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Lcy06g018190 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g018190
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
Genome locationChr06:41771099..41772721
RNA-Seq ExpressionLcy06g018190
SyntenyLcy06g018190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_018435800.1 PREDICTED: uncharacterized protein LOC108808101 [Raphanus sativus]2.6e-0833.96Show/hide
Query:  IISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDT-NLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGY
        ++   +W  RN   F G+  D    +R    ++E+    +D  N  +  P +  S   WNPPP  S+K N   SWS E+ SGGVGWV+RD   +L+ AG 
Subjt:  IISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDT-NLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGY

Query:  KNFEML
        +   ++
Subjt:  KNFEML
XP_022143317.1 uncharacterized protein LOC111013216 [Momordica charantia]7.5e-0835Show/hide
Query:  LKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIR----ITESNIEDHLKVKDTN--------LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSES
        L +E++  + +I+  IW  RNR  F GE  D Q L R       SNI+    +  T         L   R   +   V W+ PP++  KLN  ASWS E 
Subjt:  LKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIR----ITESNIEDHLKVKDTN--------LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSES

Query:  GSGGVGWVIRDSVGSLILAG
          GG+GW++ D  G ++LAG
Subjt:  GSGGVGWVIRDSVGSLILAG
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]2.6e-0833.05Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHL------IRITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG
        M+   EE+  ++ II+  IW  RN+  F G  P+ + +        I  +    +LK K TN  L + R     +   W PP S+S KLN  A+W +++ 
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHL------IRITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG

Query:  SGGVGWVIRDSVGSLILA
        +GG+GW++RD  G +I A
Subjt:  SGGVGWVIRDSVGSLILA
XP_022155262.1 uncharacterized protein LOC111022403 [Momordica charantia]8.9e-0933.33Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVI
        ++   +EDL    I S  IWN+RN V F GE   +  +I+     + +     +T+L +   ++  +++ W PPP     LNA ASWS  +  GG+GW+I
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVI

Query:  RDSVGSLILAGYKNFEMLVN
        R   G ++LAG +  E   N
Subjt:  RDSVGSLILAGYKNFEMLVN
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]1.7e-0734.75Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSG---ERPDYQHLIR---ITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG
        M+   EE+  ++ II+  IW  RN+  F G   E  D Q +I    I  +  + +LK K  N  L + R     +   W PP S+S KLN  A+W +++ 
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSG---ERPDYQHLIR---ITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG

Query:  SGGVGWVIRDSVGSLILA
        +GG+GW++RD  G +I A
Subjt:  SGGVGWVIRDSVGSLILA
TrEMBL top hitse value%identityAlignment
A0A6J0JJI5 uncharacterized protein LOC1088081011.3e-0833.96Show/hide
Query:  IISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDT-NLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGY
        ++   +W  RN   F G+  D    +R    ++E+    +D  N  +  P +  S   WNPPP  S+K N   SWS E+ SGGVGWV+RD   +L+ AG 
Subjt:  IISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDT-NLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGY

Query:  KNFEML
        +   ++
Subjt:  KNFEML
A0A6J1CP26 uncharacterized protein LOC1110134121.3e-0833.05Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHL------IRITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG
        M+   EE+  ++ II+  IW  RN+  F G  P+ + +        I  +    +LK K TN  L + R     +   W PP S+S KLN  A+W +++ 
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHL------IRITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG

Query:  SGGVGWVIRDSVGSLILA
        +GG+GW++RD  G +I A
Subjt:  SGGVGWVIRDSVGSLILA
A0A6J1CQG0 uncharacterized protein LOC1110132163.7e-0835Show/hide
Query:  LKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIR----ITESNIEDHLKVKDTN--------LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSES
        L +E++  + +I+  IW  RNR  F GE  D Q L R       SNI+    +  T         L   R   +   V W+ PP++  KLN  ASWS E 
Subjt:  LKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIR----ITESNIEDHLKVKDTN--------LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSES

Query:  GSGGVGWVIRDSVGSLILAG
          GG+GW++ D  G ++LAG
Subjt:  GSGGVGWVIRDSVGSLILAG
A0A6J1DNV9 uncharacterized protein LOC1110224034.3e-0933.33Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVI
        ++   +EDL    I S  IWN+RN V F GE   +  +I+     + +     +T+L +   ++  +++ W PPP     LNA ASWS  +  GG+GW+I
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVI

Query:  RDSVGSLILAGYKNFEMLVN
        R   G ++LAG +  E   N
Subjt:  RDSVGSLILAGYKNFEMLVN
A0A6J1DSV1 uncharacterized protein LOC1110236088.1e-0834.75Show/hide
Query:  METLKEEDLIKTAIISLNIWNYRNRVTFSG---ERPDYQHLIR---ITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG
        M+   EE+  ++ II+  IW  RN+  F G   E  D Q +I    I  +  + +LK K  N  L + R     +   W PP S+S KLN  A+W +++ 
Subjt:  METLKEEDLIKTAIISLNIWNYRNRVTFSG---ERPDYQHLIR---ITESNIEDHLKVKDTN--LRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESG

Query:  SGGVGWVIRDSVGSLILA
        +GG+GW++RD  G +I A
Subjt:  SGGVGWVIRDSVGSLILA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-0527Show/hide
Query:  IWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRI--SRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGYKNFE
        IW   N + F+  R  +Q  + +  ++ ++ L    TN +   +R         W+PP    LK N  AS    +   G+GW++R+S G++I  G   F+
Subjt:  IWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRI--SRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILAGYKNFE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACGCTAAAAGAAGAGGACTTGATCAAAACAGCCATAATTTCTTTGAACATTTGGAACTATCGGAACAGAGTGACTTTTTCAGGGGAAAGACCGGACTACCAACA
TCTAATCAGAATCACAGAGTCCAACATTGAAGATCATCTCAAGGTTAAAGATACTAACCTGAGAATTTCTAGACCGGAGAGCCACCAGAGTCAAGTATCTTGGAATCCTC
CTCCTTCCTCCTCATTGAAGCTGAACGCAGGCGCTTCGTGGAGCTCCGAATCAGGATCTGGGGGAGTTGGGTGGGTGATTCGTGACTCCGTGGGATCTCTGATTCTTGCT
GGATACAAAAATTTCGAGATGCTGGTCAATTCTTGCTCTTGA
mRNA sequenceShow/hide mRNA sequence
GGAAGATCAAATGGTGGTGTTCTTTGTTGTTGCAGAGCAATCAAGAATCATTCTTGAAGTATTCAGAGTCGTCGACGGAGGCCTTCGTGGGGAGCGCTCCAATTCTGGGA
TGGATTAATGGAGACGCTAAAAGAAGAGGACTTGATCAAAACAGCCATAATTTCTTTGAACATTTGGAACTATCGGAACAGAGTGACTTTTTCAGGGGAAAGACCGGACT
ACCAACATCTAATCAGAATCACAGAGTCCAACATTGAAGATCATCTCAAGGTTAAAGATACTAACCTGAGAATTTCTAGACCGGAGAGCCACCAGAGTCAAGTATCTTGG
AATCCTCCTCCTTCCTCCTCATTGAAGCTGAACGCAGGCGCTTCGTGGAGCTCCGAATCAGGATCTGGGGGAGTTGGGTGGGTGATTCGTGACTCCGTGGGATCTCTGAT
TCTTGCTGGATACAAAAATTTCGAGATGCTGGTCAATTCTTGCTCTTGAAGCGTTGGCAGTGAAAGAAGGATTGGAGAAGTACCCCTCAATCAGCAGATATATCTCTTGC
CCCATTGTTGTGGAGTCTGATTCCGCCTCTCTGACTCAGCTCCTCAATGGCCAAAATTCCGTTCTCTCCGAGGCAAACAATATGGTGGTCGACATCGAGCACCTGGCGTG
GGAGACGTCTGGCGCATAATTTCATTGGTGCCCGAGAAACATCAATCGAGTTGCTCACTCCTTAGCTCGCCAAGCGAGCTCTTCTTCTTCTCCGATGACTTTTCAGCCGA
GAAGCTTTTGTGCATGCGATGTTTGTTCTTGTTTTTGTGATGTTCAATCTTCCTCCCTTTTGGAAGAGATTTTTTTTTGTAAGAATTCTATTTTGCCTGAGTGGCTGTCC
TCTGTCATTAAAGAGGACCTGTTGGTGTTTGTTGGTAGTTGATCTTAAT
Protein sequenceShow/hide protein sequence
METLKEEDLIKTAIISLNIWNYRNRVTFSGERPDYQHLIRITESNIEDHLKVKDTNLRISRPESHQSQVSWNPPPSSSLKLNAGASWSSESGSGGVGWVIRDSVGSLILA
GYKNFEMLVNSCS