CuGenDBv2

Gene ID	Lcy06g018630
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribonuclease H-like superfamily protein
Genome location	Chr06:42823549..42826579
RNA-Seq Expression	Lcy06g018630
Synteny	Lcy06g018630
Gene Ontology terms	NA
InterPro domains	IPR026960 - Reverse transcriptase zinc-binding domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

2.2e-62

41.83

Show/hide

Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCF+ PK L  + + I ARFWWGSS+   KIHW +W  L + K +GG+GFRDL +FN+ALL+KQ WRI+ + +S+L++VL+GRYFK  +F+ A +  NP
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFT-VSQLLT-GQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEII
        SY WRSILWGRDL KKG RWRIGNG  V    D W+P + + + IL+ P +   + VS L+   +G W   +V+  F   +A+ IL+IPI    +ED +I
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFT-VSQLLT-GQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEII

Query:  WDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKM
        W+ +  G                                        I  KIK+  WR+  D LPT  NL+ RG++    CYFC    E + HLFW CK 
Subjt:  WDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKM

Query:  TKGLWI
         + LWI
Subjt:  TKGLWI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]

1.6e-73

53.48

Show/hide

Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        +SCFK P S+CN+L+ I  RFWWGSS    KIHW+SWK LC+ K+ GG+GFRD++IFNQA+L+KQSWRI+ + DSLL K LRG+YFKTG+FL A LG  P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD
        SY WRSILWGRDLFKKGYRW++GNGF ++ S DPW+P++G+  P+ TH +++ F+V+ L+ G+G W+E  V+ SF+ S+A  IL  P+    K+DEIIW 
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD

Query:  LDPKGTPILPKIKICGWRIYNDILPTLENL
        +D  G   +      G ++   +LP ++ L
Subjt:  LDPKGTPILPKIKICGWRIYNDILPTLENL

XP_023905045.1 uncharacterized protein LOC112016795 [Quercus suber]

4.1e-61

35.71

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MS FK P SLC+++      FWWG  E  NK+ W SW+++C  K  GGLGFRDL  FN ALL+KQ WR+  N  SL+ +VL+ RYF   +FL+A LG  P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNI--QGFTVSQLLTG-QGEWNESLVQTSFLESDAQAILNIPINPMIKEDEI
        SY WRSI+  +D+ K G+RW++G+G  +   +D W+PK  S   +++ PN   +  TVS+L+    GEWN  LV+  FL  DA  IL IP +     D +
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNI--QGFTVSQLLTG-QGEWNESLVQTSFLESDAQAILNIPINPMIKEDEI

Query:  IWDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECK
        IW   PKGT                                       I  K+K   WR   +ILPT  NL +RG+  +P C  C    E++ HLFW+C+
Subjt:  IWDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECK

Query:  MTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNEV
            +W      T      D      +DF++  W     + +    +   + I W +W +RN V
Subjt:  MTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNEV

XP_023920731.1 uncharacterized protein LOC112032201 [Quercus suber]

1.1e-61

37.74

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MS FK P SLC+D+  +  RFWWG  +  NK+ W SW+++C  K +GGLGFRDL  FN ALL+KQ WR+  N  SL+ +VL+ RYF   +FL+A LG  P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNI--QGFTVSQLL-TGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEI
        SY WRSIL  + + + GYRW++G+G  +   KD W+P+  S   +L+ P        VS L+    GEWNESL+   F   D   IL IP++     D I
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNI--QGFTVSQLL-TGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEI

Query:  IWDLDPKG--------------------------------------TPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECK
        IW   PKG                                        I  KIK+  WR   +ILPT  NL +R +  N  C  C    E+T HLFW+C 
Subjt:  IWDLDPKG--------------------------------------TPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECK

Query:  MTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNE
        + K +W      + DL F DRT    +DFM+  W    T+ +    I   +   W IW  RN+
Subjt:  MTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNE

XP_030508852.1 uncharacterized protein LOC115723496 [Cannabis sativa]

4.1e-61

33.43

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCF+ P +LC+ +  + ARFWWGS+  G  IHW++W  LC  K QGGLGFR+   FNQALL+KQ+WRI+   +SLL+ +LR RYF  GN+L A LG NP
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD
        S TWRS++WG++L  KG RWR+G+G  ++   D W+P   +  P           V+ L+T    W+   ++T+F ++D   +L+IP++P   +D +IW+
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD

Query:  LDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW
            G                                     + PK++I  W++++  LP    L  R +  +P C  C    E+  H  + C   K +W
Subjt:  LDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW

Query:  IEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNEVY
         E    + D   ++R++ A    + +T        +    +   LV+CW IW  RN +Y
Subjt:  IEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNEVY

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAR4 uncharacterized protein LOC111018954

1.0e-62

41.83

Show/hide

Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCF+ PK L  + + I ARFWWGSS+   KIHW +W  L + K +GG+GFRDL +FN+ALL+KQ WRI+ + +S+L++VL+GRYFK  +F+ A +  NP
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFT-VSQLLT-GQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEII
        SY WRSILWGRDL KKG RWRIGNG  V    D W+P + + + IL+ P +   + VS L+   +G W   +V+  F   +A+ IL+IPI    +ED +I
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFT-VSQLLT-GQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEII

Query:  WDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKM
        W+ +  G                                        I  KIK+  WR+  D LPT  NL+ RG++    CYFC    E + HLFW CK 
Subjt:  WDLDPKGT--------------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKM

Query:  TKGLWI
         + LWI
Subjt:  TKGLWI

A0A6J1DRA0 uncharacterized protein LOC111022423

7.7e-74

53.48

Show/hide

Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        +SCFK P S+CN+L+ I  RFWWGSS    KIHW+SWK LC+ K+ GG+GFRD++IFNQA+L+KQSWRI+ + DSLL K LRG+YFKTG+FL A LG  P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD
        SY WRSILWGRDLFKKGYRW++GNGF ++ S DPW+P++G+  P+ TH +++ F+V+ L+ G+G W+E  V+ SF+ S+A  IL  P+    K+DEIIW 
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD

Query:  LDPKGTPILPKIKICGWRIYNDILPTLENL
        +D  G   +      G ++   +LP ++ L
Subjt:  LDPKGTPILPKIKICGWRIYNDILPTLENL

A0A803PV88 Uncharacterized protein

8.9e-62

35.2

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCF+ P S C  +  + A+FWWGS   G++IHW+SW+ LC  K  GGLGFR L   NQA+L+KQ+WR++ N  SLL  VL+ +YF   +FL A LGH+P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIP-KEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIW
        SYTW S+LWGRDL K G  W+IGNG  V   +DPWIP  +  C+     P ++  TV   +  QG WN   +   F      +IL +PI  + ++D ++W
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIP-KEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIW

Query:  DLDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGL
          DP G                                     + PK+K   WR+Y+ ILP   NL  R     P C FC+   E+  H   +C     +
Subjt:  DLDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGL

Query:  WIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNE
        W          ++L       K+FM N +      +++  ++   L I W IW  RN+
Subjt:  WIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNE

A0A803QEG9 Uncharacterized protein

5.2e-62

35.93

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCF+ P   CN L  + A FWWG +ENG+KIHWRSW  LC  K +GG+GFR    FNQALL+KQ+WRI+   +SLL+ +L+ +YF   +FL A +GH+P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIW-
        S TW+ I WGR+L   G RW+IG G  V +  DPW+P   S +PI T+       V+ L+T + +WN  L+Q  F   D + IL +P++     D++IW 
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIW-

Query:  ----------------------DLDPKGT------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW
                              DL    T             I  K+KI  WR+ +D LP   +L  R + T+  C  C+   EST H  + CK  K +W
Subjt:  ----------------------DLDPKGT------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW

Query:  IEFYPDTGDLYFLDRTNWAPKDFMEN-TWKDKETRRIDPGNIGKCLVICWQIWQHRNEV
          F+            NW+    M+N  +    +   +   + +   I W IW  RN+V
Subjt:  IEFYPDTGDLYFLDRTNWAPKDFMEN-TWKDKETRRIDPGNIGKCLVICWQIWQHRNEV

A0A803QH07 Uncharacterized protein

1.8e-62

36.36

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        MSCFK  K  CN L  + A FWWG+++NG KIHW+ WK LC  K++GG+GFR    FNQALL+KQ+WRI    DSLL+++L+ RYF T +FL+A +GH+P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD
        SYTW+SI WGR+L  KG R+++GNG  +D SKDPWIP   S  P+ ++       VS L+    EWN +L+   F   D + IL+IP++    +D +IW 
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWD

Query:  LDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW
            G+                                    + PKI+I  W++   ILP    L  R +  +  C  C    ES  H  + C   K +W
Subjt:  LDPKGT-----------------------------------PILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLW

Query:  IE--FYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVIC--WQIWQHRNEVY
         E  F  D      +   ++        T +D E            L IC  W IW  RN V+
Subjt:  IE--FYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVIC--WQIWQHRNEVY

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

2.3e-22

27.16

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRY----FKTGNFLNAPL
        MS    P+S+ N L+ +   F WGS+    K H   W ++C  K +GGLG R     N+AL+SK  WR++   +SL T VL+ +Y     +   +L  P 
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRY----FKTGNFLNAPL

Query:  GHNPSYTWRSILWG-RDLFKKGYRWRIGNG----FLVD-----------------------ASKDPWIPKEG---SCIPILTHPNIQ---GFTVSQLLTG
        G + S TWRSI  G RD+   G  W  G+G    F  D                        +KD WIP  G   + I   T  N +      V  L+TG
Subjt:  GHNPSYTWRSILWG-RDLFKKGYRWRIGNG----FLVD-----------------------ASKDPWIPKEG---SCIPILTHPNIQ---GFTVSQLLTG

Query:  QGE---WNESLVQTSFLES--DAQAILNIPINPMIKEDEIIWDLDPKGTPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWE
          +   W  S      + S  +   +  +P   M      +W +      +  ++K   W + N  + T E  + R L  + +C  C+G  ES  H+  +
Subjt:  QGE---WNESLVQTSFLES--DAQAILNIPINPMIKEDEIIWDLDPKGTPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWE

Query:  CKMTKGLWIEFYPDTGDLYFLDRT
        C    G+W+   P      F  ++
Subjt:  CKMTKGLWIEFYPDTGDLYFLDRT

P93295 Uncharacterized mitochondrial protein AtMg00310

4.1e-32

46.58

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHK-NQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHN
        MSCF+  K LC  L      FWW S EN  KI W +W++LC  K + GGLGFRDL  FNQALL+KQS+RII    +LL+++LR RYF   + +   +G  
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHK-NQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHN

Query:  PSYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPI
        PSY WRSI+ GR+L  +G    IG+G       D WI  E    P+
Subjt:  PSYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPI

Arabidopsis top hits

e value

%identity

Alignment

AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

1.1e-11

22.54

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPL--GH
        MS F+ P +   +++ IC+ F W   E   K    +W  +C  K++GGLG R L   N+      S    L    +  K+L+ R   +G F+   +  G 
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPL--GH

Query:  NPSY---TWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWI----PKEGSCIPILTHPNI------QGFTVSQLLTGQGEWNESLVQTSFLESDAQAILN
        N S+    W  I  GR +   G+R  I  G  + AS    +    P+      +L   ++      QG T  +  T + + N  + +  F   +  A   
Subjt:  NPSY---TWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWI----PKEGSCIPILTHPNI------QGFTVSQLLTGQGEWNESLVQTSFLESDAQAILN

Query:  IPINPMIKEDEIIWDLDPKGTPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLWIEFYPDTGDLYFLDRTNWAP
         P      + ++ W      +   PK  +  W    + L T + + +     +  C  C    E+  HLF+ C           P + ++ FL  T +  
Subjt:  IPINPMIKEDEIIWDLDPKGTPILPKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLWIEFYPDTGDLYFLDRTNWAP

Query:  KDFMENTWKDKETRR
        +  + + WK++  RR
Subjt:  KDFMENTWKDKETRR

AT4G29090.1 Ribonuclease H-like superfamily protein

1.0e-38

25.54

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP
        M+CF  PK++C  +  + A FWW + +    +HW++W  L  +K +GG+GF+D+  FN ALL KQ WR++   +SL+ KV + RYF   + LNAPLG  P
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSC-------IPILTHPNIQG-FTVSQLLTGQG-EWNESLVQTSFLESDAQAILNIPINPM
        S+ W+SI   +++ ++G R  +GNG  +   +  W+  + +        +P   + ++     VS L+   G EW + +++  F E + + I  +     
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSC-------IPILTHPNIQG-FTVSQLLTGQG-EWNESLVQTSFLESDAQAILNIPINPM

Query:  IKEDEIIWDL-----------------------------DPKGTPIL---------PKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCH
           D   WD                              +P   PI          PKI+   W+  ++ LP    L  R L     C  C    E+  H
Subjt:  IKEDEIIWDL-----------------------------DPKGTPIL---------PKIKICGWRIYNDILPTLENLNNRGLDTNPLCYFCRGKTESTCH

Query:  LFWECKMTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLV--ICWQIWQHRNEV
        L ++C   +  W         +       WA   ++   W                LV  + W++W++RNE+
Subjt:  LFWECKMTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLV--ICWQIWQHRNEV

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

2.9e-33

46.58

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Query:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHK-NQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHN
        MSCF+  K LC  L      FWW S EN  KI W +W++LC  K + GGLGFRDL  FNQALL+KQS+RII    +LL+++LR RYF   + +   +G  
Subjt:  MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHK-NQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHN

Query:  PSYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPI
        PSY WRSI+ GR+L  +G    IG+G       D WI  E    P+
Subjt:  PSYTWRSILWGRDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPI

Sequences

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CDS sequence

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ATGTCTTGTTTTAAATTTCCTAAGTCTCTTTGTAATGATTTGAATGTGATTTGTGCTAGGTTCTGGTGGGGGAGTTCGGAGAATGGAAATAAAATTCATTGGCGAAGCTG
GAAGAGGTTATGTGTGCATAAAAATCAGGGTGGTTTGGGCTTCAGGGATCTGAACATTTTCAATCAAGCCTTGCTATCAAAGCAAAGCTGGCGAATTATTCTCAATCTAG
ATAGCCTATTGACAAAGGTGTTACGGGGAAGATATTTTAAAACTGGAAACTTTCTAAATGCCCCGTTAGGACATAACCCTTCCTATACGTGGAGGAGTATACTCTGGGGT
CGGGACCTATTCAAAAAGGGCTACCGATGGAGAATAGGGAATGGGTTCCTAGTGGATGCTAGCAAGGATCCTTGGATCCCAAAAGAAGGCTCCTGTATCCCCATTCTAAC
ACATCCTAACATACAAGGCTTCACAGTGTCACAACTTCTCACTGGTCAGGGCGAATGGAATGAATCCTTAGTTCAAACATCCTTCTTGGAGTCAGATGCACAAGCAATAT
TGAATATACCGATAAACCCTATGATCAAGGAGGATGAAATTATTTGGGATCTTGACCCAAAAGGAACGCCAATTCTGCCTAAAATCAAAATATGTGGCTGGAGAATATAC
AATGATATACTCCCCACCTTAGAAAATTTGAACAATAGAGGATTGGATACTAACCCGCTTTGTTATTTCTGCAGGGGAAAAACAGAATCCACATGCCATCTATTTTGGGA
ATGTAAAATGACCAAAGGTCTGTGGATAGAATTTTATCCTGATACTGGTGACCTCTATTTTCTGGACAGGACCAATTGGGCACCTAAAGATTTTATGGAAAACACATGGA
AGGACAAAGAAACGAGAAGAATCGATCCAGGAAACATTGGTAAATGTTTGGTGATTTGCTGGCAGATTTGGCAGCACAGAAACGAGGTTTATTAA

mRNA sequence

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Protein sequence

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MSCFKFPKSLCNDLNVICARFWWGSSENGNKIHWRSWKRLCVHKNQGGLGFRDLNIFNQALLSKQSWRIILNLDSLLTKVLRGRYFKTGNFLNAPLGHNPSYTWRSILWG
RDLFKKGYRWRIGNGFLVDASKDPWIPKEGSCIPILTHPNIQGFTVSQLLTGQGEWNESLVQTSFLESDAQAILNIPINPMIKEDEIIWDLDPKGTPILPKIKICGWRIY
NDILPTLENLNNRGLDTNPLCYFCRGKTESTCHLFWECKMTKGLWIEFYPDTGDLYFLDRTNWAPKDFMENTWKDKETRRIDPGNIGKCLVICWQIWQHRNEVY

Lcy06g018630 (gene) of Sponge gourd (P93075) v1 genome