; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g015780 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g015780
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionAminoacyl-tRNA hydrolase
Genome locationChr06:35127577..35130679
RNA-Seq ExpressionLcy06g015780
SyntenyLcy06g015780
Gene Ontology termsGO:0004045 - aminoacyl-tRNA hydrolase activity (molecular function)
InterPro domainsIPR002833 - Peptidyl-tRNA hydrolase, PTH2
IPR023476 - Peptidyl-tRNA hydrolase II domain superfamily
IPR042237 - Putative peptidyl-tRNA hydrolase PTRHD1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951520.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita moschata]1.2e-7787.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

XP_022951521.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita moschata]1.2e-7787.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

XP_023002512.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X1 [Cucurbita maxima]5.2e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

XP_023002513.1 putative peptidyl-tRNA hydrolase PTRHD1 isoform X2 [Cucurbita maxima]5.2e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

XP_023546189.1 putative peptidyl-tRNA hydrolase PTRHD1 [Cucurbita pepo subsp. pepo]3.6e-7985.19Show/hide
Query:  MVSCATLCEDIMTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLID
        MVSCATLCEDIM SVISAS FT SI  ST+L  CSR+RVW SSSLSLRS NRNSN FSSASMSES ESNS  P DDG    E+T DVL+QYVVLRRDLID
Subjt:  MVSCATLCEDIMTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLID

Query:  SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        SWPLGSVVTQGCHASVSA+WLNKDDPHTSEYCSP NIDSMHKVTLEVKGETQI+NLSEKLKA+SI HKLWIEQPENIPTCLATKPYPKS
Subjt:  SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

TrEMBL top hitse value%identityAlignment
A0A6J1GHT5 Aminoacyl-tRNA hydrolase5.6e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

A0A6J1GJ11 Aminoacyl-tRNA hydrolase5.6e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLC  ARVW  SS+ LRS N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

A0A6J1HBR1 Aminoacyl-tRNA hydrolase4.6e-7283.15Show/hide
Query:  MTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG
        M SVISASRFT SI  ST+L  CSR+RVW SSSLSLRS NRNSN FSS SMSES ESNS  P DD     E+T DVL+QYVVLRRDLIDSWPLGSVVTQG
Subjt:  MTSVISASRFTLSIPNSTRL--CSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQG

Query:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        CHASVSA+WLNKDDPHT EYCSP NIDSMHKVTLEVKGETQI+NLSEKL+ANSI HKLWIEQPENIPTCLATKPYPKS
Subjt:  CHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

A0A6J1KJQ6 Aminoacyl-tRNA hydrolase2.5e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

A0A6J1KTS0 Aminoacyl-tRNA hydrolase2.5e-7887.5Show/hide
Query:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH
        M SVISASRFT SI NS RLCS ARVW  SS+ L S N NS  FSSASMSES ESNS+LPLDDGGAKAEE  DVLVQYVVLRRDLIDSWPLGSVVTQGCH
Subjt:  MTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCH

Query:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS
        ASVSAIWLNKDDPHTSEYCSP+NIDSMHKVTLEVKGETQI+NLSEKLKANSIVHKLW+EQPENIPTCLA+KPYPKS
Subjt:  ASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKS

SwissProt top hitse value%identityAlignment
D3Z4S3 Putative peptidyl-tRNA hydrolase PTRHD18.5e-2349.52Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G++V Q CHA+ +A+ L++D PHT+ Y     +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPK
        +PYPK
Subjt:  KPYPK

Q3SZ85 Putative peptidyl-tRNA hydrolase PTRHD19.0e-2552.38Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        +LVQY+VLR+DL     SWP G+VV Q CHA+ +A+ L++D PHT+ Y     ++ M KV LE   ET +  L+E L+  +I HKLW+EQPENIPTC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPK
        +PYPK
Subjt:  KPYPK

Q6GMV3 Putative peptidyl-tRNA hydrolase PTRHD11.4e-2249.52Show/hide
Query:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT
        VLVQY+VLR+DL     SWP G++V Q CHA+ +A+  ++D PHT+ Y   + +  M KV LE   ET +  L+E L+  +I H LW+EQPENI TC+A 
Subjt:  VLVQYVVLRRDLID---SWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLAT

Query:  KPYPK
        +PYPK
Subjt:  KPYPK

Arabidopsis top hitse value%identityAlignment
AT5G10700.1 Peptidyl-tRNA hydrolase II (PTH2) family protein1.2e-4870.9Show/hide
Query:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINL
        F++AS S S ++  I  + D  + AE+  DV+VQYVVLRRDLIDSWPLGSVVTQGCHASV+AIW  KDDP T +YC P++IDSMHKVTLEVKGETQ++NL
Subjt:  FSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSVVTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINL

Query:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSR
        SEKLK   I HKLW+EQPENIPTC+ATKPYPKS+
Subjt:  SEKLKANSIVHKLWIEQPENIPTCLATKPYPKSR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTTCAAGGGCT
AGGGTTTGGTCATCTTCTTCACTCAGTCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCAATGAGTGAATCCACTGAAAGTAATTCCATTCTT
CCATTGGACGACGGCGGAGCGAAGGCGGAGGAAACCGTCGATGTTTTGGTTCAATACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTC
GTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAACATCGATTCTATGCACAAG
GTTACTCTCGAGGTGAAGGGAGAAACCCAGATCATTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATT
CCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTCGTGAAGACGATGATCGGAAAGAGGCTGATTTGGTAGCTTGTGGTTTGGAACGTACCAAAAAATTCCTG
GACCGACGGCTTCGCTTGAAATCTCAAAGTTCGGTAATCGGTAGCACGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGA
TTCACATTCTCCATTCCCAATTCCACCAGGCTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGATCTACGAATCAAAATTCCAATCCATTT
AGCTCAGCTTCGATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACGACGACGAAGGAGATCGTCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAG
AGATTTGATCGACTCTTGGCCGCTCGGAAGTATCGTAACTCAGAGATGCCATGCTTCAGTTTCTGCCATTTGGTTGAACAAAGACGATCCCCACAATTCAGAGTA
CGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGATTCACACTCTCCATTCCCAATTCCACCAGGCTCTGTTCAAGGGCT
AGGGTTTGGTCATCTTCTTCACTCAGTCTTCGGTCTACGAATCGAAATTCCAATCCATTTAGCTCAGCTTCAATGAGTGAATCCACTGAAAGTAATTCCATTCTT
CCATTGGACGACGGCGGAGCGAAGGCGGAGGAAACCGTCGATGTTTTGGTTCAATACGTGGTGCTCCGGAGAGATTTGATCGATTCGTGGCCGCTCGGAAGTGTC
GTAACTCAGGGATGCCATGCTTCAGTTTCCGCCATTTGGTTGAACAAAGACGATCCCCACACTTCAGAGTACTGTAGTCCCGAAAACATCGATTCTATGCACAAG
GTTACTCTCGAGGTGAAGGGAGAAACCCAGATCATTAACTTATCAGAAAAACTTAAAGCAAATTCAATCGTCCATAAACTCTGGATAGAACAACCAGAGAACATT
CCAACATGTCTTGCCACAAAGCCCTACCCCAAATCTCGTGAAGACGATGATCGGAAAGAGGCTGATTTGGTAGCTTGTGGTTTGGAACGTACCAAAAAATTCCTG
GACCGACGGCTTCGCTTGAAATCTCAAAGTTCGGTAATCGGTAGCACGGTTTCATGTGCTACTTTGTGTGAAGATATCATGACATCTGTAATTTCAGCATCTCGA
TTCACATTCTCCATTCCCAATTCCACCAGGCTCTGTTCGAGGGCTAGGGTTTGGTCATCTTCTTCACTCAGTCTTCGATCTACGAATCAAAATTCCAATCCATTT
AGCTCAGCTTCGATGAGTGAATCCACTGAAAGTAATTCCATTCTTCCATTGGACGACGACGAAGGAGATCGTCGATGTTTTGGTTCAGTACGTGGTGCTCCGGAG
AGATTTGATCGACTCTTGGCCGCTCGGAAGTATCGTAACTCAGAGATGCCATGCTTCAGTTTCTGCCATTTGGTTGAACAAAGACGATCCCCACAATTCAGAGTA
CGGTAG
Protein sequenceShow/hide protein sequence
MVSCATLCEDIMTSVISASRFTLSIPNSTRLCSRARVWSSSSLSLRSTNRNSNPFSSASMSESTESNSILPLDDGGAKAEETVDVLVQYVVLRRDLIDSWPLGSV
VTQGCHASVSAIWLNKDDPHTSEYCSPENIDSMHKVTLEVKGETQIINLSEKLKANSIVHKLWIEQPENIPTCLATKPYPKSREDDDRKEADLVACGLERTKKFL
DRRLRLKSQSSVIGSTVSCATLCEDIMTSVISASRFTFSIPNSTRLCSRARVWSSSSLSLRSTNQNSNPFSSASMSESTESNSILPLDDDEGDRRCFGSVRGAPE
RFDRLLAARKYRNSEMPCFSFCHLVEQRRSPQFRVR