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Lcy06g017890 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g017890
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionArabinogalactan peptide 23
Genome locationChr06:41242370..41243423
RNA-Seq ExpressionLcy06g017890
SyntenyLcy06g017890
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044702 - Arabinogalactan protein 23/40


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043704.1 Arabinogalactan peptide 23 [Cucumis melo var. makuwa]6.0e-1180.95Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        MDMKKVTCAVLVAAAAVSA MA+ EGPAPAP  SS    A AALPAVGAFIGASL S FAYYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL

KAG7027762.1 hypothetical protein SDJN02_08939, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-0972.31Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQS
        M MKKVTCA+L AAA VSA +AS E PA APGPSS   +AAAA+PAVGAFIGAS+A+LFAYYL++
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQS

KCW90250.1 hypothetical protein EUGRSUZ_A02403, partial [Eucalyptus grandis]1.6e-0865.62Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ
        MDMKK++CAVLVAAA++SA +AS + PAPAPGPSS    A+AALP  G+ +GAS+ S FAYYLQ
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ

XP_022743058.1 arabinogalactan peptide 23-like [Durio zibethinus]4.7e-0859.38Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ
        MDM+K++CAV+VAAA++SA MAS + PA APGPS+A ++ ++ LP +G+ +GASL S FAYYLQ
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ

XP_038906349.1 arabinogalactan protein 23 [Benincasa hispida]3.2e-1284.13Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        MDMKKVTCAVLV+AA +SA MASGEGPAPAPG SS   +AAAALPAVGAFIGASLAS FAYYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL

TrEMBL top hitse value%identityAlignment
A0A059DIY4 Uncharacterized protein (Fragment)7.9e-0965.62Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ
        MDMKK++CAVLVAAA++SA +AS + PAPAPGPSS    A+AALP  G+ +GAS+ S FAYYLQ
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ

A0A1R3GYJ0 Arabinogalactan peptide 23-like protein2.3e-0861.54Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQS
        MDMKK++CAV+VAAA++SAA+A+G+ PA APGP+S    AA+ALP +G+ +GASL S  AYYLQ+
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQS

A0A1R3HIL4 Arabinogalactan peptide 23-like protein3.0e-0860.94Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ
        MDMKK++CAV+VAAA++SAA+A+G+ PA APGP++++  AA+ALP +G+ +GASL S  AYYLQ
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ

A0A5D3DQ83 Arabinogalactan peptide 232.9e-1180.95Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        MDMKKVTCAVLVAAAAVSA MA+ EGPAPAP  SS    A AALPAVGAFIGASL S FAYYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL

A0A6P5YRB0 arabinogalactan peptide 23-like2.3e-0859.38Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ
        MDM+K++CAV+VAAA++SA MAS + PA APGPS+A ++ ++ LP +G+ +GASL S FAYYLQ
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQ

SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 237.6e-0961.9Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        M+MKK+ C VL AAA+++A MA+ E  APAPGP+SA   A+AALPA+G+ +GASL SLF+YYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL

Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)8.6e-0857.14Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        M+MKK+ C V+ AAA+++A MA+  G APAPGP  A + A+ A+PA+G+ +GASL SLFAYYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL

AT3G57690.1 arabinogalactan protein 235.4e-1061.9Show/hide
Query:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL
        M+MKK+ C VL AAA+++A MA+ E  APAPGP+SA   A+AALPA+G+ +GASL SLF+YYL
Subjt:  MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATGAAGAAGGTCACCTGCGCCGTCCTCGTCGCCGCTGCTGCCGTGAGTGCTGCCATGGCCTCCGGTGAAGGCCCGGCTCCCGCCCCCGGCCCGTCCTCC
GCCGAAGCCTCCGCTGCTGCTGCTTTGCCAGCTGTTGGAGCCTTCATTGGTGCTTCCCTTGCATCTTTGTTTGCCTACTACTTACAATCTATGGCCATCCTGGAT
TGGCAACTTGAGCTAGAAATTCAACCCTTGAACAATGCTTCCCTATTCACTAGTCACAAATTTGGGATCATGGTACCATTAAACTCTAATGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATGAAGAAGGTCACCTGCGCCGTCCTCGTCGCCGCTGCTGCCGTGAGTGCTGCCATGGCCTCCGGTGAAGGCCCGGCTCCCGCCCCCGGCCCGTCCTCC
GCCGAAGCCTCCGCTGCTGCTGCTTTGCCAGCTGTTGGAGCCTTCATTGGTGCTTCCCTTGCATCTTTGTTTGCCTACTACTTACAATCTATGGCCATCCTGGAT
TGGCAACTTGAGCTAGAAATTCAACCCTTGAACAATGCTTCCCTATTCACTAGTCACAAATTTGGGATCATGGTACCATTAAACTCTAATGCTTAA
Protein sequenceShow/hide protein sequence
MDMKKVTCAVLVAAAAVSAAMASGEGPAPAPGPSSAEASAAAALPAVGAFIGASLASLFAYYLQSMAILDWQLELEIQPLNNASLFTSHKFGIMVPLNSNA