; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g021670 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g021670
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPWWP domain-containing protein
Genome locationChr06:46665375..46665926
RNA-Seq ExpressionLcy06g021670
SyntenyLcy06g021670
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018304.1 putative oxidoreductase GLYR1, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-6575.56Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV
        ++ S+SEFIKDTYWTDRLIQGIAED++ FENQNE +E HVQ P+E VI T          GVNSTNQ+ PHE +EP+SE  VEDPYPTALILTFTD DS+
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV

Query:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        PSE NLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRT+DAETAFSSTGKYS+FGTAL+ YRLKFLPPAKV  R   R RK
Subjt:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

XP_008447578.1 PREDICTED: uncharacterized protein LOC103489995 [Cucumis melo]1.1e-6677.25Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI
        +EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETV+ HVQ  +E V+ +  E   A            G+NST++ EP E VEPESE  VEDPYPTALI
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI

Query:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFS+TGK S+FGTALVSYRLKFLPP KV  R TRR RK
Subjt:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

XP_022145593.1 uncharacterized protein LOC111015004 isoform X1 [Momordica charantia]3.3e-6877.09Show/hide
Query:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQD-GASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVP
        EASDSEFIKD+YWTDRLIQGIAED+ SF+NQNETVE  +Q P+E+V+  A E D G  CPGVNSTNQEP E VE ESE C+EDPYPTALILTFTD +SVP
Subjt:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQD-GASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVP

Query:  SETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        SETNLN+I RKYGPLYESKTEV+KKS+RAKVVFKRTSDAETAFS TGKYS+FG +LVSY LK+LPP KV S  T+RRR+
Subjt:  SETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

XP_022955740.1 uncharacterized protein LOC111457648 [Cucurbita moschata]4.5e-6575.56Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV
        ++ S+SEFIKDTYWTDRLIQGIAED++ FENQNE +E HVQ P+E VI T          GVNSTNQ+ PHE +EP+SE  VEDPYPTALILTFTD DS+
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV

Query:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        PSE NLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRT+DAETAFSSTGKYS+FGTAL+ YRLKFLPPAKV  R   R RK
Subjt:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

XP_023527478.1 uncharacterized protein LOC111790696 [Cucurbita pepo subsp. pepo]2.6e-6576.67Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQ-EPHERVEPESEKCVEDPYPTALILTFTDLDSV
        +E S+SEFIKDTYWTDRLIQGIAED++ FENQNE +E HVQ P+E VI T          GVNSTNQ EPHER+EP S   VEDPYPTALILTFTD DS+
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQ-EPHERVEPESEKCVEDPYPTALILTFTDLDSV

Query:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        PSE NLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRT+DAETAFSSTGKYS+FGTAL+ YRLKFLPPAKV  R   R RK
Subjt:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

TrEMBL top hitse value%identityAlignment
A0A1S3BID9 uncharacterized protein LOC1034899955.2e-6777.25Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI
        +EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETV+ HVQ  +E V+ +  E   A            G+NST++ EP E VEPESE  VEDPYPTALI
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI

Query:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFS+TGK S+FGTALVSYRLKFLPP KV  R TRR RK
Subjt:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

A0A5D3BXS2 PWWP domain-containing protein5.2e-6777.25Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI
        +EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETV+ HVQ  +E V+ +  E   A            G+NST++ EP E VEPESE  VEDPYPTALI
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASC---------PGVNSTNQ-EPHERVEPESEKCVEDPYPTALI

Query:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFS+TGK S+FGTALVSYRLKFLPP KV  R TRR RK
Subjt:  LTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

A0A6J1CWD7 uncharacterized protein LOC111015004 isoform X11.6e-6877.09Show/hide
Query:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQD-GASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVP
        EASDSEFIKD+YWTDRLIQGIAED+ SF+NQNETVE  +Q P+E+V+  A E D G  CPGVNSTNQEP E VE ESE C+EDPYPTALILTFTD +SVP
Subjt:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQD-GASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVP

Query:  SETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        SETNLN+I RKYGPLYESKTEV+KKS+RAKVVFKRTSDAETAFS TGKYS+FG +LVSY LK+LPP KV S  T+RRR+
Subjt:  SETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

A0A6J1GVX3 uncharacterized protein LOC1114576482.2e-6575.56Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV
        ++ S+SEFIKDTYWTDRLIQGIAED++ FENQNE +E HVQ P+E VI T          GVNSTNQ+ PHE +EP+SE  VEDPYPTALILTFTD DS+
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQE-PHERVEPESEKCVEDPYPTALILTFTDLDSV

Query:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        PSE NLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRT+DAETAFSSTGKYS+FGTAL+ YRLKFLPPAKV  R   R RK
Subjt:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

A0A6J1IWP1 uncharacterized protein LOC111479886 isoform X11.1e-6475.56Show/hide
Query:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQ-EPHERVEPESEKCVEDPYPTALILTFTDLDSV
        ++ S+SEFIKDTYWTDRLIQGIA+D++ FENQNE +E H Q P+E VI T          GVNSTNQ EPHER+EP SE  VEDPYPTALILTFTD DS+
Subjt:  MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQ-EPHERVEPESEKCVEDPYPTALILTFTDLDSV

Query:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK
        PSE NLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRT+DAETAFSSTGKYS+FGTALV YRLKFLPP KV  R   R RK
Subjt:  PSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRK

SwissProt top hitse value%identityAlignment
Q9M3G7 Serine/threonine-protein kinase ATM2.4e-0533.33Show/hide
Query:  NETVIPTAAEQDGAS-CPGVNSTNQEPH---ERVEP----ESEKCVEDPYP-----TALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAK
        N   +P  A     +  P +N TN EP     +VEP       K  E P       T L L F+   S+PS  +L   F  +GPL  S+T V ++   A+
Subjt:  NETVIPTAAEQDGAS-CPGVNSTNQEPH---ERVEP----ESEKCVEDPYP-----TALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAK

Query:  VVFKRTSDAETAFSSTGKYSLFGTALVSYRLK
        V F  ++DA  A  S  K + FG  LV++RL+
Subjt:  VVFKRTSDAETAFSSTGKYSLFGTALVSYRLK

Arabidopsis top hitse value%identityAlignment
AT3G48190.1 ataxia-telangiectasia mutated1.7e-0633.33Show/hide
Query:  NETVIPTAAEQDGAS-CPGVNSTNQEPH---ERVEP----ESEKCVEDPYP-----TALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAK
        N   +P  A     +  P +N TN EP     +VEP       K  E P       T L L F+   S+PS  +L   F  +GPL  S+T V ++   A+
Subjt:  NETVIPTAAEQDGAS-CPGVNSTNQEPH---ERVEP----ESEKCVEDPYP-----TALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAK

Query:  VVFKRTSDAETAFSSTGKYSLFGTALVSYRLK
        V F  ++DA  A  S  K + FG  LV++RL+
Subjt:  VVFKRTSDAETAFSSTGKYSLFGTALVSYRLK

AT3G54760.1 dentin sialophosphoprotein-related2.0e-1832.5Show/hide
Query:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVPS
        EA + E + DTYWTDR+I    E Q        T +G+ Q     + P   ++         S    PH   +  ++  +++  P  +I+ F + D++P 
Subjt:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVPS

Query:  ETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRL
        E +L+ +FR +GP+ E +TEV ++  RA+VVF++ +DAE A++S G++++FGT +V Y L
Subjt:  ETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRL

AT3G54760.2 dentin sialophosphoprotein-related2.0e-1832.5Show/hide
Query:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVPS
        EA + E + DTYWTDR+I    E Q        T +G+ Q     + P   ++         S    PH   +  ++  +++  P  +I+ F + D++P 
Subjt:  EASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVPS

Query:  ETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRL
        E +L+ +FR +GP+ E +TEV ++  RA+VVF++ +DAE A++S G++++FGT +V Y L
Subjt:  ETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRL

AT5G02950.1 Tudor/PWWP/MBT superfamily protein1.2e-2362.65Show/hide
Query:  PTALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAK
        P AL+L F D  SVPSE  LN+IF++YGPL+ESKT+V  K +RAKVVFKR  DA+TAFSS GKYS+FG +L+SYRL+++ P +
Subjt:  PTALILTFTDLDSVPSETNLNDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCATCTGACTCTGAATTTATTAAGGACACTTATTGGACTGATAGGTTAATCCAGGGAATTGCTGAAGATCAATTATCTTTTGAGAATCAAAATGAAACT
GTAGAAGGCCACGTTCAACCTCCAAATGAAACGGTTATCCCTACTGCTGCAGAGCAAGATGGGGCGTCATGCCCTGGTGTGAATTCTACAAATCAAGAGCCTCAT
GAACGTGTTGAACCAGAATCAGAGAAATGTGTGGAGGATCCATATCCCACAGCTCTGATTTTAACCTTTACAGACTTGGATTCCGTTCCTTCAGAAACAAATCTA
AATGACATATTTAGAAAATATGGGCCTCTGTATGAGTCAAAAACTGAAGTAATGAAGAAAAGTAGACGAGCCAAAGTAGTTTTCAAGCGAACTTCCGATGCCGAA
ACAGCTTTCAGCAGTACTGGGAAATACAGCCTTTTTGGAACTGCACTTGTGAGTTACCGCCTCAAGTTCTTGCCTCCGGCCAAAGTTCCATCGCGCCCGACAAGG
AGACGCAGAAAAGCAATGAAATCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCATCTGACTCTGAATTTATTAAGGACACTTATTGGACTGATAGGTTAATCCAGGGAATTGCTGAAGATCAATTATCTTTTGAGAATCAAAATGAAACT
GTAGAAGGCCACGTTCAACCTCCAAATGAAACGGTTATCCCTACTGCTGCAGAGCAAGATGGGGCGTCATGCCCTGGTGTGAATTCTACAAATCAAGAGCCTCAT
GAACGTGTTGAACCAGAATCAGAGAAATGTGTGGAGGATCCATATCCCACAGCTCTGATTTTAACCTTTACAGACTTGGATTCCGTTCCTTCAGAAACAAATCTA
AATGACATATTTAGAAAATATGGGCCTCTGTATGAGTCAAAAACTGAAGTAATGAAGAAAAGTAGACGAGCCAAAGTAGTTTTCAAGCGAACTTCCGATGCCGAA
ACAGCTTTCAGCAGTACTGGGAAATACAGCCTTTTTGGAACTGCACTTGTGAGTTACCGCCTCAAGTTCTTGCCTCCGGCCAAAGTTCCATCGCGCCCGACAAGG
AGACGCAGAAAAGCAATGAAATCTTAG
Protein sequenceShow/hide protein sequence
MEASDSEFIKDTYWTDRLIQGIAEDQLSFENQNETVEGHVQPPNETVIPTAAEQDGASCPGVNSTNQEPHERVEPESEKCVEDPYPTALILTFTDLDSVPSETNL
NDIFRKYGPLYESKTEVMKKSRRAKVVFKRTSDAETAFSSTGKYSLFGTALVSYRLKFLPPAKVPSRPTRRRRKAMKS