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Lcy06g022460 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g022460
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionlight-harvesting complex-like protein OHP1, chloroplastic
Genome locationChr06:47265238..47266909
RNA-Seq ExpressionLcy06g022460
SyntenyLcy06g022460
Gene Ontology termsGO:0009535 - chloroplast thylakoid membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137791.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucumis sativus]8.3e-4486.78Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N QD R CLF IG SVRAN+SRART FRIQ AAKPPAGVELPKVEPKF+APFLGFTKTAE+WNSRACMIGLIGIFVVELI
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

XP_022145630.1 light-harvesting complex-like protein OHP1, chloroplastic [Momordica charantia]6.3e-5290.76Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS MLSSSLLPARAPT NRQDGRLCLF IGSVRANNSRAR PFR+QAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACM+GL+GIF+VELIL+
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_022934608.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita moschata]2.6e-5088.24Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+T+LSSSLLPARAP  +RQDGRLCLF +GSVRANN RAR PFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_023526506.1 light-harvesting complex-like protein OHP1, chloroplastic [Cucurbita pepo subsp. pepo]1.3e-4987.39Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+T+LSSSLLPA AP  +RQDGRLCLF +GSVRANN RAR PFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

XP_038905156.1 light-harvesting complex-like protein OHP1, chloroplastic [Benincasa hispida]1.1e-5191.6Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS +LSSSLLPARAP  ++QDGRLCLF IGSVRANNSR+R PFR+QAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

TrEMBL top hitse value%identityAlignment
A0A0A0LAI0 Uncharacterized protein4.0e-4486.78Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N QD R CLF IG SVRAN+SRART FRIQ AAKPPAGVELPKVEPKF+APFLGFTKTAE+WNSRACMIGLIGIFVVELI
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNKGILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

A0A5A7TRS8 High-light-induced protein2.9e-4285.12Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI
        MASSS +L SSL PARA T N+QDGR  LF IG SVRANNSRAR  FR+Q AAKPPAGVELPKVEPKFEAPFLGFTKTAE+WNSRACMIGLIG FVVELI
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIG-SVRANNSRARTPFRIQ-AAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELI

Query:  LNKGILQVIGVDVGKGLDLPL
        LNK ILQVIGVDVGKGLDLPL
Subjt:  LNKGILQVIGVDVGKGLDLPL

A0A6J1CV10 light-harvesting complex-like protein OHP1, chloroplastic3.1e-5290.76Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASSS MLSSSLLPARAPT NRQDGRLCLF IGSVRANNSRAR PFR+QAAK PAGVELPKVEPKFEAPFLGFTKTAE+WNSRACM+GL+GIF+VELIL+
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVDVGKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1F851 light-harvesting complex-like protein OHP1, chloroplastic1.3e-5088.24Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+T+LSSSLLPARAP  +RQDGRLCLF +GSVRANN RAR PFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

A0A6J1J0W8 light-harvesting complex-like protein OHP1, chloroplastic1.3e-5088.24Show/hide
Query:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        MASS+T+LSSSLLPARAP  +RQDGRLCLF +GSVRANN RAR PFR+QAAKPPAGVELPKV+PKFEAPFLGFTKTAE+WNSRA MIGLIGIFVVELILN
Subjt:  MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGILQVIGVD+GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

SwissProt top hitse value%identityAlignment
O81208 Light-harvesting complex-like protein OHP1, chloroplastic6.2e-2656.3Show/hide
Query:  SSTMLSSSLLPARAPTSNRQDGR---LCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        SS+ LSSSL    +  S    GR   LC           +R + PF ++AAK P GV +PK +PK +  FLGFT+TAE+WNSRACMIGLIG F+VELILN
Subjt:  SSTMLSSSLLPARAPTSNRQDGR---LCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL

Arabidopsis top hitse value%identityAlignment
AT5G02120.1 one helix protein4.4e-2756.3Show/hide
Query:  SSTMLSSSLLPARAPTSNRQDGR---LCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN
        SS+ LSSSL    +  S    GR   LC           +R + PF ++AAK P GV +PK +PK +  FLGFT+TAE+WNSRACMIGLIG F+VELILN
Subjt:  SSTMLSSSLLPARAPTSNRQDGR---LCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILN

Query:  KGILQVIGVDVGKGLDLPL
        KGIL++IGV++GKGLDLPL
Subjt:  KGILQVIGVDVGKGLDLPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTCCTCTACGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACCAGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCATATTGGTTCTGTACGAGC
CAATAACAGCAGGGCTCGTACCCCTTTTAGGATTCAGGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGATTCA
CTAAAACTGCTGAAGTCTGGAACTCCAGAGCCTGCATGATAGGCCTCATTGGGATTTTTGTAGTAGAACTGATATTGAACAAAGGAATACTTCAGGTGATTGGAGTTGAT
GTTGGGAAAGGCCTGGATCTTCCTCTATGA
mRNA sequenceShow/hide mRNA sequence
GCCTTTCATTTAATTTAAGGTGGAAAAAGAAGTTCCTGAAAGAAATTGAAGAAGAAAGTTTCGATAACATTACCGAAGCAGTGGTTGTGGTTGTGTTTGGGGCATTACCA
AATAATGGCGTCCTCCTCTACGATGTTATCATCTTCTCTTCTTCCGGCCAGAGCTCCGACCAGTAACCGTCAAGACGGCCGACTCTGTCTCTTTCATATTGGTTCTGTAC
GAGCCAATAACAGCAGGGCTCGTACCCCTTTTAGGATTCAGGCCGCAAAGCCTCCGGCTGGAGTTGAATTGCCAAAAGTAGAGCCGAAATTTGAAGCCCCGTTTCTTGGA
TTCACTAAAACTGCTGAAGTCTGGAACTCCAGAGCCTGCATGATAGGCCTCATTGGGATTTTTGTAGTAGAACTGATATTGAACAAAGGAATACTTCAGGTGATTGGAGT
TGATGTTGGGAAAGGCCTGGATCTTCCTCTATGATTTCCAGCAAACTTGGAATAATCTTTGAGGTTCTTTGTTTTTTTTTTTAAAAAATTCAAAATTGTAACTGTAACAC
AGCACTTTCAACTGTATCAGAGAATTCTACATTCTTCAAGTTCTGATACTTCATAAGTAATTACATAACATTGTCAGTGTACAGACTATGCTCACTCTCTTGACTTAAGT
AAGGATACCTACTAACCAGAACTCGAGAAAATTGCAAACTAAATAAGCCTACAGATTCGAGTATCGATGACAGGCACCTTGGAAGGAAGCTGAGCTATGTCCAGTACTTC
TACTAGTGATATCCTGCGATTCTTCCAAGCACGTTCCGCCCAGTCCCGTATCATCTTTCCTTGAGCCTCTCTGTTCCGTTGGACCTCAAGTATTTCCGCGTATGCACCTA
CAGAGGCAACAATCAGTGATATCAATGAATATAATTTCATTTTCAGTCGATGCTCAGACCACCACGTTTATGAAGCTTAACATGTCTCTGTTACTATAACATGAGACTTT
ATGAGAGAGTTAAACCATAATCAGTGGTGAGGTATGATTAGAGTTCATCTGGGTTTTATTTAAGAGTGCAACTGAAAGCTATCCAATGTTTACTACTACGACTCTGGTAA
GAACATTTCGATCTGATGCAGTGATTTGTTCGTTCTTTTTACAAGCCTTGAGCCAAATGCTTAGAATGACTTGGATGCTTGATCAGTACCTCCAGCGATGGATGCTATGT
CACATCTGTCCACCTTTAATTGTTCTTCCGGGCCTTCAAAAGAATAAACCATTCAATTGAAATTGAAATTAATAAAAGAGTTAAGATGTTGAGTTGGTGTGCAATACCTT
CTGGTGAAACTTTCATCAAGTCTATTGCTCGCCTATAGAGTCCCTGTAAATGAATTTTTAGAGCAATCCGCTGAAATGTAACTAACAAGAAATACTATATAAACAATA
Protein sequenceShow/hide protein sequence
MASSSTMLSSSLLPARAPTSNRQDGRLCLFHIGSVRANNSRARTPFRIQAAKPPAGVELPKVEPKFEAPFLGFTKTAEVWNSRACMIGLIGIFVVELILNKGILQVIGVD
VGKGLDLPL