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Lcy06g016410 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g016410
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr06:37660183..37661976
RNA-Seq ExpressionLcy06g016410
SyntenyLcy06g016410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB4262994.1 unnamed protein product [Prunus armeniaca]2.3e-3852.74Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED
        +Q P   ++R+ + RY PS  FL+AGVG++PS IWRSL WG++LL KG+ WRVGNGE + VY + W+P  S  K+ S   L L T V DL T SGQWN  
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED

Query:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
        LL+  F  +EV  IL IPL  ++S D +IWH+E+ G+YSVKSGY+L
Subjt:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

ONI01138.1 hypothetical protein PRUPE_6G123900 [Prunus persica]6.6e-3853.15Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR
        P   ++R+ + RY PS  FL+A VG++PS IWRSL WG++LL KG+ WRVG+G  + VY   W+P  SC K+ SP  L L TRV DL T SGQWN  LL+
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR

Query:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
          F  +EV  IL IPL  ++  D +IWH+E+ G+YSVKSGYRL
Subjt:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]1.9e-3751.37Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR
        P   ++R+ + RY PS  FL+A VG++PS IW SL WG++LL KG+ WRVG+G  + VY   W+P  SC K+ SP  L L TRV DL T SGQWN  LL+
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR

Query:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQV
          F  +EV  IL IPL  ++  D +IWH+E+ G+YSVKSGYRL ++
Subjt:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQV

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]4.3e-3744.09Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLT-ISGQWNE
        + +P   LSRVLKGRY     F++A +  +PS IWRS++WGR LL KG+ WR+GNG+ V +YG NW+P+   LK+ S   L L +RV+ L+    G W  
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLT-ISGQWNE

Query:  DLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALL----AQTPSSSSVRHCPVGGRGVGKWGSQTKLR
        D++R  F+P E + IL+IP+   + ED++IW++EK GVYSV+SGY+   VALL     Q PSSSS         G  K     K++
Subjt:  DLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALL----AQTPSSSSVRHCPVGGRGVGKWGSQTKLR

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]3.9e-3845.62Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED
        +Q+P+  ++RVLK RY     F++AG+GS PS +WRS++WGR++L KG  WR+GNG+ V VYG+NWIP  +  K  S  ++  DT VA+L+    QW ED
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED

Query:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALLAQTPSSSS
        L+  HF P +   I+ IPL     ED++IWH++K G YSVKSGY++       + PS S+
Subjt:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALLAQTPSSSS

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein3.2e-3853.15Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR
        P   ++R+ + RY PS  FL+A VG++PS IWRSL WG++LL KG+ WRVG+G  + VY   W+P  SC K+ SP  L L TRV DL T SGQWN  LL+
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR

Query:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
          F  +EV  IL IPL  ++  D +IWH+E+ G+YSVKSGYRL
Subjt:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

A0A6J1DAR4 uncharacterized protein LOC1110189542.1e-3744.09Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLT-ISGQWNE
        + +P   LSRVLKGRY     F++A +  +PS IWRS++WGR LL KG+ WR+GNG+ V +YG NW+P+   LK+ S   L L +RV+ L+    G W  
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLT-ISGQWNE

Query:  DLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALL----AQTPSSSSVRHCPVGGRGVGKWGSQTKLR
        D++R  F+P E + IL+IP+   + ED++IW++EK GVYSV+SGY+   VALL     Q PSSSS         G  K     K++
Subjt:  DLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALL----AQTPSSSSVRHCPVGGRGVGKWGSQTKLR

A0A6J5TGK7 CCHC-type domain-containing protein1.1e-3852.74Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED
        +Q P   ++R+ + RY PS  FL+AGVG++PS IWRSL WG++LL KG+ WRVGNGE + VY + W+P  S  K+ S   L L T V DL T SGQWN  
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNED

Query:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
        LL+  F  +EV  IL IPL  ++S D +IWH+E+ G+YSVKSGY+L
Subjt:  LLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)3.2e-3853.15Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR
        P   ++R+ + RY PS  FL+A VG++PS IWRSL WG++LL KG+ WRVG+G  + VY   W+P  SC K+ SP  L L TRV DL T SGQWN  LL+
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR

Query:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
          F  +EV  IL IPL  ++  D +IWH+E+ G+YSVKSGYRL
Subjt:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

M5WJW2 Reverse transcriptase domain-containing protein9.3e-3851.37Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR
        P   ++R+ + RY PS  FL+A VG++PS IW SL WG++LL KG+ WRVG+G  + VY   W+P  SC K+ SP  L L TRV DL T SGQWN  LL+
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLR

Query:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQV
          F  +EV  IL IPL  ++  D +IWH+E+ G+YSVKSGYRL ++
Subjt:  HHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQV

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003104.6e-1038.36Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCL
        +  P   LSR+L+ RY P    ++  VG+ PS  WRS+I GR+LL +G+   +G+G    V+   WI D++ L
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCL

Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein1.4e-0927.54Show/hide
Query:  LKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQ---WNEDLLRHHFSP
        +K RY      LDA V    S  W SL+ G  LL KG    +G+G+ + +   N +       + +  T   +  + +L    G    W++  +      
Subjt:  LKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQ---WNEDLLRHHFSP

Query:  REVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL
         +  FI  I L      DK+IW++   G Y+V+SGY L
Subjt:  REVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRL

AT4G29090.1 Ribonuclease H-like superfamily protein1.4e-1427.94Show/hide
Query:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWI---PDDSCLKV-RSP----ITLDLDTRVADLLTISG
        P   +++V K RY    D L+A +GS PS +W+S+   +++L +G    VGNGE + ++   W+   P  + L++ R P     ++    +V+DL+  SG
Subjt:  PTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWI---PDDSCLKV-RSP----ITLDLDTRVADLLTISG

Query:  -QWNEDLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALLAQTPSSSSVRHCPVGGRGVGKWGSQTKLRFSFGGFAW---SN
         +W +D++   F   E + I  +        D   W +   G Y+VKSGY +    ++ +  S   V    +       W SQT  +     F W   SN
Subjt:  -QWNEDLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALLAQTPSSSSVRHCPVGGRGVGKWGSQTKLRFSFGGFAW---SN

Query:  FLPL
         LP+
Subjt:  FLPL

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.3e-1138.36Show/hide
Query:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCL
        +  P   LSR+L+ RY P    ++  VG+ PS  WRS+I GR+LL +G+   +G+G    V+   WI D++ L
Subjt:  VQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKGIHWRVGNGEKVSVYGSNWIPDDSCL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGATGTCGACGAAATTTCGTCGACATGGGGGGAAGATCGAAACTTCCCACCCTTGGAAATGTCGACATGGTCGACATACCGACATTTCCACCGAAATGTCGGAC
ATTAGTAGGCCAATGGCGCGATTCTGGTGAAATGGGGACAAGGAGGATAGAAGAATCCATTGGTGTTGGAGGGTTTGTTCAGTATCCTACCTTGTTTCTCTCCCGTGTGT
TGAAGGGGCGGTATTGTCCTAGTGGAGACTTCCTGGATGCAGGGGTGGGTTCCCACCCCTCGAATATTTGGAGGAGCCTGATTTGGGGGAGGAAACTATTGGGAAAGGGT
ATTCACTGGAGGGTTGGGAATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATTCCTGCCTTAAGGTGCGGTCCCCGATTACTTTGGATCTTGATAC
TCGAGTGGCTGATCTTCTTACTATTTCAGGTCAGTGGAATGAGGATCTTCTTCGGCATCACTTTAGTCCTCGCGAGGTACGCTTTATCCTTACTATTCCCTTGCGGCATA
TATCGTCTGAGGATAAAGTCATATGGCATTTCGAGAAGTGTGGGGTATATTCGGTCAAGAGTGGGTACCGGCTTGGCCAGGTGGCTTTGCTTGCTCAAACCCCATCTTCG
TCTTCAGTGAGGCACTGTCCAGTTGGTGGAAGGGGTGTTGGAAAATGGGGATCCCAAACAAAATTAAGATTTTCTTTTGGAGGCTTTGCTTGGAGCAACTTCCTACCGTT
GATAATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGATGTCGACGAAATTTCGTCGACATGGGGGGAAGATCGAAACTTCCCACCCTTGGAAATGTCGACATGGTCGACATACCGACATTTCCACCGAAATGTCGGAC
ATTAGTAGGCCAATGGCGCGATTCTGGTGAAATGGGGACAAGGAGGATAGAAGAATCCATTGGTGTTGGAGGGTTTGTTCAGTATCCTACCTTGTTTCTCTCCCGTGTGT
TGAAGGGGCGGTATTGTCCTAGTGGAGACTTCCTGGATGCAGGGGTGGGTTCCCACCCCTCGAATATTTGGAGGAGCCTGATTTGGGGGAGGAAACTATTGGGAAAGGGT
ATTCACTGGAGGGTTGGGAATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATTCCTGCCTTAAGGTGCGGTCCCCGATTACTTTGGATCTTGATAC
TCGAGTGGCTGATCTTCTTACTATTTCAGGTCAGTGGAATGAGGATCTTCTTCGGCATCACTTTAGTCCTCGCGAGGTACGCTTTATCCTTACTATTCCCTTGCGGCATA
TATCGTCTGAGGATAAAGTCATATGGCATTTCGAGAAGTGTGGGGTATATTCGGTCAAGAGTGGGTACCGGCTTGGCCAGGTGGCTTTGCTTGCTCAAACCCCATCTTCG
TCTTCAGTGAGGCACTGTCCAGTTGGTGGAAGGGGTGTTGGAAAATGGGGATCCCAAACAAAATTAAGATTTTCTTTTGGAGGCTTTGCTTGGAGCAACTTCCTACCGTT
GATAATTTGA
Protein sequenceShow/hide protein sequence
MSRCRRNFVDMGGRSKLPTLGNVDMVDIPTFPPKCRTLVGQWRDSGEMGTRRIEESIGVGGFVQYPTLFLSRVLKGRYCPSGDFLDAGVGSHPSNIWRSLIWGRKLLGKG
IHWRVGNGEKVSVYGSNWIPDDSCLKVRSPITLDLDTRVADLLTISGQWNEDLLRHHFSPREVRFILTIPLRHISSEDKVIWHFEKCGVYSVKSGYRLGQVALLAQTPSS
SSVRHCPVGGRGVGKWGSQTKLRFSFGGFAWSNFLPLII