; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g003280 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g003280
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionsplicing factor U2af small subunit B-like
Genome locationChr07:14174477..14176367
RNA-Seq ExpressionLcy07g003280
SyntenyLcy07g003280
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005681 - spliceosomal complex (cellular component)
GO:0089701 - U2AF (cellular component)
GO:0030628 - pre-mRNA 3'-splice site binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR000571 - Zinc finger, CCCH-type
IPR003954 - RNA recognition motif domain, eukaryote
IPR009145 - U2 auxiliary factor small subunit
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583606.1 Splicing factor U2af small subunit A, partial [Cucurbita argyrosperma subsp. sororia]3.3e-11397.52Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

XP_008461981.1 PREDICTED: splicing factor U2af small subunit B-like [Cucumis melo]1.2e-11297.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI RELRHELFA+Y RRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

XP_022964867.1 splicing factor U2af small subunit B-like [Cucurbita moschata]3.3e-11397.52Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

XP_022970323.1 splicing factor U2af small subunit B-like [Cucurbita maxima]9.5e-11397.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRR HSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

XP_023519661.1 splicing factor U2af small subunit B-like [Cucurbita pepo subsp. pepo]3.3e-11397.52Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

TrEMBL top hitse value%identityAlignment
A0A0A0LVA4 Uncharacterized protein3.0e-11296.53Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI RELRHELFA+Y RR SHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

A0A1S3CFU2 splicing factor U2af small subunit B-like6.0e-11397.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI RELRHELFA+Y RRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

A0A5D3CV58 Splicing factor U2af small subunit B-like6.0e-11397.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRI RELRHELFA+Y RRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

A0A6J1HM65 splicing factor U2af small subunit B-like1.6e-11397.52Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRRSHSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

A0A6J1I2J7 splicing factor U2af small subunit B-like4.6e-11397.03Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPR+IQDHFE+FYEDLFQEL+KYGEIESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHMVGNVYVQF+EEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFA YHRRR HSRSRSR
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

SwissProt top hitse value%identityAlignment
A1A4K8 Splicing factor U2AF 35 kDa subunit3.3e-6860.89Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQEL-SKYGEIESLN
        MAE+LASIFGTEKD+VNC FYFKIGACRHGDRCSRLH KP+ S T+ L N+Y+ P   +   D     +   E+Q+H+++F+E++F E+  KYGE+E +N
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQEL-SKYGEIESLN

Query:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRS
        VCDNL DH+VGNVYV+FR EE A  A+ +L+ R++ G+PI  + SPVTDFREA CRQYE   C RGG+CNFMHLK ISRELR EL   Y RRR   RSRS
Subjt:  VCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRS

Query:  RS
        RS
Subjt:  RS

Q6AUG0 Splicing factor U2af small subunit B8.4e-9678.71Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P++SPT++L+NMYQRPDMITPGVDAQG PIDP ++Q+HFEDFYED+++ELSK+GE+E+LNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR
        CDNLADHM+GNVYVQFREEEQA  A   L GRFY+GRPIIV++SPVTDFREATCRQ+EEN CNRGGYCNFMH+K+I RELR +L+     RRSH RSRS 
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSR

Query:  SP
        SP
Subjt:  SP

Q9FMY5 Splicing factor U2af small subunit B4.0e-9881.46Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELR +LF  Y   +RR S SRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS

Query:  RSRSP
        RS SP
Subjt:  RSRSP

Q9S709 Splicing factor U2af small subunit A1.6e-9982.84Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SRELR +LF  Y   +RR S SRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS

Query:  RSRS
        RSRS
Subjt:  RSRS

Q9ZQW8 Splicing factor U2af small subunit A4.8e-9982.76Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH KPS+SPTLLLSNMY RPDMITPG+DAQGNPIDP +IQ  FEDFYED+F+ELSKYGEIESL+V
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHR-RRSHSRSRS
        CDN ADHM+GNVYVQFREE+QAA AL+ L+GR+Y+GRPIIV+FSPV+DFREATCRQYEEN CNRGGYCNFMH+K I R+LR  LF   HR RRSHS  RS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHR-RRSHSRSRS

Query:  RSP
        RSP
Subjt:  RSP

Arabidopsis top hitse value%identityAlignment
AT1G10320.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.1e-3442.35Show/hide
Query:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHM
        FGTE+D+ +CPF+ K GACR G RCSR+H  P+ S TLL+ NMY  P  IT   D +G      E +  +E+FYED+  E  KYGE+ +  VC N + H+
Subjt:  FGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHM

Query:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRGGYCNFMHLKR
         GNVYV +R  E A  A ++++GR++AG+ +  +F  ++ ++ A C +Y ++    C+RG  CNF+H  R
Subjt:  VGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEEN---MCNRGGYCNFMHLKR

AT1G27650.1 U2 snRNP auxiliary factor small subunit, putative1.2e-10082.84Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS
        CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K +SRELR +LF  Y   +RR S SRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS

Query:  RSRS
        RSRS
Subjt:  RSRS

AT1G27650.2 U2 snRNP auxiliary factor small subunit, putative1.4e-6979.22Show/hide
Query:  MYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR
        MYQRPDMITPGVDAQG P+DPR+IQ+HFEDF+EDLF+EL K+GEIESLN+CDNLADHM+GNVYVQF+EE+QAA AL+ L GRFY+GRPII DFSPVTDFR
Subjt:  MYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFR

Query:  EATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRSRSRS
        EATCRQYEEN CNRGGYCNFMH+K +SRELR +LF  Y   +RR S SRSRSRS
Subjt:  EATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRSRSRS

AT5G42820.1 Zinc finger C-x8-C-x5-C-x3-H type family protein2.9e-9981.46Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELR +LF  Y   +RR S SRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS

Query:  RSRSP
        RS SP
Subjt:  RSRSP

AT5G42820.2 Zinc finger C-x8-C-x5-C-x3-H type family protein2.9e-9981.46Show/hide
Query:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV
        MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLH +P+ISPTLLLSNMYQRPDMITPGVD QG P+DP +IQDHFEDFYED+F+EL+K+GE+ESLNV
Subjt:  MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNV

Query:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS
        CDNLADHM+GNVYV F+EE+ AA AL+ L GRFY+GRPII DFSPVTDFREATCRQYEEN CNRGGYCNFMH+K+ISRELR +LF  Y   +RR S SRS
Subjt:  CDNLADHMVGNVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVY---HRRRSHSRS

Query:  RSRSP
        RS SP
Subjt:  RSRSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCATTTGGCATCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATCGGTGTTCGCGGTTGCA
TACGAAGCCGAGCATAAGCCCCACCCTCTTGCTTTCTAATATGTATCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCGAGA
TTCAGGACCATTTTGAGGATTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCTGACCACATGGTGGGT
AATGTCTATGTTCAATTTCGAGAGGAAGAACAAGCTGCAAATGCTCTTCGGAATCTGAGTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTTAC
AGACTTTAGAGAAGCTACTTGTAGGCAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGTAGAGAGCTGAGGCATGAAC
TGTTTGCAGTTTATCATCGAAGGCGTAGTCACAGTAGGAGCAGAAGCCGCAGCCCTATAGGCATCGTAGTTATGAAGAACGCTCTTATGGTAGGCATGGTCATAGTCGGA
GGTATGATGAAAGAGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTGGTCCTAAAAGAAGCAGAAGTCGTAGTCCACGAGGAAGGAAGAATCGA
AGTCCAGTTAGAGAAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAAGCAGCAAATGATAACAATGCCAATTCTGATAGCAACAAAAA
TAGCCATGAAAGAAGTTACAATG
mRNA sequenceShow/hide mRNA sequence
TTAATATCACTGAATCTTCTAGGCTTCAAATTCGCAAAAAGGAACCCCACAATTCCATCTCTCTCTCTCCCCTCCGGAATTACTCCAACGTTCACAGTTCACACCCACCC
TCATTGATTCTCCAGTTCTGTGGGGGGTTTGTTCTTTTTCCTCTTCATTATCTTTGGAATTTGGAGTCTGCAATTTCTCCGACGGGGAAGATTAGCAATGGCGGAGCATT
TGGCATCCATATTCGGGACGGAGAAGGACAGGGTTAACTGTCCCTTCTACTTCAAGATCGGGGCCTGCCGGCACGGTGATCGGTGTTCGCGGTTGCATACGAAGCCGAGC
ATAAGCCCCACCCTCTTGCTTTCTAATATGTATCAGAGACCCGACATGATTACTCCTGGTGTCGACGCGCAGGGGAATCCGATTGACCCTCGCGAGATTCAGGACCATTT
TGAGGATTTCTATGAAGATTTATTCCAGGAACTGAGCAAGTACGGGGAGATTGAAAGTTTGAATGTTTGTGACAATCTAGCTGACCACATGGTGGGTAATGTCTATGTTC
AATTTCGAGAGGAAGAACAAGCTGCAAATGCTCTTCGGAATCTGAGTGGCAGATTTTATGCTGGACGTCCAATCATTGTTGACTTCTCTCCAGTTACAGACTTTAGAGAA
GCTACTTGTAGGCAATATGAAGAAAACATGTGTAATCGTGGTGGATATTGCAATTTCATGCATTTGAAGAGGATCAGTAGAGAGCTGAGGCATGAACTGTTTGCAGTTTA
TCATCGAAGGCGTAGTCACAGTAGGAGCAGAAGCCGCAGCCCTATAGGCATCGTAGTTATGAAGAACGCTCTTATGGTAGGCATGGTCATAGTCGGAGGTATGATGAAAG
AGATGCTTATCATGAAAGTCGGAGCAGGAGGCATAGGAGTACAAGCCCTGGTCCTAAAAGAAGCAGAAGTCGTAGTCCACGAGGAAGGAAGAATCGAAGTCCAGTTAGAG
AAGGGAGTGAAGAGAGGCGTGCTAAAATTGAGCAGTGGAACAGGGAAAGAGAACAAGCAGCAAATGATAACAATGCCAATTCTGATAGCAACAAAAATAGCCATGAAAGA
AGTTACAATG
Protein sequenceShow/hide protein sequence
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITPGVDAQGNPIDPREIQDHFEDFYEDLFQELSKYGEIESLNVCDNLADHMVG
NVYVQFREEEQAANALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENMCNRGGYCNFMHLKRISRELRHELFAVYHRRRSHSRSRSRSPIGIVVMKNALMVGMVIVG
GMMKEMLIMKVGAGGIGVQALVLKEAEVVVHEEGRIEVQLEKGVKRGVLKLSSGTGKENKQQMITMPILIATKIAMKEVTM