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Lcy06g017650 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g017650
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationChr06:40635425..40635811
RNA-Seq ExpressionLcy06g017650
SyntenyLcy06g017650
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0043229 - intracellular organelle (cellular component)
GO:0097159 - organic cyclic compound binding (molecular function)
GO:1901363 - heterocyclic compound binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70928.1 hypothetical protein VITISV_016057 [Vitis vinifera]8.3e-2643.41Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F +WW      +WEG++ M KL+F+++ LK WNK  FG ++ +K  +L+ I  ID +E++G L  +L  +R+ +K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN   FH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
CAN82413.1 hypothetical protein VITISV_039150 [Vitis vinifera]1.4e-2544.96Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F SWW       WEG++ M KL+F+++ LK WNK  FG ++ +K+ +L+ I  ID +E++G L  +L  +R+  K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN  FFH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
KAA0057384.1 hypothetical protein E6C27_scaffold280G002530 [Cucumis melo var. makuwa]9.5e-3053.66Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWLEH   K++F SWW++   G+W GY  M KLR L+  L+ WN EVFGDI+VK +E++ RI++ID  E D P D +LKGER  LK +F  +IK E ISW
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLA
         +KAKVKWAK   C+  FF+R A
Subjt:  RQKAKVKWAKDNDCNLAFFHRLA
RVX19336.1 putative mitochondrial protein [Vitis vinifera]2.9e-2644.96Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F SWW       WEG++ M KL+F+++ LK WNK  FG ++ +K+ +L+ I  ID +E++G L  NL  +R+  K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN   FH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
TYK03178.1 hypothetical protein E5676_scaffold11G00830 [Cucumis melo var. makuwa]3.4e-2757.84Show/hide
Query:  GKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHR
        G+W+GYR M KLR L + L+ WN++VFGDI++KK+EV+ RI EID LE +GPLD  LK ER+S K + A +I+KE +SW QK+K+KW K+ DCN +FFHR
Subjt:  GKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHR

Query:  LA
         A
Subjt:  LA
TrEMBL top hitse value%identityAlignment
A0A438KDP4 Putative mitochondrial protein1.4e-2644.96Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F SWW       WEG++ M KL+F+++ LK WNK  FG ++ +K+ +L+ I  ID +E++G L  NL  +R+  K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN   FH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
A0A5A7UQK0 Uncharacterized protein4.6e-3053.66Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWLEH   K++F SWW++   G+W GY  M KLR L+  L+ WN EVFGDI+VK +E++ RI++ID  E D P D +LKGER  LK +F  +IK E ISW
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLA
         +KAKVKWAK   C+  FF+R A
Subjt:  RQKAKVKWAKDNDCNLAFFHRLA
A0A5D3BW32 Uncharacterized protein1.6e-2757.84Show/hide
Query:  GKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHR
        G+W+GYR M KLR L + L+ WN++VFGDI++KK+EV+ RI EID LE +GPLD  LK ER+S K + A +I+KE +SW QK+K+KW K+ DCN +FFHR
Subjt:  GKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHR

Query:  LA
         A
Subjt:  LA
A5AP81 Reverse transcriptase domain-containing protein6.9e-2644.96Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F SWW       WEG++ M KL+F+++ LK WNK  FG ++ +K+ +L+ I  ID +E++G L  +L  +R+  K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN  FFH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
A5C6D8 Reverse transcriptase domain-containing protein4.0e-2643.41Show/hide
Query:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW
        MWL+H   K  F +WW      +WEG++ M KL+F+++ LK WNK  FG ++ +K  +L+ I  ID +E++G L  +L  +R+ +K E   LI +E I W
Subjt:  MWLEH--LKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISW

Query:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        RQKAKVKW KD DCN   FH++A   + R
Subjt:  RQKAKVKWAKDNDCNLAFFHRLAMAEEAR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein1.2e-0629.29Show/hide
Query:  LRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLK--IEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHRLAMAEEAR
        L+  +   K  N++ FG+I+ K +E L+ ++ I +     P D   + E ++ K    FA  ++     +RQK+++KW +D D N  FFH++ +A +A+
Subjt:  LRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLK--IEFANLIKKETISWRQKAKVKWAKDNDCNLAFFHRLAMAEEAR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTGGAGCACCTTAAGTCCTCATTTCCTTCCTGGTGGAATGTGGAGGCCTCAGGTAAGTGGGAAGGCTACAGGCTTATGGGTAAGTTAAGGTTTCTCAGA
AGTACCCTTAAATCGTGGAATAAAGAGGTCTTTGGGGACATTAGAGTGAAGAAGCAAGAAGTGTTAAATAGGATTAAAGAGATTGATACTCTGGAAGAGGATGGT
CCGTTGGATGAGAACCTCAAGGGAGAGCGCCTCTCCCTCAAAATTGAGTTCGCTAACTTGATCAAGAAAGAGACTATCAGTTGGAGGCAAAAGGCCAAGGTTAAA
TGGGCCAAGGACAACGATTGTAATTTGGCCTTTTTTCATAGATTGGCTATGGCAGAAGAAGCAAGAACATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTTGGAGCACCTTAAGTCCTCATTTCCTTCCTGGTGGAATGTGGAGGCCTCAGGTAAGTGGGAAGGCTACAGGCTTATGGGTAAGTTAAGGTTTCTCAGA
AGTACCCTTAAATCGTGGAATAAAGAGGTCTTTGGGGACATTAGAGTGAAGAAGCAAGAAGTGTTAAATAGGATTAAAGAGATTGATACTCTGGAAGAGGATGGT
CCGTTGGATGAGAACCTCAAGGGAGAGCGCCTCTCCCTCAAAATTGAGTTCGCTAACTTGATCAAGAAAGAGACTATCAGTTGGAGGCAAAAGGCCAAGGTTAAA
TGGGCCAAGGACAACGATTGTAATTTGGCCTTTTTTCATAGATTGGCTATGGCAGAAGAAGCAAGAACATGA
Protein sequenceShow/hide protein sequence
MWLEHLKSSFPSWWNVEASGKWEGYRLMGKLRFLRSTLKSWNKEVFGDIRVKKQEVLNRIKEIDTLEEDGPLDENLKGERLSLKIEFANLIKKETISWRQKAKVK
WAKDNDCNLAFFHRLAMAEEART