; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g016290 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g016290
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionBED-type domain-containing protein
Genome locationChr06:36962228..36963603
RNA-Seq ExpressionLcy06g016290
SyntenyLcy06g016290
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8546963.1 hypothetical protein F0562_003392 [Nyssa sinensis]4.9e-4466.67Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF SK+WQ S Y+KK +    M IILA  NFW+SIKYCLKCV+PLVKVLRLVDGD +PAMGYIY+AMD+A EQIEKNF+ ++KHYKP+WDIID RW MQL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRWIQREGIVWNNK
        H+PL+A  YYLNPR  ++ G +   K
Subjt:  HRPLHATTYYLNPRWIQREGIVWNNK

KAF8369944.1 hypothetical protein HHK36_032026 [Tetracentron sinense]8.6e-4168.7Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MFGS+DWQRS+YAK+ DGA V  I+LAN  FW +IKYC+K  +PLVKVLRLVD D RPAMGYIY+AMD AKE I  N   ++K YKPIWDIID+RW +Q+
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNPR+
Subjt:  HRPLHATTYYLNPRW

KAF8404102.1 hypothetical protein HHK36_008982 [Tetracentron sinense]1.9e-4068.7Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MFGS+DWQRS YAK+ DGA V  I+LANS FW +IKYC+K ++PLVKVLRLVD D RPAMGYIY+AMD AKE I  N   ++K YKPIWDIID+ W +Q+
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNPR+
Subjt:  HRPLHATTYYLNPRW

KAF8410857.1 hypothetical protein HHK36_003394 [Tetracentron sinense]1.7e-4169.57Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MFGS+DWQRS+YAK+ DGA V  I+LANS FW +IKYC+K  +PLVKVLRLVD D RPAMGYIY+AMD AKE I  N   ++K YKPIWDIID+RW +Q+
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNPR+
Subjt:  HRPLHATTYYLNPRW

XP_030969699.1 uncharacterized protein LOC115989976 [Quercus lobata]1.1e-4062.7Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S++W +S YAKKSDG  V  I+L++  FW +IK+CLKCVIPLVKVLRLVDGDA+PAMGYIY+AMDRAKEQ+ KNFN +Q+ Y+PI  II+ RW +QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRWIQREGIVWNNK
        HRPLHA  Y+LNP++      V N +
Subjt:  HRPLHATTYYLNPRWIQREGIVWNNK

TrEMBL top hitse value%identityAlignment
A0A151QZQ8 DUF659 domain-containing protein1.8e-3661.74Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S++W  S +A KS+   VM ++L++  FW SI YCLKCVIPLVKVLRLVDGD++PA  YIY+AMDRAKE+I +NF   +  YK +W IID RW +QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNPR+
Subjt:  HRPLHATTYYLNPRW

A0A151TGM2 Uncharacterized protein1.8e-3661.74Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S++W  S +A KS+   VM ++L++  FW SI YCLKCVIPLVKVLRLVDGD++PA  YIY+AMDRAKE+I +NF   +  YK +W IID RW +QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNPR+
Subjt:  HRPLHATTYYLNPRW

A0A2R6R208 SCAN domain-containing protein (Fragment)6.4e-3455.65Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        +F S  W+ S ++  + G  +  I+  N  FW+ +  CLK  IPL+KVLRLVD D +PAMG++Y+AMDRAKEQI++NFN +QK Y+PIWDIIDKRW  QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        H PLHA  Y+LNP +
Subjt:  HRPLHATTYYLNPRW

A0A3S3NB18 Uncharacterized protein1.9e-3864.6Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF SK+W+ S+Y+K  DG  V  IIL +  FW  IKYC+KCV PLVKVLRLVD D RP MGYIY+AMDRAKE I KNF+ ++K Y PIW I+D RW +QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNP
        HRPLHA  Y+LNP
Subjt:  HRPLHATTYYLNP

A0A5J5BV14 Uncharacterized protein2.4e-4466.67Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF SK+WQ S Y+KK +    M IILA  NFW+SIKYCLKCV+PLVKVLRLVDGD +PAMGYIY+AMD+A EQIEKNF+ ++KHYKP+WDIID RW MQL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRWIQREGIVWNNK
        H+PL+A  YYLNPR  ++ G +   K
Subjt:  HRPLHATTYYLNPRWIQREGIVWNNK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13020.1 hAT transposon superfamily protein2.1e-2143.86Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLV-DGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQ
        MF S  W      KK +G +V  ++  +S+FW +++  LKC  PL   LRL  + D    +GYIYD +D  K  I+K FN  +KHY  +WD+ID  W   
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLV-DGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQ

Query:  LHRPLHATTYYLNP
        LH PLHA  YYLNP
Subjt:  LHRPLHATTYYLNP

AT3G13030.1 hAT transposon superfamily protein8.0e-2138.05Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S +W        ++    +  ++++S+FW +++  LKC  PL+  L L        +GY+YD MD  KE I + FN   + YKP+WD+ID  W   L
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNP
        H PLHA  Y+LNP
Subjt:  HRPLHATTYYLNP

AT3G13030.2 hAT transposon superfamily protein8.0e-2138.05Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S +W        ++    +  ++++S+FW +++  LKC  PL+  L L        +GY+YD MD  KE I + FN   + YKP+WD+ID  W   L
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNP
        H PLHA  Y+LNP
Subjt:  HRPLHATTYYLNP

AT3G13030.3 hAT transposon superfamily protein8.0e-2138.05Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        MF S +W        ++    +  ++++S+FW +++  LKC  PL+  L L        +GY+YD MD  KE I + FN   + YKP+WD+ID  W   L
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNP
        H PLHA  Y+LNP
Subjt:  HRPLHATTYYLNP

AT5G33406.1 hAT dimerisation domain-containing protein / transposase-related5.7e-2746.96Show/hide
Query:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL
        M  S +W  S + K++ G  + K      +FW ++ + LK   PL++VLR+VDG+ +P MGYIY AMD+AKE I K+F   +++YK  ++IID+RW +QL
Subjt:  MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQL

Query:  HRPLHATTYYLNPRW
        HRPLHA  YYLNP +
Subjt:  HRPLHATTYYLNPRW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGGGTCTAAAGATTGGCAAAGAAGTAACTATGCAAAGAAGTCTGATGGGGCTACGGTAATGAAAATTATTCTTGCTAATTCAAACTTTTGGTCATCAATA
AAGTATTGTTTAAAATGTGTTATCCCTTTAGTAAAAGTTTTAAGACTTGTTGATGGTGATGCGAGACCTGCAATGGGATACATATACGATGCAATGGACAGGGCA
AAGGAACAAATTGAGAAGAATTTCAACAGAATTCAGAAACATTATAAGCCTATTTGGGATATTATTGATAAAAGATGGACAATGCAACTTCACAGGCCTCTTCAT
GCAACAACATATTATCTTAATCCAAGGTGGATTCAAAGAGAAGGAATCGTTTGGAACAACAAAGGACCTAGAGATCTATCCACCAATTATAAAAGTGACAAAGGG
AAGGAAGTTATTGAATTAGTAGATGAAGAAAGCAATGGGGAAGAAGCATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGGGTCTAAAGATTGGCAAAGAAGTAACTATGCAAAGAAGTCTGATGGGGCTACGGTAATGAAAATTATTCTTGCTAATTCAAACTTTTGGTCATCAATA
AAGTATTGTTTAAAATGTGTTATCCCTTTAGTAAAAGTTTTAAGACTTGTTGATGGTGATGCGAGACCTGCAATGGGATACATATACGATGCAATGGACAGGGCA
AAGGAACAAATTGAGAAGAATTTCAACAGAATTCAGAAACATTATAAGCCTATTTGGGATATTATTGATAAAAGATGGACAATGCAACTTCACAGGCCTCTTCAT
GCAACAACATATTATCTTAATCCAAGGTGGATTCAAAGAGAAGGAATCGTTTGGAACAACAAAGGACCTAGAGATCTATCCACCAATTATAAAAGTGACAAAGGG
AAGGAAGTTATTGAATTAGTAGATGAAGAAAGCAATGGGGAAGAAGCATAG
Protein sequenceShow/hide protein sequence
MFGSKDWQRSNYAKKSDGATVMKIILANSNFWSSIKYCLKCVIPLVKVLRLVDGDARPAMGYIYDAMDRAKEQIEKNFNRIQKHYKPIWDIIDKRWTMQLHRPLH
ATTYYLNPRWIQREGIVWNNKGPRDLSTNYKSDKGKEVIELVDEESNGEEA