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Lcy06g021830 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g021830
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein MODIFIER OF SNC1 11-like
Genome locationChr06:46810408..46811336
RNA-Seq ExpressionLcy06g021830
SyntenyLcy06g021830
Gene Ontology termsGO:0016973 - poly(A)+ mRNA export from nucleus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040746 - THO1_MOS11, C-terminal domain
IPR044209 - Protein MODIFIER OF SNC1 11


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442609.1 PREDICTED: protein MODIFIER OF SNC1 11-like isoform X1 [Cucumis melo]8.8e-5078.77Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
        MAT+F  ELSE+ LPG K TLP D G  AAGNG+ ++  +  + A T E IESQ +AVGRIPE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF

Query:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA
        GIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKKKARLA
Subjt:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA

XP_011651924.1 protein MODIFIER OF SNC1 11 isoform X1 [Cucumis sativus]2.3e-5079.45Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
        MAT+FT ELS++ LPG K TLP   G AAAGNG+ ++  +  +  GT E IESQ +AVGRIPE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF

Query:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA
        GIDSVCGPDEMAKAEELKRKARAERFEL+TLSVATDEEAKKKARLA
Subjt:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA

XP_022934788.1 protein MODIFIER OF SNC1 11-like [Cucurbita moschata]8.2e-4873.29Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSE+ LPG KS LP +LG AAAGNG    + NR      PS S T   T E  ESQRA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKKKARL     F
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF

XP_023527279.1 protein MODIFIER OF SNC1 11-like [Cucurbita pepo subsp. pepo]1.4e-4773.29Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+F+ ELSE+ LPG KS LP +LG AAAGNG    + NR      PS S T   T E  ESQRAA+GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKKKARL     F
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF

XP_038904188.1 protein MODIFIER OF SNC1 11-like [Benincasa hispida]1.9e-5279.22Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSP---SSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRA
        MATNFT ELSE+ LPG K TLP +LGFAAAGNG  ++     SSAT+  T E IESQ AAVGRIPEY  SVFDIFKKIRRAERFGIPVRLSEAEKRFSRA
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSP---SSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRA

Query:  ERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF
        ERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+AT EEAKKKARLA    F
Subjt:  ERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF

TrEMBL top hitse value%identityAlignment
A0A0A0LDV0 Tho1_MOS11_C domain-containing protein1.1e-5079.45Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
        MAT+FT ELS++ LPG K TLP   G AAAGNG+ ++  +  +  GT E IESQ +AVGRIPE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF

Query:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA
        GIDSVCGPDEMAKAEELKRKARAERFEL+TLSVATDEEAKKKARLA
Subjt:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA

A0A1S3B640 protein MODIFIER OF SNC1 11-like isoform X14.2e-5078.77Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
        MAT+F  ELSE+ LPG K TLP D G  AAGNG+ ++  +  + A T E IESQ +AVGRIPE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF

Query:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA
        GIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKKKARLA
Subjt:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA

A0A5D3DNB7 Protein MODIFIER OF SNC1 11-like isoform X14.2e-5078.77Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
        MAT+F  ELSE+ LPG K TLP D G  AAGNG+ ++  +  + A T E IESQ +AVGRIPE  ASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERF

Query:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA
        GIDSVCGPDEMAKAEELKRKARAERFEL+TLS+ATDEEAKKKARLA
Subjt:  GIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLA

A0A6J1F8Q7 protein MODIFIER OF SNC1 11-like4.0e-4873.29Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSE+ LPG KS LP +LG AAAGNG    + NR      PS S T   T E  ESQRA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKKKARL     F
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF

A0A6J1J7D8 protein MODIFIER OF SNC1 11-like2.0e-4772.67Show/hide
Query:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA
        MAT+FT ELSE+ LPG KS LP +LG AAAGNG    + NR      PS S T   T E  ES+RA +GR  E+ ASVFDIFKKIRRAERFGIPVRLSEA
Subjt:  MATNFTAELSESILPGLKSTLPPDLGFAAAGNG----NGNR-----SPS-SATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEA

Query:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF
        EKRFSRAERFGIDSVCGPDEM KAEELKRKARAERFEL+TLS+ATDEEAKKKARL     F
Subjt:  EKRFSRAERFGIDSVCGPDEMAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHF

SwissProt top hitse value%identityAlignment
Q9LZ08 Protein MODIFIER OF SNC1 112.5e-1562.35Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKKARLA
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKKKARLA
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKKARLA

Arabidopsis top hitse value%identityAlignment
AT5G02770.1 unknown protein1.8e-1662.35Show/hide
Query:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKKARLA
        V DI KKIRRAERFG+ V+L+E EKR SRAERFG  +   V G +   KAEELKRKARA+RF + + +  TD   EEAKKKARLA
Subjt:  VFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDS---VCGPDEMAKAEELKRKARAERFELVTLSVATD---EEAKKKARLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAATTTCACAGCAGAACTCAGCGAAAGCATTCTTCCAGGACTGAAATCAACCCTACCGCCGGATTTAGGATTCGCTGCCGCTGGCAATGGCAATGGCAACCG
ATCTCCCTCGTCCGCAACTCTCGCCGGTACAACGGAACGCATTGAATCTCAACGTGCCGCCGTGGGGAGAATACCGGAGTATCGTGCTTCTGTTTTTGATATCTTCAAGA
AGATCCGTCGTGCAGAGCGGTTCGGGATTCCCGTTCGTCTATCGGAGGCAGAAAAGCGATTCTCTAGAGCTGAGAGGTTCGGCATCGATTCAGTATGTGGACCGGATGAA
ATGGCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCGTAACTTTGTCTGTCGCTACCGATGAGGAGGCAAAGAAGAAAGCTCGGCTTGCCAA
TTTGCCCCATTTTCATAAAGCTCCCTTTGGTTCAATAAAAACTAAAAAGCTACATCAACAAGTGTTATACTCAGCCAAGCCACTGTCCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACCAATTTCACAGCAGAACTCAGCGAAAGCATTCTTCCAGGACTGAAATCAACCCTACCGCCGGATTTAGGATTCGCTGCCGCTGGCAATGGCAATGGCAACCG
ATCTCCCTCGTCCGCAACTCTCGCCGGTACAACGGAACGCATTGAATCTCAACGTGCCGCCGTGGGGAGAATACCGGAGTATCGTGCTTCTGTTTTTGATATCTTCAAGA
AGATCCGTCGTGCAGAGCGGTTCGGGATTCCCGTTCGTCTATCGGAGGCAGAAAAGCGATTCTCTAGAGCTGAGAGGTTCGGCATCGATTCAGTATGTGGACCGGATGAA
ATGGCCAAAGCAGAGGAGCTGAAGAGAAAGGCAAGAGCAGAGAGATTTGAGCTCGTAACTTTGTCTGTCGCTACCGATGAGGAGGCAAAGAAGAAAGCTCGGCTTGCCAA
TTTGCCCCATTTTCATAAAGCTCCCTTTGGTTCAATAAAAACTAAAAAGCTACATCAACAAGTGTTATACTCAGCCAAGCCACTGTCCATCTAA
Protein sequenceShow/hide protein sequence
MATNFTAELSESILPGLKSTLPPDLGFAAAGNGNGNRSPSSATLAGTTERIESQRAAVGRIPEYRASVFDIFKKIRRAERFGIPVRLSEAEKRFSRAERFGIDSVCGPDE
MAKAEELKRKARAERFELVTLSVATDEEAKKKARLANLPHFHKAPFGSIKTKKLHQQVLYSAKPLSI