; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy06g021880 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g021880
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
Genome locationChr06:46841688..46846973
RNA-Seq ExpressionLcy06g021880
SyntenyLcy06g021880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ACN31793.1 unknown [Zea mays]8.0e-2146.98Show/hide
Query:  PRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKVHNPGRRNDGRKRHDCHRRHHEETQRRYQNSIQPRGDGVGS
        P   PP  SL GDG  +H  AA  A A+R+  R   +  R+   +  AC  + LPLH  +H+P RR+DGR+RHD HRRHHEE     Q+  +P GDG G+
Subjt:  PRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKVHNPGRRNDGRKRHDCHRRHHEETQRRYQNSIQPRGDGVGS

Query:  RSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVS
          +AAA DA A E   G   V G RQR+DGGA  A G  DGA +GR V+
Subjt:  RSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVS

XP_021302747.1 UPF0014 membrane protein STAR2 isoform X2 [Sorghum bicolor]1.6e-0844.35Show/hide
Query:  RGDGVGSRSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVSDRSHSAANCGDEFSDRSFDGEQYNVHLPLLAFLLHRRLPVGNGR
        RGDG  S  +AAA DA A E   G   VAG RQR+DGGAD A G  DGA +GR V+   H AA+   E +      +Q+ +HLPLLA +LH+ +P     
Subjt:  RGDGVGSRSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVSDRSHSAANCGDEFSDRSFDGEQYNVHLPLLAFLLHRRLPVGNGR

Query:  LC-LRLISFAFLISV
        LC L ++   F + V
Subjt:  LC-LRLISFAFLISV

XP_021302748.1 UPF0014 membrane protein STAR2 isoform X3 [Sorghum bicolor]5.9e-0849.47Show/hide
Query:  RGDGVGSRSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVSDRSHSAANCGDEFSDRSFDGEQYNVHLPLLAFLLHRRLP
        RGDG  S  +AAA DA A E   G   VAG RQR+DGGAD A G  DGA +GR V+   H AA+   E +      +Q+ +HLPLLA +LH+ LP
Subjt:  RGDGVGSRSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVSDRSHSAANCGDEFSDRSFDGEQYNVHLPLLAFLLHRRLP

XP_038980165.1 uncharacterized protein LOC108511366 isoform X1 [Phoenix dactylifera]1.4e-0946.99Show/hide
Query:  HFQSLSPALCYWLRSSVHLQPAEPRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKV
        H Q LSPALCY +R+ VHL   E R+D PRL +HG  C ++SR+AC+A +S K+     +F RN SD+  A   + + LHS V
Subjt:  HFQSLSPALCYWLRSSVHLQPAEPRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKV

TrEMBL top hitse value%identityAlignment
C0PC98 Uncharacterized protein3.9e-2146.98Show/hide
Query:  PRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKVHNPGRRNDGRKRHDCHRRHHEETQRRYQNSIQPRGDGVGS
        P   PP  SL GDG  +H  AA  A A+R+  R   +  R+   +  AC  + LPLH  +H+P RR+DGR+RHD HRRHHEE     Q+  +P GDG G+
Subjt:  PRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGDACGVKSLPLHSKVHNPGRRNDGRKRHDCHRRHHEETQRRYQNSIQPRGDGVGS

Query:  RSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVS
          +AAA DA A E   G   V G RQR+DGGA  A G  DGA +GR V+
Subjt:  RSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCGATTTCCTTCAAGGAATGACGAAGCCCTTTCTCGCCACTGCCATTGTCGCCGTCGCCGTCGTCCTCTCTTACTTGCAGAAGCTCGGCCTCGAAGGCGAAA
TGATCTACGCCATTTTCAGAGCCTTTCTCCAGCTCTCTGTTATTGGCTTCGTTCTTCAGTTCATCTTCAACCAGCAGAACCTCGCTTGGATCCTCCTCGCCTATCTCTTC
ATGGTGACGGTTGCGGGATACACAGCAGGGCAGCGTGCGAAGCACGTGCCTCGAGGAAAATTGGTCGCCGGAGCTTCAATTTTGGCCGGAACTTCAGTGACTATGGTGAT
GCTTGTGGTGTTAAAAGTCTTCCCCTTCACTCCAAGGTACATAATCCCGGTCGCCGGAATGATGGTCGGAAACGCCATGACTGTCACCGGCGTCACCATGAAGAGACTCA
GAGACGATATCAGAACTCAATTCAGCCTCGTGGAGACGGCGTTGGCTCTAGGAGCAACGCCGCGGCAAGCGACGCACCAGCAAGTGAAGAGAGCATTGGTGCTGGCATTG
TCGCCGGTGGTCGACAACGCGAAGACGGTGGGGCTGATCTCGCTCCCGGGGGCGATGACGGGGCTGATAATGGGCGGAGCGTCTCCGATCGAAGCCATTCAGCTGCAAAT
TGTGGTGATGAATTTTCTGATCGGAGCTTCGACGGTGAGCAGTATAATGTCCACTTACCTCTGCTGGCCTTCCTTCTTCACCGCCGCCTACCAGTTGGAAACGGCCGTCT
TTGCCTCCGCCTGATTTCCTTTGCCTTTCTCATTTCAGTTTTTCATTACTTTTTAGAGTTCAAATGTAAATTCAATTAG
mRNA sequenceShow/hide mRNA sequence
CAAGTAATCGCTTTCTCCACCGCATAGCCTTTTTACAAATACCTCATTCTCCACTCCCAATGTCCAAACAAAACAACCACAAATCTCTCTCTCTCTCTCTCTTTGTCTGT
TCCTCTGTTTTCGTCTCTGAATTCCTTGGATGGATCTTCAATGGCTTCTCGATTTCCTTCAAGGAATGACGAAGCCCTTTCTCGCCACTGCCATTGTCGCCGTCGCCGTC
GTCCTCTCTTACTTGCAGAAGCTCGGCCTCGAAGGCGAAATGATCTACGCCATTTTCAGAGCCTTTCTCCAGCTCTCTGTTATTGGCTTCGTTCTTCAGTTCATCTTCAA
CCAGCAGAACCTCGCTTGGATCCTCCTCGCCTATCTCTTCATGGTGACGGTTGCGGGATACACAGCAGGGCAGCGTGCGAAGCACGTGCCTCGAGGAAAATTGGTCGCCG
GAGCTTCAATTTTGGCCGGAACTTCAGTGACTATGGTGATGCTTGTGGTGTTAAAAGTCTTCCCCTTCACTCCAAGGTACATAATCCCGGTCGCCGGAATGATGGTCGGA
AACGCCATGACTGTCACCGGCGTCACCATGAAGAGACTCAGAGACGATATCAGAACTCAATTCAGCCTCGTGGAGACGGCGTTGGCTCTAGGAGCAACGCCGCGGCAAGC
GACGCACCAGCAAGTGAAGAGAGCATTGGTGCTGGCATTGTCGCCGGTGGTCGACAACGCGAAGACGGTGGGGCTGATCTCGCTCCCGGGGGCGATGACGGGGCTGATAA
TGGGCGGAGCGTCTCCGATCGAAGCCATTCAGCTGCAAATTGTGGTGATGAATTTTCTGATCGGAGCTTCGACGGTGAGCAGTATAATGTCCACTTACCTCTGCTGGCCT
TCCTTCTTCACCGCCGCCTACCAGTTGGAAACGGCCGTCTTTGCCTCCGCCTGATTTCCTTTGCCTTTCTCATTTCAGTTTTTCATTACTTTTTAGAGTTCAAATGTAAA
TTCAATTAGGCTAGTTTTTTGGTTTTTGTTTATAAACTTTAGTTTAATCCATAAATGGGCTAAAGTTTCGATTTAGTCTCTATGATTTGAAAATTTTTATTTTAGCGAAT
GATATGTTTTACTAATAATTTAGATTTGAA
Protein sequenceShow/hide protein sequence
MASRFPSRNDEALSRHCHCRRRRRPLLLAEARPRRRNDLRHFQSLSPALCYWLRSSVHLQPAEPRLDPPRLSLHGDGCGIHSRAACEARASRKIGRRSFNFGRNFSDYGD
ACGVKSLPLHSKVHNPGRRNDGRKRHDCHRRHHEETQRRYQNSIQPRGDGVGSRSNAAASDAPASEESIGAGIVAGGRQREDGGADLAPGGDDGADNGRSVSDRSHSAAN
CGDEFSDRSFDGEQYNVHLPLLAFLLHRRLPVGNGRLCLRLISFAFLISVFHYFLEFKCKFN