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Lcy06g017740 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g017740
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr06:40851710..40852613
RNA-Seq ExpressionLcy06g017740
SyntenyLcy06g017740
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA94760.1 Protein kinase domain containing protein, expressed [Oryza sativa Japonica Group]1.7e-0536.96Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI
        KGG+G ++RD+SGS + A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSE+A +V  I  +
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI

KAG6599977.1 hypothetical protein SDJN03_05210, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0433.65Show/hide
Query:  EGRKGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEIS-KGE
        E  KGG+ W+I DS GS +   C ++ +KW +K++E +A++EGLK YL   +RE        ++  + A ++N   + + DL E++ +VD I ++     
Subjt:  EGRKGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEIS-KGE

Query:  VISF
        +ISF
Subjt:  VISF

XP_021753633.1 uncharacterized protein LOC110719026 [Chenopodium quinoa]2.2e-0535.63Show/hide
Query:  GLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAI
        GLG ++RD  G ++  G  QI   W +++ EA+A+  GL+    + VR+       L+VE+D   V+ A+K++  DLSE+++I+D I
Subjt:  GLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAI

XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]2.9e-0532.67Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEISKG-EVIS
        +GG+GW+IR   G ++ AG   ++   ++K++EA A+LEGL+   ++      G  RPL +ETDSA V + +  + +DL++   +V+ I  +    E+++
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEISKG-EVIS

Query:  F
        F
Subjt:  F

XP_025877173.1 uncharacterized protein LOC107278050 isoform X1 [Oryza sativa Japonica Group]1.7e-0536.96Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI
        KGG+G ++RD+SGS + A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSE+A +V  I  +
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI

TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224031.4e-0532.67Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEISKG-EVIS
        +GG+GW+IR   G ++ AG   ++   ++K++EA A+LEGL+   ++      G  RPL +ETDSA V + +  + +DL++   +V+ I  +    E+++
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEISKG-EVIS

Query:  F
        F
Subjt:  F

B8BNT6 Uncharacterized protein2.6e-0436.9Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAM
        KGG+  ++RD+SGS + A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSEV +
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAM

C7J8D0 Os11g0106066 protein2.6e-0436.9Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAM
        KGG+  ++RD+SGS + A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSEV +
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAM

I1Q6R4 RNase H domain-containing protein2.6e-0437.35Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVA
        KGG+  ++RD+SGS++ A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSE+A
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVA

Q2R147 Protein kinase domain containing protein, expressed8.1e-0636.96Show/hide
Query:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI
        KGG+G ++RD+SGS + A C  +D   +    E +A +EGL   L   +       RP+++ETD   +VN +K+ N DLSE+A +V  I  +
Subjt:  KGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAMIVDAIDEI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCAGCTGGCCAGCGGAGGTCGGCAGCGTTCGGTAGTCGGAGGTTGACTGGGCAGTTGGTCCGAGAAGGCAGAAAAGGGGGATTGGGTTGGTTAATTCGTGACTC
CTCTGGATCTTTGCTAGGAGCGGGCTGCATCCAAATTGACAAGAAGTGGTCGATCAAGGTTATGGAAGCTCAAGCGGTGCTTGAAGGTTTAAAGGCCTACCTTTCGATGG
CCGTAAGAGAAGATGAGGGGGCCAGACGCCCCCTTATGGTCGAGACTGATTCTGCCTGTGTTGTGAATGCAATCAAGGACAGGAATGATGATTTGTCGGAGGTGGCGATG
ATCGTGGACGCCATCGACGAGATTTCCAAAGGAGAAGTCATCTCCTTTGGCTTCTGCAGAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCAGCTGGCCAGCGGAGGTCGGCAGCGTTCGGTAGTCGGAGGTTGACTGGGCAGTTGGTCCGAGAAGGCAGAAAAGGGGGATTGGGTTGGTTAATTCGTGACTC
CTCTGGATCTTTGCTAGGAGCGGGCTGCATCCAAATTGACAAGAAGTGGTCGATCAAGGTTATGGAAGCTCAAGCGGTGCTTGAAGGTTTAAAGGCCTACCTTTCGATGG
CCGTAAGAGAAGATGAGGGGGCCAGACGCCCCCTTATGGTCGAGACTGATTCTGCCTGTGTTGTGAATGCAATCAAGGACAGGAATGATGATTTGTCGGAGGTGGCGATG
ATCGTGGACGCCATCGACGAGATTTCCAAAGGAGAAGTCATCTCCTTTGGCTTCTGCAGAAGATAG
Protein sequenceShow/hide protein sequence
MVAAGQRRSAAFGSRRLTGQLVREGRKGGLGWLIRDSSGSLLGAGCIQIDKKWSIKVMEAQAVLEGLKAYLSMAVREDEGARRPLMVETDSACVVNAIKDRNDDLSEVAM
IVDAIDEISKGEVISFGFCRR