CuGenDBv2

Gene ID	Lcy06g019310
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ribonuclease H-like superfamily protein
Genome location	Chr06:43917734..43919681
RNA-Seq Expression	Lcy06g019310
Synteny	Lcy06g019310
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domains	IPR002156 - Ribonuclease H domain IPR012337 - Ribonuclease H-like superfamily IPR036397 - Ribonuclease H superfamily IPR044730 - Ribonuclease H-like domain, plant type

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAM01179.2 Putative retroelement [Oryza sativa Japonica Group]

3.1e-86

33.22

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG P+  GR     F+ L++R+W+ +  W EK  S GGKEILIK++ QA+P Y M  F+LP S+CE++ +   NFWWG+ KG R+ HW  W  L   K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
        +GGMGFR+ +LFNQA+LA+ +WR+L  P SL AR+LK  Y+  G  ++   G N S  WR+I +G EL ++G  W+IG G  +R+ +D WI R  S  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST
            + + ++VS ++  +GSW  D I   F   D E I N         D I W+ +  G FSV+SAYHLA+ + +  + S+S      + W        
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST

Query:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK
         ++LW C   +++     PL N+    N +    +D    + E  Q ED    +++LW +W+ RN I+H    P   V  R +E+               
Subjt:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK

Query:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS
         E+  ++      +L  +K        +W  P PGS  LNVD S  +S   GG+  + R+ +G  I      ++   S    E+ A  +G+       A 
Subjt:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS

Query:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA
             + PIV+ ++ + +I+L   +    SE++FL+ EI+ ++      SF  C RSQN  +H LA
Subjt:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA

ABB46931.2 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]

3.1e-86

33.22

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG P+  GR     F+ L++R+W+ +  W EK  S GGKEILIK++ QA+P Y M  F+LP S+CE++ +   NFWWG+ KG R+ HW  W  L   K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
        +GGMGFR+ +LFNQA+LA+ +WR+L  P SL AR+LK  Y+  G  ++   G N S  WR+I +G EL ++G  W+IG G  +R+ +D WI R  S  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST
            + + ++VS ++  +GSW  D I   F   D E I N         D I W+ +  G FSV+SAYHLA+ + +  + S+S      + W        
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST

Query:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK
         ++LW C   +++     PL N+    N +    +D    + E  Q ED    +++LW +W+ RN I+H    P   V  R +E+               
Subjt:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK

Query:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS
         E+  ++      +L  +K        +W  P PGS  LNVD S  +S   GG+  + R+ +G  I      ++   S    E+ A  +G+       A 
Subjt:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS

Query:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA
             + PIV+ ++ + +I+L   +    SE++FL+ EI+ ++      SF  C RSQN  +H LA
Subjt:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]

2.3e-86

31.51

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+P   GRNK   F+++K ++   +  W  KLFSAGGKEILIK++AQA+P Y MS F+LP  +CEDI +  A FWWG+ K K   HW RW  +  +K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
        RGG+GFR+L  FNQA++AK  WR++++P+SL+ARV+K RY+K   F  A +GSNPS  WRSI+WG ++ ++G RW+IG G  + + KD WI R  +  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAI--FIQNNHQASTSKKE------------
                  V+ ++ S   W+ D ++  F   D E I   +      +D+++W+++  G +SVKS Y LA+     N  ++S S               
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAI--FIQNNHQASTSKKE------------

Query:  ---------------DPVQLWKRKS------------EESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWE
                           LWKR+S             E+  H L  CK A++IW+   PL+      +   +++     W   +  E +L   I+  W 
Subjt:  ---------------DPVQLWKRKS------------EESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWE

Query:  LWNLRNNIIHNATTPNQ-------EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSIC
        +W+ RN  I      +        + +++A +      N +   D G++         Q +W PP      LNVDA+ S   +  G+  I RD+ G  + 
Subjt:  LWNLRNNIIHNATTPNQ-------EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSIC

Query:  EGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLAR
         G ++      + + E  AI  G++    I +S        ++V S+   V+ LLN +    +EI ++++++ R   E +   F   PR+ N  AH LA+
Subjt:  EGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLAR

Query:  HAV
         A+
Subjt:  HAV

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]

2.1e-87

33.78

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+P+   RN+ + F  +KDR+W+ LQGWK KLFS GGKE+LIK++AQAIP YTMSCFRLP  +  + +   A FWWGSSK  +K HW+ W+ L + K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGS-NVP
         GGMGFR+L+LFN+A+LAK  WRIL  P+S+L+RVLKGRYFK   F+EA +  NPS  WRSI+WGR+L ++G RW+IG G+ + I  D+W+  + +  + 
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGS-NVP

Query:  MWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLW-------
              L  +  S +    G W+ D+++D F+  + + I +   G    +D +IWNYE  G++SV+S Y +A+      QA +S   + V+ W       
Subjt:  MWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLW-------

Query:  -------------------------KR------------KSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAIL
                                 KR            ++ E +IH  W CK A+ +W      +N  FG  + S + I      +E+L + D E   +
Subjt:  -------------------------KR------------KSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAIL

Query:  ILWELWNLRNNIIHNATTPNQ-EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEG
        ++W LWN RN    N +T    ++ +  VE        +  + S     R+ T  ++  W PP  G + +N DAS   S +  G+  I  +  G  +   
Subjt:  ILWELWNLRNNIIHNATTPNQ-EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEG

Query:  YRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHA
         + +    S+ M E  A +EG++                   L++ IG    ++ +  DLSE   +V + +    +    SF    R  N+ AHMLAR A
Subjt:  YRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHA

Query:  V
        +
Subjt:  V

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]

3.9e-89

33.39

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+PS  GR     F ++K R+   +  W+ K F++GGKE+LIK++AQAIPTY MS F++P  +CEDI +A A FWWG+ + ++  HW RW ++  SK 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
        RGGMGFR+L  FNQA++AK  WRI++FPSSL+ARVLK RYFK   F+ A LGS PS  WRSI+WGR++  +G RW+IG G ++ +  ++WI R  +  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPV-----------
                  V+ ++     W+ DLI   F   D E I          +D +IW+Y+  G +SVKS Y +A+ I+     S S  +  +           
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPV-----------

Query:  ------------------QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNR-NSWYAIDYWAWINENLQEEDLETAILILW
                           LWK+K              E+  H+L  C  A++IW  +  L   L G+ R +  + + +W    ++ + E  E A L LW
Subjt:  ------------------QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNR-NSWYAIDYWAWINENLQEEDLETAILILW

Query:  ELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSDSGMELPRL--KTQLS---QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICE
         +W  RN  +      N   ++   E       A + S   +  P +  KT+ +   Q +WSPPP G   +NVDA+     ++ G+  + RDS G+    
Subjt:  ELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSDSGMELPRL--KTQLS---QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICE

Query:  GYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARH
          + +    S+ M E  A+  G++      A ++++     +  S+++ VI+L+NK  S L+EI +L+++I+  +   ++F   H PR  N  AH LA+ 
Subjt:  GYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARH

Query:  AV
        A+
Subjt:  AV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DAR4 uncharacterized protein LOC111018954

1.0e-87

33.78

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+P+   RN+ + F  +KDR+W+ LQGWK KLFS GGKE+LIK++AQAIP YTMSCFRLP  +  + +   A FWWGSSK  +K HW+ W+ L + K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGS-NVP
         GGMGFR+L+LFN+A+LAK  WRIL  P+S+L+RVLKGRYFK   F+EA +  NPS  WRSI+WGR+L ++G RW+IG G+ + I  D+W+  + +  + 
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGS-NVP

Query:  MWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLW-------
              L  +  S +    G W+ D+++D F+  + + I +   G    +D +IWNYE  G++SV+S Y +A+      QA +S   + V+ W       
Subjt:  MWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLW-------

Query:  -------------------------KR------------KSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAIL
                                 KR            ++ E +IH  W CK A+ +W      +N  FG  + S + I      +E+L + D E   +
Subjt:  -------------------------KR------------KSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAIL

Query:  ILWELWNLRNNIIHNATTPNQ-EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEG
        ++W LWN RN    N +T    ++ +  VE        +  + S     R+ T  ++  W PP  G + +N DAS   S +  G+  I  +  G  +   
Subjt:  ILWELWNLRNNIIHNATTPNQ-EVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEG

Query:  YRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHA
         + +    S+ M E  A +EG++                   L++ IG    ++ +  DLSE   +V + +    +    SF    R  N+ AHMLAR A
Subjt:  YRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHA

Query:  V
        +
Subjt:  V

A0A803QC75 Uncharacterized protein

2.7e-88

33.06

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+PS +GR+K  +F  +K+RIW+ +  W EK+FSAGGKEIL+K++ Q+IPTY MSCFRLP   C+ +    ANFWWG ++   + HW  W+ LC SK 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
         GGMGFR    FNQA+LAK +WRI + P SLL R+LK RYF    FLEA LG +PSLTW+ I W REL  +G RWK+G G HI+   D WI    + +P 
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKED-------------
               G  VS ++     W   L++  FS  D E I +      + +D +IW++  +G+++VKS YHLA  +    Q+S+S ++              
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKED-------------

Query:  --------------PV--QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRN-SWYAIDYWAWINENLQEEDLETAILILW
                      PV   L KRK            + ES  H+L++CK AK +W H     N++F    + + Y  DY   ++    + ++E     LW
Subjt:  --------------PV--QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRN-SWYAIDYWAWINENLQEEDLETAILILW

Query:  ELWNLRNNIIH-NATTPNQEVIIRAVETKKSERNAY----------LGSDSGMEL------------PRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLK
         +W  RN I+H +   P +++   AV    + RNA             S    E+            P+ +   +  +W PP   S+ LNVDA+     K
Subjt:  ELWNLRNNIIH-NATTPNQEVIIRAVETKKSERNAY----------LGSDSGMEL------------PRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLK

Query:  LGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFS
        + G+  I RDS+G+ +    ++  G++S   +E  A+ + +  +           +P  +V S+A+ V+N L    + +S    L+ ++  +++ +   +
Subjt:  LGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFS

Query:  FVHCPRSQNEEAHMLARHAV
          H  R  N  AH LA+ A+
Subjt:  FVHCPRSQNEEAHMLARHAV

A0A803QEG9 Uncharacterized protein

9.3e-89

32.85

Show/hide

Query:  MEVSKELGYYLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMR
        M +S+    YLG+PS +GR+K  +F  +K+RIW+ +Q W EKLFSAGG+E+L+K++ Q+IPTY MSCFRLP   C  +    ANFWWG ++   K HW  
Subjt:  MEVSKELGYYLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMR

Query:  WSKLCISKDRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI
        W+ LC +K  GGMGFR    FNQA+LAK +WRI+++P+SLL+ +LK +YF    FLEA +G +PSLTW+ I WGREL   G RWKIG+G  +R   D W+
Subjt:  WSKLCISKDRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI

Query:  ARKGSNVPMWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQL
            S +P+       G  V+ ++     W   L+Q  F   D E I          +D +IW++  +G F+V+SAYHLA  ++N   +S+S     VQ 
Subjt:  ARKGSNVPMWIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQL

Query:  WK-------------------------------------------RKSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEE
        WK                                           +++ EST H+L+ CK AK +W  F    N    ++  +    DY  +++    + 
Subjt:  WK-------------------------------------------RKSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEE

Query:  DLETAILILWELWNLRNNIIH--NATTPNQEVIIR---------------AVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRS
        ++E    I+W +W  RN ++H  NA   N   +                 A  T  +  +    S    + P     LS   W PP    + LN DA+  
Subjt:  DLETAILILWELWNLRNNIIH--NATTPNQEVIIR---------------AVETKKSERNAYLGSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRS

Query:  DSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEV
        +S    GV  + RD+SGS        I GN+    +E +A+   +       A +  L I  I   ++A+ V+N L    +  SE S L++++  +++  
Subjt:  DSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEV

Query:  ESFSFVHCPRSQNEEAHMLARHAV
         + S  H  R+ N  AH LA+ A+
Subjt:  ESFSFVHCPRSQNEEAHMLARHAV

A0A803QH07 Uncharacterized protein

4.2e-89

34.97

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG+PS +GR+K  +F  +K+++W+ L  W EK+FS GGKE+L+K++ Q+IPTY MSCF+L    C  +    ANFWWG+++   K HW RW  LC SK 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
         GGMGFR    FNQA+LAK +WRI   P SLL+R+LK RYF    FL+A +G +PS TW+SI WGREL  +G R+K+G G+HI   KD WI    S  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGK---YVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKED----------
            S  G     VS ++  N  W + L+ D F   D E I +        QD +IW++  +G ++VKS +HLA  +++  Q+S+S              
Subjt:  WIDESLKGK---YVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKED----------

Query:  -----------------PV--QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNR-NSWYAIDYWAWINENLQEEDLETAIL
                         PV   L+KRK            S ES  H+L+ C  AK IW         +   N+  S +  DY  +++    +ED E  I 
Subjt:  -----------------PV--QLWKRK------------SEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNR-NSWYAIDYWAWINENLQEEDLETAIL

Query:  ILWELWNLRNNIIHNATTPNQEVIIRAVE--TKKSERNAYLGSDSGMELPRL---------KTQLSQGRWSPPPPGSWMLNVD-ASRSDSLKLGGVSWIW
        +LW +W  RN + H         II       +   R  +L S S      L         +T      W+PP    + LNVD AS SD  KL G+  I 
Subjt:  ILWELWNLRNNIIHNATTPNQEVIIRAVE--TKKSERNAYLGSDSGMELPRL---------KTQLSQGRWSPPPPGSWMLNVD-ASRSDSLKLGGVSWIW

Query:  RDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQ
        R   G  +    + + G++    +E +A+   +  +     S+S L I  I   ++A+ V   LN + SDLS  S L+ +I  +++   S    H  RS 
Subjt:  RDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQ

Query:  NEEAHMLARHAV
        N+ AH LAR A+
Subjt:  NEEAHMLARHAV

Q8S5K1 Putative retroelement

1.5e-86

33.22

Show/hide

Query:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD
        YLG P+  GR     F+ L++R+W+ +  W EK  S GGKEILIK++ QA+P Y M  F+LP S+CE++ +   NFWWG+ KG R+ HW  W  L   K 
Subjt:  YLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKD

Query:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM
        +GGMGFR+ +LFNQA+LA+ +WR+L  P SL AR+LK  Y+  G  ++   G N S  WR+I +G EL ++G  W+IG G  +R+ +D WI R  S  P+
Subjt:  RGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPM

Query:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST
            + + ++VS ++  +GSW  D I   F   D E I N         D I W+ +  G FSV+SAYHLA+ + +  + S+S      + W        
Subjt:  WIDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEEST

Query:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK
         ++LW C   +++     PL N+    N +    +D    + E  Q ED    +++LW +W+ RN I+H    P   V  R +E+               
Subjt:  IHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVET-------------KK

Query:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS
         E+  ++      +L  +K        +W  P PGS  LNVD S  +S   GG+  + R+ +G  I      ++   S    E+ A  +G+       A 
Subjt:  SERNAYLGSDSGMELPRLKTQLS--QGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRAS

Query:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA
             + PIV+ ++ + +I+L   +    SE++FL+ EI+ ++      SF  C RSQN  +H LA
Subjt:  RSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLA

SwissProt top hits

e value

%identity

Alignment

P0C2F6 Putative ribonuclease H protein At1g65750

1.0e-36

24.51

Show/hide

Query:  MPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKDRGG
        MP    R     F ++ +R+   + GW+EK  S  G+  L K++  ++P ++MS   LP SI   +++    F WGS+  K+K H ++WSK+C  K  GG
Subjt:  MPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKDRGG

Query:  MGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE---APLGSNPSLTWRSIIWG-RELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVP
        +G R  K  N+A+++K+ WR+L+  +SL   VL+ +Y  G         P GS  S TWRSI  G R++   G  W  G G  IR   D W++ K     
Subjt:  MGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE---APLGSNPSLTWRSIIWG-RELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVP

Query:  MWIDESLKGKYVSTILKSN-----GSWKNDLIQDLFSIPDQEDIKNTVAG-GDNFQDDIIWNYEDNGIFSVKSAYHLA----------------------
        + +D   +     T++  +       W    I    +   + +++  V       +D + W +  +G FSV+SAY +                       
Subjt:  MWIDESLKGKYVSTILKSN-----GSWKNDLIQDLFSIPDQEDIKNTVAG-GDNFQDDIIWNYEDNGIFSVKSAYHLA----------------------

Query:  -------IFIQNNHQASTSKKEDPVQLWK-------RKSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQE----EDLETA
               +++  N    T ++     L         +   ES +H L +C     IW   +P         +  +++   + W+ +NL +    ED+  +
Subjt:  -------IFIQNNHQASTSKKEDPVQLWK-------RKSEESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQE----EDLETA

Query:  IL---ILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSD-SGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGS
         +   I+W  W  R   I    T  ++ +    E       A+ G+   G+  PR++  +    W  P  G   +N D +   +  L     + RD +G 
Subjt:  IL---ILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSD-SGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGS

Query:  SICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHM
        + C G+    G  S    E+  +  G+      +  R  L +   V       ++  L    SD   +SFLV      + +      VH  R  N  A  
Subjt:  SICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHM

Query:  LARHAVFGLSGGFGSF
        LA +A F LS GF SF
Subjt:  LARHAVFGLSGGFGSF

P93295 Uncharacterized mitochondrial protein AtMg00310

8.8e-36

50.35

Show/hide

Query:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISK-DRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE
        A+P Y MSCFRL   +C+ +  A   FWW S + KRK  W+ W KLC SK D GG+GFR+L  FNQA+LAK S+RI+  P +LL+R+L+ RYF     +E
Subjt:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISK-DRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE

Query:  APLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI
          +G+ PS  WRSII GREL  RG    IG G H ++  D WI
Subjt:  APLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI

Arabidopsis top hits

e value

%identity

Alignment

AT3G09510.1 Ribonuclease H-like superfamily protein

2.7e-16

23.11

Show/hide

Query:  LKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPMWIDESLKGKYVSTILKSNGS---WKNDLIQDLFSI
        +K RYFK    L+A +    S  W S++ G  L ++G R  IG G +IRI  D+ I       P+  +E+ K   ++ + +  GS   W +  I      
Subjt:  LKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPMWIDESLKGKYVSTILKSNGS---WKNDLIQDLFSI

Query:  PDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQ-----------------LWKRKSE------------------
         D   I           D IIWNY   G ++V+S Y L     + +  + +     +                  LW+  S+                  
Subjt:  PDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQ-----------------LWKRKSE------------------

Query:  --------ESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENL---QEEDLE-----TAILILWELWNLRNNIIHNATTPNQEVIIR
                ES  H+L+ C  A   W     L +    L RN   + D+   I+  L   Q+  +        + ++W +W  RNN++ N     +E   +
Subjt:  --------ESTIHSLWNCKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENL---QEEDLE-----TAILILWELWNLRNNIIHNATTPNQEVIIR

Query:  AVETKKSERNAYL-GSDSGMELPRLKTQLSQGR--WSPPPPGSWMLNVDASRSDSLKLGGV-SWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMR
         V + K+E + +L  + S  + P    Q+++ +  W  PP      N DA   D  KL     WI R+  G+ I  G  ++    +    E +A+L  ++
Subjt:  AVETKKSERNAYL-GSDSGMELPRLKTQLSQGR--WSPPPPGSWMLNVDASRSDSLKLGGV-SWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMR

Query:  SLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARH
            IR      +      L N I  I+  +   + L +ISF   +   +      F F+   R  N+ AH+LA++
Subjt:  SLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARH

AT4G29090.1 Ribonuclease H-like superfamily protein

2.1e-56

27.81

Show/hide

Query:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKDRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEA
        A+PTYTM+CF LP ++C+ I    A+FWW + +  +  HW  W  L   K  GG+GF++++ FN A+L K  WR+L  P SL+A+V K RYF     L A
Subjt:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISKDRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEA

Query:  PLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPMWIDESLKGKY--VSTILK-------SNGSWKNDLIQDLFSIPDQEDIKN
        PLGS PS  W+SI   +E+ ++G R  +G G  I I +  W+  K ++  + +      +Y  VS+ILK       S   W+ D+I+ LF   +++ I  
Subjt:  PLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPMWIDESLKGKY--VSTILK-------SNGSWKNDLIQDLFSIPDQEDIKN

Query:  TVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKE---DPV--QLWKRKSEESTIHSLW-------------------------NCKLA
           GG    D   W+Y  +G ++VKS Y +   I N   +     E   +P+  ++WK ++     H LW                          C   
Subjt:  TVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKE---DPV--QLWKRKSEESTIHSLW-------------------------NCKLA

Query:  KRIWNHFI-------------PLMNVLFGLNRNSWYAIDYWAWI--NENLQEEDLETAI-LILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYL
        K   NH +              +   L G   +S Y   YW +   N N Q E     +  +LW LW  RN ++      N + ++R  E    E     
Subjt:  KRIWNHFI-------------PLMNVLFGLNRNSWYAIDYWAWI--NENLQEEDLETAI-LILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYL

Query:  GSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPI
         ++S    P++  + S GRW PPP      N DA+ +   +  G+ W+ R+  G     G R +    S+   E+ A+   + SL       S      +
Subjt:  GSDSGMELPRLKTQLSQGRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPI

Query:  VVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHAV
        +  S++  +I +LN +D     +   + +++R++++     FV  PR  N  A  +AR ++
Subjt:  VVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHAV

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein

6.3e-05

20.69

Show/hide

Query:  ILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGR---WSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSIC
        ++W +W   N+++ N T    +     VE   ++   +L +    E           R   WSPP       N DAS  +   + G+ WI R+S G+ I 
Subjt:  ILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQGR---WSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSIC

Query:  EGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLAR
         G  +  G  + +  E   ++  +++       +        V+       I  +  + S    +   +  I+  +   ES  F    R QN  A  LA+
Subjt:  EGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSEISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLAR

Query:  HAV
         A+
Subjt:  HAV

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein

6.3e-37

50.35

Show/hide

Query:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISK-DRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE
        A+P Y MSCFRL   +C+ +  A   FWW S + KRK  W+ W KLC SK D GG+GFR+L  FNQA+LAK S+RI+  P +LL+R+L+ RYF     +E
Subjt:  AIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLCISK-DRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLE

Query:  APLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI
          +G+ PS  WRSII GREL  RG    IG G H ++  D WI
Subjt:  APLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAAGTGTCAAAAGAGTTGGGATACTACTTGGGCATGCCTTCTCAAAACGGGAGGAACAAGAATGTAGTGTTTAGGAAGCTAAAGGACAGAATTTGGCGGACC
TTGCAAGGTTGGAAGGAAAAGCTGTTTTCAGCCGGAGGCAAGGAAATCCTCATTAAGTCTATAGCGCAGGCCATTCCCACCTATACAATGAGTTGCTTTAGACTC
CCTAATTCCATTTGCGAGGATATTAACAGAGCTTGTGCTAACTTCTGGTGGGGATCGTCGAAGGGTAAAAGAAAAGCTCACTGGATGCGGTGGTCCAAATTGTGT
ATTAGTAAAGATAGAGGAGGCATGGGTTTCAGAGAATTAAAGTTATTTAATCAGGCCATGTTGGCTAAGATGAGCTGGAGAATCCTGAAATTTCCTAGCTCTTTG
CTTGCTAGAGTCCTCAAGGGGAGGTACTTCAAAGGAGGCTTTTTTCTCGAAGCTCCTTTAGGTTCAAACCCCTCTCTAACGTGGAGGAGCATCATATGGGGCCGA
GAGCTTTTCCAAAGAGGCTATAGATGGAAGATTGGTAAAGGAAATCACATAAGGATTGATAAAGACTCTTGGATTGCGAGGAAAGGCTCGAATGTTCCAATGTGG
ATTGACGAGTCTTTGAAAGGGAAGTATGTCTCTACCATCCTCAAAAGCAATGGCAGTTGGAAGAATGACTTAATTCAAGATTTATTTAGCATCCCCGACCAGGAA
GACATAAAGAACACCGTGGCTGGAGGAGATAATTTCCAAGATGATATTATTTGGAACTATGAGGATAATGGCATTTTTTCTGTCAAAAGTGCCTACCACTTGGCC
ATTTTTATCCAAAACAATCATCAAGCTTCTACATCAAAAAAGGAGGACCCGGTTCAGTTGTGGAAAAGGAAATCCGAGGAATCAACAATCCACTCTCTCTGGAAT
TGTAAGTTGGCAAAGAGAATTTGGAATCACTTCATCCCTCTAATGAATGTGCTTTTCGGTTTAAACAGGAATTCTTGGTATGCAATCGATTATTGGGCCTGGATA
AACGAGAATCTACAAGAGGAAGATCTAGAGACCGCTATCCTGATCTTGTGGGAACTATGGAATCTCAGGAACAACATTATTCACAACGCAACAACTCCAAATCAG
GAGGTCATCATCAGAGCAGTGGAAACAAAAAAATCGGAAAGGAATGCTTACCTCGGTTCAGATTCTGGCATGGAGCTCCCAAGATTGAAGACCCAGTTGAGTCAA
GGCCGCTGGTCTCCTCCTCCTCCCGGTTCGTGGATGCTTAATGTGGACGCCTCTCGCAGCGATTCTCTCAAGTTAGGAGGGGTGAGTTGGATTTGGCGTGACTCC
TCAGGTTCTTCTATCTGTGAGGGGTATAGACGAATTAATGGGAATTGGTCCATTAAGATGCTGGAGATGAGAGCGATTCTTGAAGGTATGCGTAGCTTACCGACC
ATCCGGGCTTCGCGCTCAAATCTGGTGATTCCGCCGATTGTAGTGTTGTCTAATGCCATTGGCGTGATTAACCTGCTGAATAAATCAGATTCAGACCTTTCGGAG
ATCTCTTTTCTGGTCGCCGAGATAGAACGAATGGTTGCAGAGGTCGAGAGTTTCTCCTTCGTCCATTGCCCGCGTTCTCAGAATGAAGAAGCTCATATGCTTGCG
CGCCATGCCGTTTTCGGTTTATCGGGGGGTTTTGGTAGCTTTTTGGAGACCTCTTCCAATTCGGAAGAGGGTTTAGTTTTGTTGGGCCGGATTGGGCCCGAGAAT
TTGTTCCCCCACTCTAGTGGGACTGGTGTTTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEVSKELGYYLGMPSQNGRNKNVVFRKLKDRIWRTLQGWKEKLFSAGGKEILIKSIAQAIPTYTMSCFRLPNSICEDINRACANFWWGSSKGKRKAHWMRWSKLC
ISKDRGGMGFRELKLFNQAMLAKMSWRILKFPSSLLARVLKGRYFKGGFFLEAPLGSNPSLTWRSIIWGRELFQRGYRWKIGKGNHIRIDKDSWIARKGSNVPMW
IDESLKGKYVSTILKSNGSWKNDLIQDLFSIPDQEDIKNTVAGGDNFQDDIIWNYEDNGIFSVKSAYHLAIFIQNNHQASTSKKEDPVQLWKRKSEESTIHSLWN
CKLAKRIWNHFIPLMNVLFGLNRNSWYAIDYWAWINENLQEEDLETAILILWELWNLRNNIIHNATTPNQEVIIRAVETKKSERNAYLGSDSGMELPRLKTQLSQ
GRWSPPPPGSWMLNVDASRSDSLKLGGVSWIWRDSSGSSICEGYRRINGNWSIKMLEMRAILEGMRSLPTIRASRSNLVIPPIVVLSNAIGVINLLNKSDSDLSE
ISFLVAEIERMVAEVESFSFVHCPRSQNEEAHMLARHAVFGLSGGFGSFLETSSNSEEGLVLLGRIGPENLFPHSSGTGV

Lcy06g019310 (gene) of Sponge gourd (P93075) v1 genome