CuGenDBv2

Gene ID	Lcy06g016730
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ubiquitin carboxyl-terminal hydrolase 4
Genome location	Chr06:38263031..38272031
RNA-Seq Expression	Lcy06g016730
Synteny	Lcy06g016730
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6599044.1 hypothetical protein SDJN03_08822, partial [Cucurbita argyrosperma subsp. sororia]

2.7e-30

87.18

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSP+LKELLERSK+NKEKN QKI DKYCIRGAEWGVGDC AEGMSPEER+NFI+MLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

KAG7029989.1 hypothetical protein SDJN02_08333, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-30

88.46

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSP+LKELLERSK+NKEKN QKI DKYCIRGAEWGVGDC AEGMSPEERENFI+MLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

XP_008465700.1 PREDICTED: uncharacterized protein LOC103503323 [Cucumis melo]

9.2e-31

89.74

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSPLLKELLERSK+NKEKN QKIVDKYCIRGAEWGVGDC AEGMSPEER+ FISMLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

XP_022999560.1 uncharacterized protein LOC111493888 [Cucurbita maxima]

9.2e-31

88.46

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSP+LKELLERSK+NKEKN QKIVDKYCIRGAEWGVGDC AEGMSPEER+NFI+MLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

XP_038889576.1 uncharacterized protein LOC120079457 [Benincasa hispida]

7.0e-31

88.46

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSPLLKELLERSK+NKEKN QKI++KYCIRGAEWGVGDC AEGMSPEER+NFISMLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPH3 uncharacterized protein LOC103503323

4.4e-31

89.74

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSPLLKELLERSK+NKEKN QKIVDKYCIRGAEWGVGDC AEGMSPEER+ FISMLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

A0A5A7TEV5 Uncharacterized protein

4.4e-31

89.74

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSPLLKELLERSK+NKEKN QKIVDKYCIRGAEWGVGDC AEGMSPEER+ FISMLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

A0A6J1D9L5 uncharacterized protein LOC111018499

1.7e-30

88.46

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY E+DARFKSSPLLKELLERSKLNKEKN QKI DKYCIRGAEWGVGDC AEGMSPEER+NFIS LK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

A0A6J1G3L6 uncharacterized protein LOC111450455

1.7e-30

85.9

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSP+LKELLERSK+NKEKN QKI DKYCIRGAEWGVGDC AEGMSPEER+NF++MLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

A0A6J1KFQ6 uncharacterized protein LOC111493888

4.4e-31

88.46

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Query:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +ENQKKY EADARFKSSP+LKELLERSK+NKEKN QKIVDKYCIRGAEWGVGDC AEGMSPEER+NFI+MLK+KAGVD
Subjt:  KENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G03420.1 unknown protein

7.2e-26

70.13

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Query:  ENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD
        +NQK Y E DARFK SPLLK+LLE SKLNKEKN ++I DKYC+RGAEWGVGDC   GM+ EE+E FI+MLK+K GV+
Subjt:  ENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

Sequences

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CDS sequence

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ATGTCATTGGAGGAGTTGAGCCACCCATATTCTCAACTACCCCAAGGTTTGGGAAAACACCTGTTTAGGGTTTCCCAAACCCCCGTTTTTGTTGCCTTACACGCCGCTTT
CTCAACACCCTATTTCGGTAACACGCTTCCTCTCTCTCTTTGGTTTCCTTCGCTCGTCTGTCCTTATCCCTTTCCTTTCTTCCGCGACCATTTGCTCGAATTCCATCTGC
TGCCTTTCTGCCCTCTGAAAGTTCCTACAACCTTCACAACAATTTCCGATTCACTTCCATGGAGAAACCTACAAATTCTTTTACTTCTCGCTCCGCATCGTCTTCTTCAC
TGTGCTCGCCAGTTCTTCAAACACCCTCTTTCGATAACACGCTTCCTCTCTCTCTGGTTTCCTTCGCTCGTCTGTCCTGATCCCTTCCCTTTCTTCCGCGACCATTTGCT
CGAATTCCATCCACTGCCTTTCTGCCCTCTAAAAGTTCTTACAACCTTCACAACAATTTCTGATTCACTTCCATGGAGAAACCTGCAAATTCTTTTACTCTCGCTCCGCA
TCGACTTCTTCATTGTGCTCGCCAGTTCTTCACAAATCCATTGTGTTGGCTGCCTCGATTGCCCTTCTCATGTGGCCGACTCCAGCGAACGTCGGATTTCTGTCAGGATT
CTCGGGAATCGAGTCAAAGAAAACCAGAAGAAATACGTCGAAGCTGATGCCAGATTCAAATCATCTCCTCTGTTGAAGGAACTTCTAGAGCGATCGAAGTTGAACAAGGA
AAAGAACTGTCAGAAAATTGTTGATAAATATTGCATCCGTGGAGCCGAATGGGGAGTTGGGGATTGCTTGGCAGAGGGCATGTCGCCTGAGGAAAGGGAGAATTTCATCT
CAATGTTGAAGCGAAAGGCTGGAGTGGATTAA

mRNA sequence

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Protein sequence

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MSLEELSHPYSQLPQGLGKHLFRVSQTPVFVALHAAFSTPYFGNTLPLSLWFPSLVCPYPFPFFRDHLLEFHLLPFCPLKVPTTFTTISDSLPWRNLQILLLLAPHRLLH
CARQFFKHPLSITRFLSLWFPSLVCPDPFPFFRDHLLEFHPLPFCPLKVLTTFTTISDSLPWRNLQILLLSLRIDFFIVLASSSQIHCVGCLDCPSHVADSSERRISVRI
LGNRVKENQKKYVEADARFKSSPLLKELLERSKLNKEKNCQKIVDKYCIRGAEWGVGDCLAEGMSPEERENFISMLKRKAGVD

Lcy06g016730 (gene) of Sponge gourd (P93075) v1 genome