; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g001070 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g001070
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRetrotransposon protein
Genome locationChr07:2829706..2831605
RNA-Seq ExpressionLcy07g001070
SyntenyLcy07g001070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064810.1 retrotransposon protein [Cucumis melo var. makuwa]2.0e-3837.84Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CSGFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT
        EL +VFG+DRA+                        G G +D  SV +   D   D+V  +  S+       +  S R+R S     +E +  A+D    
Subjt:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT

Query:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP
         L++IA W  +    +   R      ++E+ +    ++  L   LL+ M  +  F+ +P
Subjt:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP

KAA0065929.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-3940Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CSGFGWN+E KCI+AEKE+FD WV+SH AAKGLLNKPFP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVV
        EL +VFG+DRA+G   +    V SN      D       +   P    +  S R+R S     +E +  A+D     L++IA W  +    +   R    
Subjt:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVV

Query:  EQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP
          ++E+ +    ++  L   LL+ M  +  F+ +P
Subjt:  EQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP

XP_008441954.1 PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo]1.3e-4540.75Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CSGFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ
        +L++VFGKDRA+G+  +   +V SNV++   D +   D+   ++ PT  S G                         S R+R S   E +EV+ + M+  
Subjt:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ

Query:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK
           L+ IA W ++K   E   R  VV+Q+Q+I +    ++ +L+ +L   ++ IE FL++P  LK
Subjt:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK

XP_038887234.1 uncharacterized protein LOC120077425 [Benincasa hispida]1.1e-4141.15Show/hide
Query:  VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPH
        VE G   DNGTF+P YL  L+++L  K+P C + + +TI+ KVRSLK+QY+A++ ML    SGF WNEE+KC+  E+E+FD WV+SH  AKG+  KPFPH
Subjt:  VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPH

Query:  YEELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVG-PTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRK
        Y++L+ VFGKDRA     +  ++ S    D++ +  ++ S+     PTE S G S R+R+S+  EM+++V + ++ Q T + ++ASW+ +K+E E    K
Subjt:  YEELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVG-PTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRK

Query:  LVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLKK
         VV  I  I+  EE ++  L+++++ D++  + FLA+P   +K
Subjt:  LVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLKK

XP_038896380.1 uncharacterized protein LOC120084641 [Benincasa hispida]5.6e-4140.08Show/hide
Query:  VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPH
        VE G   DNGTF+  YL  L+R+L  K+P C + + +TI+ KVRSLK+QY+A++ ML    SGFGWNEE+KC+  EKE+FD WV+SH  AKG+ NK F H
Subjt:  VEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPH

Query:  YEELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKL
        Y++L+ VFGKDRA+    +  ++ S    D++ +  ++ S+        S+  S R+R S+  EM++++ + ++ Q T + ++ASW+++K+E E  RRK 
Subjt:  YEELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKL

Query:  VVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLKK
        VV  I  I+  +E ++   +++L+ D++  + FLA+P   +K
Subjt:  VVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLKK

TrEMBL top hitse value%identityAlignment
A0A1S3B4L3 uncharacterized protein LOC1034859536.2e-4640.75Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CSGFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ
        +L++VFGKDRA+G+  +   +V SNV++   D +   D+   ++ PT  S G                         S R+R S   E +EV+ + M+  
Subjt:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ

Query:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK
           L+ IA W ++K   E   R  VV+Q+Q+I +    ++ +L+ +L   ++ IE FL++P  LK
Subjt:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK

A0A5A7U0H7 Retrotransposon protein6.2e-4640.75Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L+RM+  K+P   I+ +STID  V+SLK+ Y AI  M GP CSGFGWNEE++CI+AE+++FD W+KSH AAKGLL+K FP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ
        +L++VFGKDRA+G+  +   +V SNV++   D +   D+   ++ PT  S G                         S R+R S   E +EV+ + M+  
Subjt:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNV--SDTSSSNVGPTERSTG------------------------SSSRRRTSYNREMMEVVTAAMDSQ

Query:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK
           L+ IA W ++K   E   R  VV+Q+Q+I +    ++ +L+ +L   ++ IE FL++P  LK
Subjt:  ITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALPMPLK

A0A5A7VCA3 Retrotransposon protein9.7e-3937.84Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CSGFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT
        EL +VFG+DRA+                        G G +D  SV +   D   D+V  +  S+       +  S R+R S     +E +  A+D    
Subjt:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT

Query:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP
         L++IA W  +    +   R      ++E+ +    ++  L   LL+ M  +  F+ +P
Subjt:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP

A0A5A7VKT2 Retrotransposon protein1.5e-3940Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CSGFGWN+E KCI+AEKE+FD WV+SH AAKGLLNKPFP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVV
        EL +VFG+DRA+G   +    V SN      D       +   P    +  S R+R S     +E +  A+D     L++IA W  +    +   R    
Subjt:  ELAFVFGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVV

Query:  EQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP
          ++E+ +    ++  L   LL+ M  +  F+ +P
Subjt:  EQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP

A0A5D3CWL2 Retrotransposon protein2.2e-3837.84Show/hide
Query:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE
        GG   DNGTF+P YLA+L RM+  K+P C + +T+ ID ++++LKR + AI  M GP CSGFGWN+E KCIVAEKE+FD WV+SH AAKGLLNKPFP+Y+
Subjt:  GGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYE

Query:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT
        EL +VFG+DRA+                        G G +D   V S   D   D+V  +  S        +  S R+R S     +E +  A+D    
Subjt:  ELAFVFGKDRAS------------------------GSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQIT

Query:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP
         L++IA W  +    +   R      ++E+ +    ++  L   LL+ M  +  F+ +P
Subjt:  SLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKKQLLNVLLADMKTIEFFLALP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G30140.1 unknown protein4.8e-0634.21Show/hide
Query:  SKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGS
        S+++ LK  Y +  + L    SGFGW+ E K   A  EV+ +++K+H   K +  +   H+E+L  +FG   A+GS
Subjt:  SKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGS

AT4G02210.1 unknown protein3.0e-0827.5Show/hide
Query:  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGC
        + ++ +SL+RQ++AI ++L     GF W+ E + + A+  V+ +++K+H  A+  + +P P+Y++L  + G      + C
Subjt:  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGC

AT4G02210.2 unknown protein3.0e-0827.5Show/hide
Query:  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGC
        + ++ +SL+RQ++AI ++L     GF W+ E + + A+  V+ +++K+H  A+  + +P P+Y++L  + G      + C
Subjt:  IDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFVFGKDRASGSGC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGAGGTTGAAGGAGGCAAAATTGGTGATAATGGAACGTTCAAACCCGACTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGA
ATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGACAGTACAGTGCGATTAACAATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATA
AGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGTCCCACTCAGCTGCAAAGGGTCTACTGAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTG
TTCGGCAAGGATCGAGCTAGTGGATCGGGGTGCGATGATCACCGATCAGTGTCGTCAAATGTTACAGACGATCTGGTGGACAATGTGTCTGACACAAGCAGCAGTAATGT
GGGGCCAACTGAGAGATCAACAGGATCAAGTAGTAGAAGACGAACTTCATATAACAGAGAGATGATGGAGGTCGTGACGGCTGCAATGGATAGCCAAATTACCAGCCTTC
AAAAGATTGCATCATGGCGAGAACAAAAACACGAACGGGAGGCTGCGCGACGGAAGTTGGTGGTCGAGCAAATTCAAGAAATAGAACAGTTTGAAGAAGGAGAGAAAAAA
CAACTTCTGAATGTCTTGCTCGCTGATATGAAAACAATTGAATTTTTCCTTGCCCTGCCCATGCCTTTAAAAAAAACATTGCATGGATGTACTTGGAAGAAACGAATGAC
TGGCTGTTACTGCAACCACTATTTCGATTGTGTAATATTTGTTTATGTTCAAGGATGGTTTGACTATCTTTCTGCTTTTCATGGAAACTTCTGCTTTCTAGAAAGAAATA
TTTTGCATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGAGGTTGAAGGAGGCAAAATTGGTGATAATGGAACGTTCAAACCCGACTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGA
ATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGACAGTACAGTGCGATTAACAATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATA
AGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGTCCCACTCAGCTGCAAAGGGTCTACTGAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTG
TTCGGCAAGGATCGAGCTAGTGGATCGGGGTGCGATGATCACCGATCAGTGTCGTCAAATGTTACAGACGATCTGGTGGACAATGTGTCTGACACAAGCAGCAGTAATGT
GGGGCCAACTGAGAGATCAACAGGATCAAGTAGTAGAAGACGAACTTCATATAACAGAGAGATGATGGAGGTCGTGACGGCTGCAATGGATAGCCAAATTACCAGCCTTC
AAAAGATTGCATCATGGCGAGAACAAAAACACGAACGGGAGGCTGCGCGACGGAAGTTGGTGGTCGAGCAAATTCAAGAAATAGAACAGTTTGAAGAAGGAGAGAAAAAA
CAACTTCTGAATGTCTTGCTCGCTGATATGAAAACAATTGAATTTTTCCTTGCCCTGCCCATGCCTTTAAAAAAAACATTGCATGGATGTACTTGGAAGAAACGAATGAC
TGGCTGTTACTGCAACCACTATTTCGATTGTGTAATATTTGTTTATGTTCAAGGATGGTTTGACTATCTTTCTGCTTTTCATGGAAACTTCTGCTTTCTAGAAAGAAATA
TTTTGCATGTGTAA
Protein sequenceShow/hide protein sequence
MDEVEGGKIGDNGTFKPDYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINNMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKSHSAAKGLLNKPFPHYEELAFV
FGKDRASGSGCDDHRSVSSNVTDDLVDNVSDTSSSNVGPTERSTGSSSRRRTSYNREMMEVVTAAMDSQITSLQKIASWREQKHEREAARRKLVVEQIQEIEQFEEGEKK
QLLNVLLADMKTIEFFLALPMPLKKTLHGCTWKKRMTGCYCNHYFDCVIFVYVQGWFDYLSAFHGNFCFLERNILHV