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Lcy06g015880 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g015880
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr06:35269941..35271283
RNA-Seq ExpressionLcy06g015880
SyntenyLcy06g015880
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025558 - Domain of unknown function DUF4283
IPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG48193.1 hypothetical protein EZV62_027487 [Acer yangbiense]6.7e-1928.24Show/hide
Query:  KEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W-----------TAGHG
        ++E   + E+ +D I   D+D++   V K+LT K ++ E F+ LI +IW   G+VE++  G+N ++  F NK+ + K W    W             G G
Subjt:  KEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W-----------TAGHG

Query:  FMTKL-YSSSTTRKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCG
         +TKL ++ +    +I +        +    LA  I   +++  E  E   WG+ +RVKV+++  K L+R  R+K+G   E + + +  E+LPDFC+ CG
Subjt:  FMTKL-YSSSTTRKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCG

Query:  KLRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENK-------NKKERGKEVSENVE
        ++ H + +C ++D++    D  + ++G W+R   I + + K       +  ERG+ V  + E
Subjt:  KLRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENK-------NKKERGKEVSENVE

TXG72599.1 hypothetical protein EZV62_001178 [Acer yangbiense]1.4e-1628.95Show/hide
Query:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W
        +E EKL K +       +E G ++E+ ++ +    +DI+   V K+LT K I+ E F+ LI +IW   G+VE++  G N+++  F N+  + + W    W
Subjt:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W

Query:  TAGHGFMTKLYSS---STTRKEIKESNPW---------SSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESW
          G+  ++   +S   +    E   ++ W             +    LA  I   +++  E  E   WG  LRVKVR++  K L+R  RLK+G+  E   
Subjt:  TAGHGFMTKLYSS---STTRKEIKESNPW---------SSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESW

Query:  IPITIEKLPDFCYQCGKLRHVMNDCEED
        + +  E+LP+FCY CG++ H + +C ++
Subjt:  IPITIEKLPDFCYQCGKLRHVMNDCEED

TXG73339.1 hypothetical protein EZV62_001918 [Acer yangbiense]2.6e-1527.46Show/hide
Query:  EEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----WTAGHGFM-------TKL
        EE G ++E  + +I+   KD++   V K+LT K ++ E F+ LI +IW   G+VE++    NI++  F  ++ + + W    W  G   +       T  
Subjt:  EEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----WTAGHGFM-------TKL

Query:  YSSSTTRK-----EIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGK
        YS     K     +I ++       +    +A  I   +++  +  E   WG+ +RVKV ++  K LRR  RLK+G   E + + +  E+LP+FCY CG+
Subjt:  YSSSTTRK-----EIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGK

Query:  LRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENKNKKE
        + H + +C + D+  +  +    +YG WL+     +L ++N  +
Subjt:  LRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENKNKKE

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]8.7e-1928.68Show/hide
Query:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKF-----KNKKTKKKEW
        M+ E LL +  K KLT EE    ++V+ D + + ++ +  + V K+L  + ISA+   R++   W  E ++ ++  GKN+++  F      N+  K   W
Subjt:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKF-----KNKKTKKKEW

Query:  WTAGHGFMTKLYSSSTTRKEIKESN------------PWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES
        +      + +   SS    E++ +              W + T   + L N+I  F+ ++  E +G  WG +LR++V ++  K LRRG ++ +       
Subjt:  WTAGHGFMTKLYSSSTTRKEIKESN------------PWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES

Query:  WIPITIEKLPDFCYQCGKLRHVMNDCEED--DSEDEDEDERQYGPWLRENFIPRLENKNKKERGK
        WIPI  E+LPDFCY CG + H  +DC+     ++D+     +YGPWLR  F+       K  +GK
Subjt:  WIPITIEKLPDFCYQCGKLRHVMNDCEED--DSEDEDEDERQYGPWLRENFIPRLENKNKKERGK

XP_035547259.1 uncharacterized protein LOC118348856 [Juglans regia]3.1e-1629.49Show/hide
Query:  MKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEWWTAGHGFMTKLYSSSTT
        + L+++EKG  + VE   ++      E   V  +LT +  + E  + ++ K+W    KV  K  G N+++ +F++ + K++  W     F   L      
Subjt:  MKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEWWTAGHGFMTKLYSSSTT

Query:  RKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGKLRHVMNDCEED
         K+++         K G  + N I    +++ E+ E   WGE LR++VR+   + L RG  +K+G      WI    E+LP+FCY CGKL H   DCE +
Subjt:  RKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGKLRHVMNDCEED

Query:  DSED-EDEDERQYGPWL
         ++   D D+  +GPWL
Subjt:  DSED-EDEDERQYGPWL

TrEMBL top hitse value%identityAlignment
A0A5C7GU64 CCHC-type domain-containing protein3.2e-1928.24Show/hide
Query:  KEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W-----------TAGHG
        ++E   + E+ +D I   D+D++   V K+LT K ++ E F+ LI +IW   G+VE++  G+N ++  F NK+ + K W    W             G G
Subjt:  KEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W-----------TAGHG

Query:  FMTKL-YSSSTTRKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCG
         +TKL ++ +    +I +        +    LA  I   +++  E  E   WG+ +RVKV+++  K L+R  R+K+G   E + + +  E+LPDFC+ CG
Subjt:  FMTKL-YSSSTTRKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCG

Query:  KLRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENK-------NKKERGKEVSENVE
        ++ H + +C ++D++    D  + ++G W+R   I + + K       +  ERG+ V  + E
Subjt:  KLRHVMNDCEEDDSEDE--DEDERQYGPWLRENFIPRLENK-------NKKERGKEVSENVE

A0A5C7IU01 CCHC-type domain-containing protein6.8e-1728.95Show/hide
Query:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W
        +E EKL K +       +E G ++E+ ++ +    +DI+   V K+LT K I+ E F+ LI +IW   G+VE++  G N+++  F N+  + + W    W
Subjt:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEW----W

Query:  TAGHGFMTKLYSS---STTRKEIKESNPW---------SSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESW
          G+  ++   +S   +    E   ++ W             +    LA  I   +++  E  E   WG  LRVKVR++  K L+R  RLK+G+  E   
Subjt:  TAGHGFMTKLYSS---STTRKEIKESNPW---------SSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESW

Query:  IPITIEKLPDFCYQCGKLRHVMNDCEED
        + +  E+LP+FCY CG++ H + +C ++
Subjt:  IPITIEKLPDFCYQCGKLRHVMNDCEED

A0A6J1DU55 uncharacterized protein LOC1110231354.2e-1928.68Show/hide
Query:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKF-----KNKKTKKKEW
        M+ E LL +  K KLT EE    ++V+ D + + ++ +  + V K+L  + ISA+   R++   W  E ++ ++  GKN+++  F      N+  K   W
Subjt:  MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKF-----KNKKTKKKEW

Query:  WTAGHGFMTKLYSSSTTRKEIKESN------------PWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES
        +      + +   SS    E++ +              W + T   + L N+I  F+ ++  E +G  WG +LR++V ++  K LRRG ++ +       
Subjt:  WTAGHGFMTKLYSSSTTRKEIKESN------------PWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES

Query:  WIPITIEKLPDFCYQCGKLRHVMNDCEED--DSEDEDEDERQYGPWLRENFIPRLENKNKKERGK
        WIPI  E+LPDFCY CG + H  +DC+     ++D+     +YGPWLR  F+       K  +GK
Subjt:  WIPITIEKLPDFCYQCGKLRHVMNDCEED--DSEDEDEDERQYGPWLRENFIPRLENKNKKERGK

A0A6P9EID8 uncharacterized protein LOC1183488561.5e-1629.49Show/hide
Query:  MKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEWWTAGHGFMTKLYSSSTT
        + L+++EKG  + VE   ++      E   V  +LT +  + E  + ++ K+W    KV  K  G N+++ +F++ + K++  W     F   L      
Subjt:  MKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEWWTAGHGFMTKLYSSSTT

Query:  RKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGKLRHVMNDCEED
         K+++         K G  + N I    +++ E+ E   WGE LR++VR+   + L RG  +K+G      WI    E+LP+FCY CGKL H   DCE +
Subjt:  RKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGKLRHVMNDCEED

Query:  DSED-EDEDERQYGPWL
         ++   D D+  +GPWL
Subjt:  DSED-EDEDERQYGPWL

A0A803KRS5 Uncharacterized protein6.1e-1832.03Show/hide
Query:  EKLLKELGKMKLTKEEKGGL----VEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKK-----E
        E LL +  K+KL +EE   +    VE+ED+    T   I  + V K+LTSK  +AE  +R +  +W    KV +K    N++V +F  +K K+K      
Subjt:  EKLLKELGKMKLTKEEKGGL----VEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKK-----E

Query:  WWTAGHGFMTKLYSSSTTRKEIKESN----------PWSSGTKYGMA-LANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES
        W+  G   + K  +      E+  ++          P+S   +  +  + + + TF++ +  E  G  WGE +RVKV ++  K LRRG  L VG+ A   
Subjt:  WWTAGHGFMTKLYSSSTTRKEIKESN----------PWSSGTKYGMA-LANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEES

Query:  WIPITIEKLPDFCYQCGKLRHVMNDC--EEDDSEDEDEDERQYGPWLRENFIPRLENKN------KKERGKEVSENVEKKK
        W+PI  E+L +FC  CG+L H  + C  +E+  + E E   QYGPWLR +  PR   +N      K++R KE   +++KK+
Subjt:  WIPITIEKLPDFCYQCGKLRHVMNDC--EEDDSEDEDEDERQYGPWLRENFIPRLENKN------KKERGKEVSENVEKKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGAAACTCCTCAAAGAGCTAGGAAAAATGAAGTTGACCAAAGAGGAGAAAGGGGGCCTCGTGGAGGTTGAAGATGATGATATAGACATCACAGATAAGGA
TATTGAAAACACAACAGTTTGTAAGATTCTGACCTCCAAGAGCATCAGCGCGGAACACTTCCAAAGATTAATACCGAAAATATGGGGTACAGAAGGAAAAGTGGAAATGA
AGAAAGCCGGCAAAAATATTTACGTCTGCAAATTCAAAAACAAAAAAACAAAAAAAAAAGAGTGGTGGACGGCGGGCCATGGGTTTATGACAAAGCTATACTCCTCTTCA
ACGACCCGAAAGGAAATAAAGGAATCCAATCCCTGGAGTTCAGGTACGAAATATGGAATGGCGCTAGCAAACTCCATCGACACATTTATTAAAATGGAGAAAGAAGAAGG
AGAAGGCAGAGTATGGGGTGAAACGTTGAGAGTTAAAGTTAGGCTGGAAGCAGGTAAAGCCCTACGAAGAGGAACGAGACTGAAAGTGGGTTCAATGGCTGAGGAATCAT
GGATCCCAATAACGATTGAAAAACTTCCGGATTTCTGTTATCAATGTGGTAAACTACGACACGTGATGAACGATTGCGAAGAGGACGACAGTGAGGATGAGGATGAAGAC
GAAAGACAATACGGGCCTTGGTTAAGAGAGAATTTCATTCCTAGGCTTGAAAATAAAAACAAAAAAGAGAGAGGGAAAGAAGTTTCAGAAAATGTAGAAAAGAAGAAAGA
GGAGCTGGGAAAAACGGTAGAGATTATGGCCAAGAAAGTTCAGGAGGCTGTCGGAATCATGTCCGGAGAAGATTACCGACCGAAAAATCGACAGTACTCGGCCAACGAGG
TAGAATCAGCGGAAGGAAAAGACAAAAAACAATCATTACAAGAACAAACAAGGCATGTGAAAGCTGACAATCTAGCCGTTGGACAGCAACATTCGGTGATTCCAAAGTCA
CAAGAACCAAGAAAGGACCAGATAGTTCAAGAAAGAAAGGAAGCTGCAAGTACATCACATGGTCAGATACAAAGTTTAAGTAATAAGGAAATCAAGTGGGACCCAGCTAG
TAATATTAAGGAAAAAATGATAGCAGGAGGAAAAGAAGGTCCGGTCTCGACCGATGGCCCAATGGACAAAACAGAAGCAAAAGAAGTTAAACCAGCTGGGGATGAACAAT
GCAACCTGGACATCACTGTCAAAGAACAGAAAACCCAAAACCAAACCAGCAACCATGGAAATAAAAGAGCTACAAAAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAGAAACTCCTCAAAGAGCTAGGAAAAATGAAGTTGACCAAAGAGGAGAAAGGGGGCCTCGTGGAGGTTGAAGATGATGATATAGACATCACAGATAAGGA
TATTGAAAACACAACAGTTTGTAAGATTCTGACCTCCAAGAGCATCAGCGCGGAACACTTCCAAAGATTAATACCGAAAATATGGGGTACAGAAGGAAAAGTGGAAATGA
AGAAAGCCGGCAAAAATATTTACGTCTGCAAATTCAAAAACAAAAAAACAAAAAAAAAAGAGTGGTGGACGGCGGGCCATGGGTTTATGACAAAGCTATACTCCTCTTCA
ACGACCCGAAAGGAAATAAAGGAATCCAATCCCTGGAGTTCAGGTACGAAATATGGAATGGCGCTAGCAAACTCCATCGACACATTTATTAAAATGGAGAAAGAAGAAGG
AGAAGGCAGAGTATGGGGTGAAACGTTGAGAGTTAAAGTTAGGCTGGAAGCAGGTAAAGCCCTACGAAGAGGAACGAGACTGAAAGTGGGTTCAATGGCTGAGGAATCAT
GGATCCCAATAACGATTGAAAAACTTCCGGATTTCTGTTATCAATGTGGTAAACTACGACACGTGATGAACGATTGCGAAGAGGACGACAGTGAGGATGAGGATGAAGAC
GAAAGACAATACGGGCCTTGGTTAAGAGAGAATTTCATTCCTAGGCTTGAAAATAAAAACAAAAAAGAGAGAGGGAAAGAAGTTTCAGAAAATGTAGAAAAGAAGAAAGA
GGAGCTGGGAAAAACGGTAGAGATTATGGCCAAGAAAGTTCAGGAGGCTGTCGGAATCATGTCCGGAGAAGATTACCGACCGAAAAATCGACAGTACTCGGCCAACGAGG
TAGAATCAGCGGAAGGAAAAGACAAAAAACAATCATTACAAGAACAAACAAGGCATGTGAAAGCTGACAATCTAGCCGTTGGACAGCAACATTCGGTGATTCCAAAGTCA
CAAGAACCAAGAAAGGACCAGATAGTTCAAGAAAGAAAGGAAGCTGCAAGTACATCACATGGTCAGATACAAAGTTTAAGTAATAAGGAAATCAAGTGGGACCCAGCTAG
TAATATTAAGGAAAAAATGATAGCAGGAGGAAAAGAAGGTCCGGTCTCGACCGATGGCCCAATGGACAAAACAGAAGCAAAAGAAGTTAAACCAGCTGGGGATGAACAAT
GCAACCTGGACATCACTGTCAAAGAACAGAAAACCCAAAACCAAACCAGCAACCATGGAAATAAAAGAGCTACAAAAAAATGA
Protein sequenceShow/hide protein sequence
MEEEKLLKELGKMKLTKEEKGGLVEVEDDDIDITDKDIENTTVCKILTSKSISAEHFQRLIPKIWGTEGKVEMKKAGKNIYVCKFKNKKTKKKEWWTAGHGFMTKLYSSS
TTRKEIKESNPWSSGTKYGMALANSIDTFIKMEKEEGEGRVWGETLRVKVRLEAGKALRRGTRLKVGSMAEESWIPITIEKLPDFCYQCGKLRHVMNDCEEDDSEDEDED
ERQYGPWLRENFIPRLENKNKKERGKEVSENVEKKKEELGKTVEIMAKKVQEAVGIMSGEDYRPKNRQYSANEVESAEGKDKKQSLQEQTRHVKADNLAVGQQHSVIPKS
QEPRKDQIVQERKEAASTSHGQIQSLSNKEIKWDPASNIKEKMIAGGKEGPVSTDGPMDKTEAKEVKPAGDEQCNLDITVKEQKTQNQTSNHGNKRATKK