WRWMEENLGTEDLEKAILVLWSLWNQRNPT-IQSNQDP
         W C F++  W     L  G   + +    A+D    ++ M+E L  E+L++     W++WN RN    Q+ Q P
Subjt:  FWGCKFSKFAWRKIIPLMDGLLSLNRGQWTARDH---WRWMEENLGTEDLEKAILVLWSLWNQRNPT-IQSNQDP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein8.0e-0721.34Show/hide
Query:  WRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTE
        ++  W    IPK     W  +++ L T   +   G    P+C +C  H E+ +H+F+ C+F++  W      +     L        D  RW++     +
Subjt:  WRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTE

Query:  DLEKAILV-----LWSLWNQRNPTIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSVSQPL
        ++   + +     ++++W +RN  +  +        +R   A I E K  +  +L  LS +Q L
Subjt:  DLEKAILV-----LWSLWNQRNPTIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFSLSVSQPL

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.2e-0733.9Show/hide
Query:  WNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK
        W++K  PK K+ +W+ + N+LP G+ +  + I   P C  CR   E++ HI + C F++
Subjt:  WNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPICFWCRKHTESVEHIFWGCKFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATCAAAGAAAATTTTACAGCTATTGATGCATCAACAATCCTCAATTCAATCTCAGGGGGCCCAAATCAGAAGGACGAAATCATATGGAATGGAGAAAAAAAAAGG
AGCCTTTACGGTCAAAAGTGCATACCATCTCGCAGTCCAAATTGACTCAAATCAAAAGGCAGCCCCGTCTAACAATCATGCCCATGACCCTATGTGGAGGAAATTCTGGA
ATATAAAGGCTATTCCCAAAGCCAAGATTTGTGTGTGGCGCATCATTCAGAACTCACTCCCTACGGGCTCAAACATTAATCTCAAGGGCATTTACACTAACCCAATTTGT
TTTTGGTGCAGGAAACACACGGAATCAGTGGAGCATATCTTTTGGGGTTGTAAGTTCTCTAAATTCGCTTGGAGAAAAATTATCCCCCTAATGGATGGCTTGCTTTCGTT
AAACAGGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGGAAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGATCTTAGTTCTATGGAGTTTATGGAACCAGA
GAAACCCAACAATCCAGTCGAATCAAGATCCCGATTTCAAATATCTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGC
CTTTCAGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTCATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAA
mRNA sequenceShow/hide mRNA sequence
CTTACATATGTATTATTGCAGTCAATTCTTCATGAAGGGAAGTATTAAGCTGTGTCTTTCTATTACTGTTGAACATTTATTTTCTTTTAGCTCATTTTGTCTTTTGTGTA
ACAGAATATTCGCAGCTTGCTTTGCAAGTTGGGACTGAATTTTGCTGATTTTTTAAGTGCAATTGAATTGGAACCAATCCCTCCCTGACCTGGTGCAGTATTCTTTGGGG
AAGAGATTTGTTTAAAAAAGGATATAGATGGAGGATAGGGAACGGGCAGCAGGTGACCATAGACCAAGATCCTTGGCTCCCCTCCAATGGGGCAATAACTCCTATTCTCA
CAAAAGATATCCTAAAAGGCAGGAAAGTCCAGGACATTATGGACTCCCAAGGAGCATGGAAGGAAGATGTTATCAAAGAAAATTTTACAGCTATTGATGCATCAACAATC
CTCAATTCAATCTCAGGGGGCCCAAATCAGAAGGACGAAATCATATGGAATGGAGAAAAAAAAAGGAGCCTTTACGGTCAAAAGTGCATACCATCTCGCAGTCCAAATTG
ACTCAAATCAAAAGGCAGCCCCGTCTAACAATCATGCCCATGACCCTATGTGGAGGAAATTCTGGAATATAAAGGCTATTCCCAAAGCCAAGATTTGTGTGTGGCGCATC
ATTCAGAACTCACTCCCTACGGGCTCAAACATTAATCTCAAGGGCATTTACACTAACCCAATTTGTTTTTGGTGCAGGAAACACACGGAATCAGTGGAGCATATCTTTTG
GGGTTGTAAGTTCTCTAAATTCGCTTGGAGAAAAATTATCCCCCTAATGGATGGCTTGCTTTCGTTAAACAGGGGTCAGTGGACAGCGCGAGACCATTGGAGGTGGATGG
AAGAAAATCTCGGAACTGAAGATCTGGAGAAAGCGATCTTAGTTCTATGGAGTTTATGGAACCAGAGAAACCCAACAATCCAGTCGAATCAAGATCCCGATTTCAAATAT
CTAACAAGGGCGGTTAATGCAAACATCAAGGAGGAGAAAAAGAGAGTTTCCGCTAACCTGTTCAGCCTTTCAGTGTCTCAACCCCTCAGGATCGGAGAGCCTCTCGAGTC
ATGCATCGTGGGAGCCGCCCCCAGCAGGTGTGTGGAAGCTTAACGTGGATGCTTCTCGGTCGGAAATGTCCCAAACGAGCGGTCTCGGGTGGATTTTGCGTGACTCTACA
GGATCTCCAATCTGTGGAGGATTGAAGAGGATCAACTCAAGCTGGTCCATCAAAATGCTGGAGATGAAGGCTATTCTAGAAGGGCTGAAGAGTTTACAGTCCAAGTCGAT
TTGAAATTCC
Protein sequenceShow/hide protein sequence
MLSKKILQLLMHQQSSIQSQGAQIRRTKSYGMEKKKGAFTVKSAYHLAVQIDSNQKAAPSNNHAHDPMWRKFWNIKAIPKAKICVWRIIQNSLPTGSNINLKGIYTNPIC
FWCRKHTESVEHIFWGCKFSKFAWRKIIPLMDGLLSLNRGQWTARDHWRWMEENLGTEDLEKAILVLWSLWNQRNPTIQSNQDPDFKYLTRAVNANIKEEKKRVSANLFS
LSVSQPLRIGEPLESCIVGAAPSRCVEA