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Lcy06g015910 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g015910
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:35367291..35368738
RNA-Seq ExpressionLcy06g015910
SyntenyLcy06g015910
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PNX95399.1 ribonuclease H, partial [Trifolium pratense]2.6e-0935.04Show/hide
Query:  VSDRAKGRMIVSSDKTRPYSFV-------TSLVD----GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMK
        VS    GR +   D   PY F+       + LV+    G   +   L   L   DD  +F +A   E+  L R+L  YEQASGQ INL KS    S+N+ 
Subjt:  VSDRAKGRMIVSSDKTRPYSFV-------TSLVD----GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMK

Query:  PEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
          D+      LG++ +   G Y G+PS +GR+KK +F
Subjt:  PEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

XP_019175775.1 PREDICTED: uncharacterized protein LOC109171099 [Ipomoea nil]9.1e-1040.4Show/hide
Query:  GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        G  PIS      L   DD+++F KA  +E + +K+ L +YE+ SGQ +N  KS+   SKNM+ ED       LG+ +  + G Y G+PS +GRNKK +F
Subjt:  GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

XP_019195637.1 PREDICTED: uncharacterized protein LOC109189300 [Ipomoea nil]2.0e-0940.4Show/hide
Query:  GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        G  PIS      L   DD+++F KA+ +E E +K+ L  YE+ SGQ +N  KS+   SKN K +D+      LG+ +  + G Y G+PS +GRNKK +F
Subjt:  GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

XP_021838584.1 uncharacterized protein LOC110778326 [Spinacia oleracea]1.2e-0944.83Show/hide
Query:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        L   DD++IF +A+ ++I+ALKRVL  YE+ASGQ IN+ KS    S NM  E +    ++LG+  +E  G Y GMP+ +GR+K ++F
Subjt:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]5.3e-1048.81Show/hide
Query:  DDNMIFIKAEAKEIEALKRVLEEYEQA-SGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        DD ++F KA      ++K +LE YE+A SGQ INLDKS F+ SKN K +  G   + L +   ESLG Y G+PSQ GRNK++ F
Subjt:  DDNMIFIKAEAKEIEALKRVLEEYEQA-SGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

TrEMBL top hitse value%identityAlignment
A0A2K3MXC9 Ribonuclease H (Fragment)1.3e-0935.04Show/hide
Query:  VSDRAKGRMIVSSDKTRPYSFV-------TSLVD----GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMK
        VS    GR +   D   PY F+       + LV+    G   +   L   L   DD  +F +A   E+  L R+L  YEQASGQ INL KS    S+N+ 
Subjt:  VSDRAKGRMIVSSDKTRPYSFV-------TSLVD----GYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMK

Query:  PEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
          D+      LG++ +   G Y G+PS +GR+KK +F
Subjt:  PEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

A0A2Z6MP00 Reverse transcriptase domain-containing protein8.3e-0936.76Show/hide
Query:  GRMIVSSDKTRPYSFV------TSL----VDGYDPISFQL------VITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKP
        GR +   D   PY F+      TSL    VDG +    ++      V  L   DD  +F +A   E   L  +LE YEQASGQ INL KS    S+N   
Subjt:  GRMIVSSDKTRPYSFV------TSL----VDGYDPISFQL------VITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKP

Query:  EDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
          Q      +G+K +   G Y G+PS VGR+KK++F
Subjt:  EDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

A0A2Z6NEB9 Reverse transcriptase domain-containing protein2.2e-0943.68Show/hide
Query:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        L   DD  +F +A   E+  L R+L  YEQASGQ +NLDKS    S+NM    +    + LG+K +   G Y G+PS VGR+KK  F
Subjt:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

A0A2Z6NEN7 Uncharacterized protein1.7e-0941.38Show/hide
Query:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        L   DD  +F +A A+E+  LK +L+ YE+ASGQ IN+ KS    S+N+  E Q    + +G++ +   G Y G+PS VGR KK++F
Subjt:  LRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

A0A6J1DUG8 uncharacterized protein LOC1110241352.6e-1048.81Show/hide
Query:  DDNMIFIKAEAKEIEALKRVLEEYEQA-SGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF
        DD ++F KA      ++K +LE YE+A SGQ INLDKS F+ SKN K +  G   + L +   ESLG Y G+PSQ GRNK++ F
Subjt:  DDNMIFIKAEAKEIEALKRVLEEYEQA-SGQTINLDKSTFMTSKNMKPEDQGRCEKALGIKRMESLGFYQGMPSQVGRNKKKSF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTCGACAGTTGTAAGCGACCGAGCCAAGGGGCGAATGATTGTTTCGTCTGACAAAACCCGTCCATATTCCTTTGTGACCAGTCTGGTTGACGGATAC
GACCCGATTTCTTTCCAATTGGTCATTACTCTTCGGATTTTAGATGATAACATGATTTTTATCAAAGCTGAAGCCAAGGAAATAGAAGCTCTCAAAAGAGTTCTG
GAGGAGTACGAACAAGCTTCAGGCCAGACCATCAATCTGGACAAATCAACCTTTATGACCAGCAAGAATATGAAGCCTGAAGATCAAGGGAGGTGTGAAAAAGCC
CTGGGTATCAAAAGAATGGAGTCTCTAGGATTTTACCAAGGGATGCCGTCTCAAGTTGGGAGAAACAAAAAAAAAAGCTTTCAGAAGGATCAAAGACAGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTCGTCGACAGTTGTAAGCGACCGAGCCAAGGGGCGAATGATTGTTTCGTCTGACAAAACCCGTCCATATTCCTTTGTGACCAGTCTGGTTGACGGATAC
GACCCGATTTCTTTCCAATTGGTCATTACTCTTCGGATTTTAGATGATAACATGATTTTTATCAAAGCTGAAGCCAAGGAAATAGAAGCTCTCAAAAGAGTTCTG
GAGGAGTACGAACAAGCTTCAGGCCAGACCATCAATCTGGACAAATCAACCTTTATGACCAGCAAGAATATGAAGCCTGAAGATCAAGGGAGGTGTGAAAAAGCC
CTGGGTATCAAAAGAATGGAGTCTCTAGGATTTTACCAAGGGATGCCGTCTCAAGTTGGGAGAAACAAAAAAAAAAGCTTTCAGAAGGATCAAAGACAGAGTTGA
Protein sequenceShow/hide protein sequence
MNSSTVVSDRAKGRMIVSSDKTRPYSFVTSLVDGYDPISFQLVITLRILDDNMIFIKAEAKEIEALKRVLEEYEQASGQTINLDKSTFMTSKNMKPEDQGRCEKA
LGIKRMESLGFYQGMPSQVGRNKKKSFQKDQRQS