CuGenDBv2

Gene ID	Lcy06g018010
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DDE Tnp4 domain-containing protein
Genome location	Chr06:41470926..41472290
RNA-Seq Expression	Lcy06g018010
Synteny	Lcy06g018010
Gene Ontology terms	GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR040344 - Uncharacterized protein At3g17950-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6584313.1 hypothetical protein SDJN03_20245, partial [Cucurbita argyrosperma subsp. sororia]

7.2e-45

77.42

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQT+E+ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

XP_016899568.1 PREDICTED: uncharacterized protein At3g17950 isoform X2 [Cucumis melo]

7.9e-44

76.61

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SA G    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

XP_022924210.1 uncharacterized protein At3g17950 [Cucurbita moschata]

3.2e-45

78.23

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

XP_023520118.1 uncharacterized protein At3g17950-like [Cucurbita pepo subsp. pepo]

7.2e-45

77.42

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH+AA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

XP_038895169.1 uncharacterized protein At3g17950 [Benincasa hispida]

4.6e-44

76.61

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA A+     GGSRKSKK KRKT+TAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVVA DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPA+TE++ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPP8 uncharacterized protein At3g17950 isoform X1

3.8e-44

76.61

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SA G    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

A0A1S4DUB1 uncharacterized protein At3g17950 isoform X2

3.8e-44

76.61

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SA G    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

A0A5D3BLI7 Putative nuclease HARBI1

3.8e-44

76.61

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA  +     GGSRKSKK KRKTTTAP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAFYGNAVDLEGVV  DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SA G    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

A0A6J1E8Y2 uncharacterized protein At3g17950

1.6e-45

78.23

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQHAAA A+     GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+GNAVDLEGVV+ DQQRNGR+LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

A0A6J1KNQ0 uncharacterized protein At3g17950-like

3.2e-43

77.42

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Query:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF
        +V ++NRDQH AA  + AG  GGSRKSKKPKRKTT AP LVADRKRRWWRLCRDDGVKP SL +FLEVERRF DGAF+ NAVDLEGVV+ DQQRNGR LF
Subjt:  KVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEVERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLF

Query:  ADGRVLPPAQTEEEASAAGLYADF
        ADGRVLPPAQTEE+ SAAG    F
Subjt:  ADGRVLPPAQTEEEASAAGLYADF

SwissProt top hits

e value

%identity

Alignment

Q6DR24 Uncharacterized protein At3g17950

2.7e-10

40.16

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Query:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ
        A + AS +  R   ++ + P       P     R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQ
Subjt:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ

Query:  Q--RNGRNLFADGRVLPPAQTE
        Q     R LFADGRVLPPA  E
Subjt:  Q--RNGRNLFADGRVLPPAQTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G17950.1 unknown protein

1.9e-11

40.16

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Query:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ
        A + AS +  R   ++ + P       P     R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQ
Subjt:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ

Query:  Q--RNGRNLFADGRVLPPAQTE
        Q     R LFADGRVLPPA  E
Subjt:  Q--RNGRNLFADGRVLPPAQTE

AT3G17950.2 unknown protein

1.9e-11

40.16

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Query:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ
        A + AS +  R   ++ + P       P     R+R+WWR CRDD       G+       K +SL ++LEVERRF D A Y +A  +LE  V     DQ
Subjt:  AAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDD-------GV-------KPTSLDDFLEVERRFEDGAFYGNA-VDLEGVVAV---DQ

Query:  Q--RNGRNLFADGRVLPPAQTE
        Q     R LFADGRVLPPA  E
Subjt:  Q--RNGRNLFADGRVLPPAQTE

Sequences

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CDS sequence

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ATGGGAAGAAGAAGATCGAGGGGAGGGCGCTGCTACACGAATGGAGAATGGGAAGAAAAATCGATGGGCGGCGCTGCTACACGAAGAAGAAAAGGGGGCTGCTACACAGA
GAAGAAAATGGGAAGAAAAGTGTGGGCTAGGAACCGAGACCAACACGCCGCCGCGAACGCCTCCGTCGCAGGTGGCAGGGGCGGTTCCCGAAAGAGCAAGAAGCCGAAGA
GAAAAACGACGACGGCGCCGACACTGGTCGCAGATCGGAAGCGGAGGTGGTGGCGGCTGTGCAGGGACGACGGCGTTAAGCCGACATCTCTCGATGATTTTCTCGAGGTG
GAACGGAGATTTGAGGACGGTGCTTTTTATGGCAACGCAGTGGATCTGGAAGGCGTGGTTGCGGTGGATCAACAAAGGAATGGGCGGAATTTGTTCGCCGACGGGAGAGT
TCTACCGCCGGCGCAAACAGAGGAAGAAGCCTCGGCGGCGGGGCTCTATGCCGATTTTCCGTATCCCTCATCGGAATTTGCAGCGGCGGTGCCGGCTAAAATGTGGGATT
TGATTTGTCCAGTTTATTTTAAAATATATCATATTTAA

mRNA sequence

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Protein sequence

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MGRRRSRGGRCYTNGEWEEKSMGGAATRRRKGGCYTEKKMGRKVWARNRDQHAAANASVAGGRGGSRKSKKPKRKTTTAPTLVADRKRRWWRLCRDDGVKPTSLDDFLEV
ERRFEDGAFYGNAVDLEGVVAVDQQRNGRNLFADGRVLPPAQTEEEASAAGLYADFPYPSSEFAAAVPAKMWDLICPVYFKIYHI

Lcy06g018010 (gene) of Sponge gourd (P93075) v1 genome