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Lcy06g023660 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy06g023660
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionSel1-like protein
Genome locationChr06:48334587..48337552
RNA-Seq ExpressionLcy06g023660
SyntenyLcy06g023660
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]5.5e-4998Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_011651845.1 uncharacterized protein LOC101206121 [Cucumis sativus]1.4e-4796Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISG TE LNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]7.2e-4998Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022934323.1 uncharacterized protein LOC111441521 [Cucurbita moschata]7.9e-4895Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]1.9e-4693Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSDD+T DS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862542.7e-4998Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A5D3DNP0 Sel1-like protein2.7e-4998Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1DSS4 uncharacterized protein LOC1110240623.5e-4998Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSDDLTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1F7C2 uncharacterized protein LOC1114415213.8e-4895Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

A0A6J1J881 uncharacterized protein LOC1114821713.8e-4895Show/hide
Query:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS
        MEISGGTEGL+RVPLSEVVSDC KRWFKDTLKEAKAGDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASR RSSVWKVSDKHPGYNASDSDSD+LTRDS
Subjt:  MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)3.3e-3682.93Show/hide
Query:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL+EAKAG+I MQVL+GQMYYSGYGVP+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSD

AT5G05360.1 unknown protein4.3e-3670.65Show/hide
Query:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDD
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR RSS W+VSDK PGYNASDSDS+D
Subjt:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDD

AT5G05360.2 unknown protein1.1e-3167.86Show/hide
Query:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYN
        + G++ +NRVPL++VV DCV+RWF+DTLKEAK+GD+ MQVLVGQMY SGYG+P+D  KGR W+ KASR RSS W+VSDK PG N
Subjt:  SGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATTAGCGGAGGAACAGAAGGCTTGAATCGCGTCCCGTTATCAGAAGTTGTTTCCGATTGCGTCAAGAGATGGTTTAAGGACACTTTGAAAGAGGCCAAAGCTGG
GGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGAGTTCCTCGAGACGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCGAGATGTCGAT
CGTCGGTGTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGACTTGACTCGTGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
TTGTCAGTATATCCTCCTTAATTTTCAAAATCTTCCAAACGCTCAACCTTTTTTCCCTGGGTTTTTTTCTTTTCCCTTTTTTCTTTTAACCAGCAAGAGGACAACAATTT
TCGTACCAGCAAGAAGGAAGTTTAACGAAACAGCGTTTCGGCGCCTCAGAATCTCGCCAAATCATTAAAGTCAAGGTTTCGGTTGATCAATCGAAGCCGTTGAAGTTGAA
ATTCGATGGAGATTAGCGGAGGAACAGAAGGCTTGAATCGCGTCCCGTTATCAGAAGTTGTTTCCGATTGCGTCAAGAGATGGTTTAAGGACACTTTGAAAGAGGCCAAA
GCTGGGGATATCAACATGCAGGTCTTGGTGGGTCAAATGTATTATAGCGGTTATGGAGTTCCTCGAGACGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCGAGATG
TCGATCGTCGGTGTGGAAAGTTAGTGATAAACATCCAGGCTATAATGCTAGTGATTCAGATTCAGATGACTTGACTCGTGATTCTTAACCAGACCTGTGTTGCTGATTCC
TCTATGTCATGTCAAAACAACCACTGGATGTGCTTTTCACTGTGGAAACTCTACTTGCTGAGCTATCTCTGTAGCTGCGAAGAATTCGTTTACTTCCTTTCAATGTTGGA
TTTGACGGATGTAATATGCTTTGATTTTACCTTTACCCTACAAACAATTTGTCGCACTTCCTGTGGTCAAATAGGCTAAATCTTATATCCATTTTTCATTTTCTGTTTAG
GTTACCACTGTTCACTGTCTGCAGAAGATTTTCATTTGATTTTTGCATAAATGTCAAATTTTGAACTTTTTAGTTGCCATATCAAATTCCCTTTCAAGAACAGTATTGAA
CCTTTTCAATTATGCTACTATGCCTTCCCTTTTTTAGTTGCTAGCGTA
Protein sequenceShow/hide protein sequence
MEISGGTEGLNRVPLSEVVSDCVKRWFKDTLKEAKAGDINMQVLVGQMYYSGYGVPRDAQKGRIWMTKASRCRSSVWKVSDKHPGYNASDSDSDDLTRDS