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Lcy06g022690 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g022690
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionDynein light chain
Genome locationChr06:47459411..47460381
RNA-Seq ExpressionLcy06g022690
SyntenyLcy06g022690
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0010274 - hydrotropism (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8518956.1 hypothetical protein F0562_016270 [Nyssa sinensis]2.3e-4073.83Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAV+RETDMP  +Q HV+ LAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVVG+ FG CITHL GSFIFF VD MEFL+FKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
         +GV QK
Subjt:  TVGVRQK

KGN58830.1 hypothetical protein Csa_001625 [Cucumis sativus]5.9e-4988.79Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAVVRETDMP GIQ HVL LAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV G+AFGGCITHL GS+IFFHVDTMEFL+FKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

XP_008442502.1 PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]5.4e-5090.65Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAVVRETDMP GIQ HVL LAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV G+AFGGCITHL GSFIFFHVDTMEFL+FKDGRDCSKSVEE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

XP_022145583.1 dynein light chain-like [Momordica charantia]2.0e-4989.81Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKA VRETDMP GIQ HVL LAYKALD HEVSDCQSIARFIKQRFDEAYGPAWHCVVG+AFGGCITHL GSFIFFHVD MEFLIFKDGRD SKS+EE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQKS
        T+GVRQKS
Subjt:  TVGVRQKS

XP_023540066.1 dynein light chain-like [Cucurbita pepo subsp. pepo]7.7e-4180.58Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGK VVRETDM   IQGH L LAYKALDQHEVSD QSIARFIKQR DEAYGPAW CVVG+AFGGCITH+ G+FIFFHVDTMEFLIFKD  DC KS++ 
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVG
        T+G
Subjt:  TVG

TrEMBL top hitse value%identityAlignment
A0A0A0LA26 Dynein light chain2.9e-4988.79Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAVVRETDMP GIQ HVL LAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV G+AFGGCITHL GS+IFFHVDTMEFL+FKDGRDC KSVEE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

A0A1S3B5U2 Dynein light chain2.6e-5090.65Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAVVRETDMP GIQ HVL LAYKALDQHEVSDCQSIA FIKQRFDEAYGPAWHCV G+AFGGCITHL GSFIFFHVDTMEFL+FKDGRDCSKSVEE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
        TVGV +K
Subjt:  TVGVRQK

A0A2P5EZ32 Dynein light chain1.4e-4073.15Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAVVRETDMP  +Q HV+ LAYKALD HEVSDCQSIA +IKQ+FDE YGPAW+CVVG+ FG CITHL GSFIFFHV+ MEFLIFKDG+D +++++E
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQKS
         +GV QK+
Subjt:  TVGVRQKS

A0A5J4ZMN8 Dynein light chain1.1e-4073.83Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKAV+RETDMP  +Q HV+ LAY+ALD HE SDCQSIA +IKQ+FDEAYGPAWHCVVG+ FG CITHL GSFIFF VD MEFL+FKDG+D ++S EE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQK
         +GV QK
Subjt:  TVGVRQK

A0A6J1CWC6 Dynein light chain9.9e-5089.81Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE
        MLEGKA VRETDMP GIQ HVL LAYKALD HEVSDCQSIARFIKQRFDEAYGPAWHCVVG+AFGGCITHL GSFIFFHVD MEFLIFKDGRD SKS+EE
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEE

Query:  TVGVRQKS
        T+GVRQKS
Subjt:  TVGVRQKS

SwissProt top hitse value%identityAlignment
O02414 Dynein light chain LC6, flagellar outer arm2.6e-1540.66Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG
        M E KAV++  DMP  +Q   +  A +AL++  +   + IA +IK+ FD+ Y P WHC+VGR FG  +TH +  FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG

O96860 Dynein light chain 2, cytoplasmic9.9e-1539.56Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG
        M + KAV++  DM   +Q   +  A +AL+++ +   + IA FIK+ FD+ Y P WHC+VGR FG  +TH +  FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG

Q22799 Dynein light chain 1, cytoplasmic7.6e-1538.46Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG
        M++ KAV++  DM   +Q   +  A +AL+++ +   + IA +IK+ FD+ Y P WHC+VGR FG  +TH +  FI+F++  +  L+FK G
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG

Q94748 Probable dynein light chain7.6e-1540.66Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM   +Q   +  A  ALD++E+   + +A +IK+ FD  Y P WHC+VG+ FG  +TH +  FI+F++    FL+FK G
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG

Q94758 Dynein light chain6.9e-1642.86Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG
        M E KAV++  DM   +Q   + +A  A+D+H++   + IA  IK+ FD  Y P WHC+VGR FG  +TH + +FI+F++D   FL+FK G
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDG

Arabidopsis top hitse value%identityAlignment
AT1G23220.1 Dynein light chain type 1 family protein7.8e-1540.96Show/hide
Query:  VRETDMPVGIQGHVLGLAYKALDQHE-VSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK
        VR +DMP+  Q     L+ + L+     +D + +A  +K+ FD AYGPAWHC+VG +FG  +TH +G F++F +D +  L+FK
Subjt:  VRETDMPVGIQGHVLGLAYKALDQHE-VSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK

AT1G52240.2 RHO guanyl-nucleotide exchange factor 115.9e-2353.93Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK
        MLEGKA+V ++DMPV +Q   +  A +ALD  +V DC+SIA  IK+ FDE YG  W CVVG  FG   TH  G+FI+F ++T++FLIFK
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK

AT3G16120.1 Dynein light chain type 1 family protein5.0e-2255.06Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK
        MLEGKA V ETDMPV +Q   + +A ++LD  +V D  SIA  IK+ FDE YG  W CVVG  FG   TH  G+FI+FH+ T+ FLIFK
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK

AT4G27360.1 Dynein light chain type 1 family protein6.2e-2050.56Show/hide
Query:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK
        MLEGKAV+ +TDM   ++   L LA KALD  +V++   IARFIK+ FD +YG  W C+VG  FG  +TH SG FI F V ++  L+FK
Subjt:  MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK

AT5G20110.1 Dynein light chain type 1 family protein6.0e-1543.59Show/hide
Query:  DMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK
        DMP  +Q H    A   LD  E    + +A  +K+ FD+ YGPAWHC+VG +FG  +TH +G FI+F +D +  L+FK
Subjt:  DMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGTGGGGATCCAGGGCCATGTCCTTGGGTTGGCTTATAAAGCTCTTGATCAACACGAAGTTTCC
GACTGTCAATCCATTGCACGTTTCATCAAACAGAGGTTTGATGAAGCTTATGGCCCGGCTTGGCATTGTGTGGTGGGCAGAGCGTTTGGAGGTTGCATTACGCAT
TTATCTGGTAGCTTCATCTTCTTCCATGTGGATACCATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGCGTTGAAGAGACCGTCGGAGTTCGC
CAGAAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGGGCAAAGCTGTGGTCCGCGAAACAGACATGCCAGTGGGGATCCAGGGCCATGTCCTTGGGTTGGCTTATAAAGCTCTTGATCAACACGAAGTTTCC
GACTGTCAATCCATTGCACGTTTCATCAAACAGAGGTTTGATGAAGCTTATGGCCCGGCTTGGCATTGTGTGGTGGGCAGAGCGTTTGGAGGTTGCATTACGCAT
TTATCTGGTAGCTTCATCTTCTTCCATGTGGATACCATGGAGTTTCTCATCTTTAAGGACGGAAGAGACTGCTCCAAAAGCGTTGAAGAGACCGTCGGAGTTCGC
CAGAAAAGTTAA
Protein sequenceShow/hide protein sequence
MLEGKAVVRETDMPVGIQGHVLGLAYKALDQHEVSDCQSIARFIKQRFDEAYGPAWHCVVGRAFGGCITHLSGSFIFFHVDTMEFLIFKDGRDCSKSVEETVGVR
QKS