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Lcy07g002010 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g002010
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
Genome locationChr07:5870535..5870863
RNA-Seq ExpressionLcy07g002010
SyntenyLcy07g002010
Gene Ontology termsGO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR008906 - HAT, C-terminal dimerisation domain
IPR012337 - Ribonuclease H-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]5.1e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FSIGGRV +S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
KAA0048472.1 transposase [Cucumis melo var. makuwa]6.6e-1558.67Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FS GGRV++S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
KAA0056625.1 zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]6.6e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FS GGRVV+S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
TYK20303.1 transposase [Cucumis melo var. makuwa]5.1e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FSIGGRVV+S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GF+ +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
XP_038889356.1 zinc finger BED domain-containing protein RICESLEEPER 4-like [Benincasa hispida]3.9e-1562.16Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNV
        +STVAS+S+FSI GRVV+S+RCSL PKTVEA IC +NWLNS PI  DL+    + EAS+F++GFR I+D EK++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNV
TrEMBL top hitse value%identityAlignment
A0A5A7T9L0 Zinc finger BED domain-containing protein RICESLEEPER 3-like2.5e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FSIGGRV +S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
A0A5A7USY1 Zinc finger BED domain-containing protein RICESLEEPER 2-like3.2e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FS GGRVV+S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like3.2e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FS GGRVV+S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
A0A5D3D9R3 Transposase2.5e-1560Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FSIGGRVV+S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GF+ +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
A0A5D3DXX1 Transposase3.2e-1558.67Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
        +STVAS+S+FS GGRV++S+RCSL PKTVEALIC +NWLNS PI L       + EAS FE+GFR +++ EK ++
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD
SwissProt top hitse value%identityAlignment
P03010 Putative AC9 transposase3.2e-0458.97Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWL
        +STVAS+S+FS GGRVV+  R  L  + VEALIC K+W+
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWL
P08770 Putative AC transposase3.2e-0458.97Show/hide
Query:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWL
        +STVAS+S+FS GGRVV+  R  L  + VEALIC K+W+
Subjt:  MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWL
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACTGTAGCATCTAAGTCATCTTTTAGTATTGGAGGACGTGTAGTCAACTCAGCTCGTTGTTCTTTGACTCCAAAGACGGTGGAGGCTCTTATATGTGCTAAAAA
TTGGCTAAACTCTAAACCGATATCATTAGATCTTGATGATTTGATAGCCATAGCAGAAGCTTCAATGTTTGAAGATGGATTCAGACCAATTGTCGATGAAGAAAAGAACG
TGGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACTGTAGCATCTAAGTCATCTTTTAGTATTGGAGGACGTGTAGTCAACTCAGCTCGTTGTTCTTTGACTCCAAAGACGGTGGAGGCTCTTATATGTGCTAAAAA
TTGGCTAAACTCTAAACCGATATCATTAGATCTTGATGATTTGATAGCCATAGCAGAAGCTTCAATGTTTGAAGATGGATTCAGACCAATTGTCGATGAAGAAAAGAACG
TGGATTAA
Protein sequenceShow/hide protein sequence
MSTVASKSSFSIGGRVVNSARCSLTPKTVEALICAKNWLNSKPISLDLDDLIAIAEASMFEDGFRPIVDEEKNVD