; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g016800 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g016800
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSWIM-type domain-containing protein
Genome locationChr06:38609373..38610068
RNA-Seq ExpressionLcy06g016800
SyntenyLcy06g016800
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23827.1 MuDR family transposase [Cucumis melo var. makuwa]1.8e-3743.33Show/hide
Query:  MLRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVN
        M   IR  L  + F KW+RAY +++RY++MTTNISES NA +KE+R+LPV+++L+ +R +LQ WF+ RR       T  T   E  LR + +  RS  VN
Subjt:  MLRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVN

Query:  PVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESS
         +++++FQVIDG  Q+ V L  K C+CR+WD+ EIPC+HA +VL  ++++   + S+++LS TL S Y+G + P+G+ ++
Subjt:  PVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESS

XP_008465177.1 PREDICTED: uncharacterized protein LOC103502841 [Cucumis melo]4.2e-5067.59Show/hide
Query:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD
        GIR+EL++IGF+KWSRAYS  RRY +MTTNISES N+ + +ARELP+ SMLE LRMMLQRWFF+ RN+  +Q TDFTK+IE  LR++IE  RS++VNPV+
Subjt:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD

Query:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH
        NM++QVIDG SQY ++L TK CSCRMWDILEIPC+H C+V T KH
Subjt:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH

XP_022134813.1 uncharacterized protein LOC111006994 [Momordica charantia]4.2e-4251.87Show/hide
Query:  LRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNP
        +RGIR+EL  IGFSKWS A+SS  RY  MTTNISES NA +K+ARELP++SMLEV+RMMLQRWF++R+N   FQ T+FTKS+EK LRE+I  GR+M V  
Subjt:  LRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNP

Query:  VDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ
        V+N  +QVID   Q + HL T                             K Y S +Y +  L S YSG IHPLGH+SSW IPE+ +
Subjt:  VDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ

XP_038880504.1 uncharacterized protein LOC120072166 [Benincasa hispida]5.4e-3742.37Show/hide
Query:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN
        IR+ L  +GF KW+ A+S +R Y +MTTNISE  N  +KE RE PV+S+L+ +R +LQ WF+++   T       T   E  LRE+  + RS +V+P++N
Subjt:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN

Query:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSW
         +++VIDG + + V+L  K CSCR+WD++EIPC+HAC+V+   ++ I  +   +Y   TL S Y G ++P+G+ S W
Subjt:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSW

XP_038907134.1 uncharacterized protein LOC120092945 [Benincasa hispida]2.2e-3842.37Show/hide
Query:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN
        IR+ L  +GF KW+RAYS ++RY++MTTNISES ++ ++E+RE P++S+L+ +R +LQ WF++R    S   T  T   E  LR++  + R+ +V+ ++N
Subjt:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN

Query:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSW
         +++V+DG + Y V++ +K CSC  WD+ EIPC+HAC+VL+  ++    + S +Y S T SS Y   IHP+G+ S W
Subjt:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSW

TrEMBL top hitse value%identityAlignment
A0A1S3CNA2 uncharacterized protein LOC1035028412.0e-5067.59Show/hide
Query:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD
        GIR+EL++IGF+KWSRAYS  RRY +MTTNISES N+ + +ARELP+ SMLE LRMMLQRWFF+ RN+  +Q TDFTK+IE  LR++IE  RS++VNPV+
Subjt:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD

Query:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH
        NM++QVIDG SQY ++L TK CSCRMWDILEIPC+H C+V T KH
Subjt:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH

A0A5D3BD68 SWIM-type domain-containing protein4.4e-3743.58Show/hide
Query:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN
        IR  L  +GF +WSRAYS +RRY+IMTTNI ES N+ +K  R+LPV+S+LE +R  LQRWF++RR   S   +  +   E  +R+ +++ RS  VNPV  
Subjt:  IRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDN

Query:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWII
        ++FQV+DG   + V L    CSC  WD+ EIPC+HA  V+ + +++   + SQ+Y +  LS+ Y GL+ P+G+ + W +
Subjt:  MQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWII

A0A5D3CGP0 SWIM-type domain-containing protein2.0e-5067.59Show/hide
Query:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD
        GIR+EL++IGF+KWSRAYS  RRY +MTTNISES N+ + +ARELP+ SMLE LRMMLQRWFF+ RN+  +Q TDFTK+IE  LR++IE  RS++VNPV+
Subjt:  GIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVD

Query:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH
        NM++QVIDG SQY ++L TK CSCRMWDILEIPC+H C+V T KH
Subjt:  NMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKH

A0A5D3DJR8 MuDR family transposase8.9e-3843.33Show/hide
Query:  MLRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVN
        M   IR  L  + F KW+RAY +++RY++MTTNISES NA +KE+R+LPV+++L+ +R +LQ WF+ RR       T  T   E  LR + +  RS  VN
Subjt:  MLRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVN

Query:  PVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESS
         +++++FQVIDG  Q+ V L  K C+CR+WD+ EIPC+HA +VL  ++++   + S+++LS TL S Y+G + P+G+ ++
Subjt:  PVDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESS

A0A6J1C328 uncharacterized protein LOC1110069942.1e-4251.87Show/hide
Query:  LRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNP
        +RGIR+EL  IGFSKWS A+SS  RY  MTTNISES NA +K+ARELP++SMLEV+RMMLQRWF++R+N   FQ T+FTKS+EK LRE+I  GR+M V  
Subjt:  LRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNP

Query:  VDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ
        V+N  +QVID   Q + HL T                             K Y S +Y +  L S YSG IHPLGH+SSW IPE+ +
Subjt:  VDNMQFQVIDGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64260.1 MuDR family transposase4.9e-0420.83Show/hide
Query:  KELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQ----RWFFKRRNETSFQATD----FTKSIEKHLREEIEKGRSMQ
        K L  I   KW+ A+ S  RY I+  +    F  C    R  P  ++     +ML     R  F +   + + + +    +T+     L E +       
Subjt:  KELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQ----RWFFKRRNETSFQATD----FTKSIEKHLREEIEKGRSMQ

Query:  VNPVDNMQFQVIDGT--SQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ
        +  ++   F+V + +   ++ V L    C+CR +   + PC HA +V     ++  +Y  + Y  +     Y+    P+   ++W  PE+ +
Subjt:  VNPVDNMQFQVIDGT--SQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGAGGTATACGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTCTCGTGCTTATTCTTCTCAACGTCGATATAAGATAATGACCACTAACATATCTGAGTC
TTTCAATGCTTGCATTAAGGAAGCAAGGGAGTTACCTGTTTCATCTATGTTGGAAGTTCTACGAATGATGCTACAGAGATGGTTCTTCAAAAGACGGAATGAAACATCTT
TCCAAGCAACAGATTTTACAAAATCTATTGAGAAGCATCTACGAGAAGAAATAGAGAAGGGTCGATCAATGCAGGTAAACCCAGTTGACAATATGCAATTTCAAGTGATC
GATGGGACGAGTCAGTATGATGTTCACTTAACAACCAAGAGGTGTAGCTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGCTCTGTCTTGACAACCAA
GCACGTATCCATCAAGGAGTATACATCCCAATTCTACCTTAGCAAAACTCTATCTTCTATATACAGTGGTTTAATTCATCCCTTAGGGCATGAGTCTAGCTGGATTATTC
CTGAAGAGGCCCAAGAAGATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGAGGTATACGTAAGGAGTTGCAAACTATAGGCTTTTCCAAGTGGTCTCGTGCTTATTCTTCTCAACGTCGATATAAGATAATGACCACTAACATATCTGAGTC
TTTCAATGCTTGCATTAAGGAAGCAAGGGAGTTACCTGTTTCATCTATGTTGGAAGTTCTACGAATGATGCTACAGAGATGGTTCTTCAAAAGACGGAATGAAACATCTT
TCCAAGCAACAGATTTTACAAAATCTATTGAGAAGCATCTACGAGAAGAAATAGAGAAGGGTCGATCAATGCAGGTAAACCCAGTTGACAATATGCAATTTCAAGTGATC
GATGGGACGAGTCAGTATGATGTTCACTTAACAACCAAGAGGTGTAGCTGTCGGATGTGGGACATCTTGGAAATTCCGTGTTCTCATGCATGCTCTGTCTTGACAACCAA
GCACGTATCCATCAAGGAGTATACATCCCAATTCTACCTTAGCAAAACTCTATCTTCTATATACAGTGGTTTAATTCATCCCTTAGGGCATGAGTCTAGCTGGATTATTC
CTGAAGAGGCCCAAGAAGATTAG
Protein sequenceShow/hide protein sequence
MLRGIRKELQTIGFSKWSRAYSSQRRYKIMTTNISESFNACIKEARELPVSSMLEVLRMMLQRWFFKRRNETSFQATDFTKSIEKHLREEIEKGRSMQVNPVDNMQFQVI
DGTSQYDVHLTTKRCSCRMWDILEIPCSHACSVLTTKHVSIKEYTSQFYLSKTLSSIYSGLIHPLGHESSWIIPEEAQED