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Lcy07g004860 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g004860
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
Genome locationChr07:26186041..26189254
RNA-Seq ExpressionLcy07g004860
SyntenyLcy07g004860
Gene Ontology termsNA
InterPro domainsIPR025836 - Zinc knuckle CX2CX4HX4C


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004293574.1 PREDICTED: uncharacterized protein LOC101304253 isoform X1 [Fragaria vesca subsp. vesca]1.1e-1042.68Show/hide
Query:  VLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC
        VL   IAN  GK  E++E     CWG  +R+RV +D+ QPLR+G+K+ L+G    +W+ F YE + EFC H G+  H   +C
Subjt:  VLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC

XP_011460179.1 PREDICTED: uncharacterized protein LOC101304253 isoform X2 [Fragaria vesca subsp. vesca]1.1e-1042.68Show/hide
Query:  VLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC
        VL   IAN  GK  E++E     CWG  +R+RV +D+ QPLR+G+K+ L+G    +W+ F YE + EFC H G+  H   +C
Subjt:  VLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC

XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]4.0e-1642.06Show/hide
Query:  LEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVI
        ++F  V +W+   D  L    K    + + + NA G  E+++   +  CWG+ +RVRV  D+ +PL +GIKLNLDGPMGG WIP  YE+L +F  H G +
Subjt:  LEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVI

Query:  RHKVKDC
         H +KDC
Subjt:  RHKVKDC

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]5.1e-1941.67Show/hide
Query:  KEVGMLEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCA
        K +  LEF+ V  W+   D  +    K + +    + NA G   ++D       WG S+R+RV+IDI++PLR+GIK+N+DGPMGG WIP  YE+L +FC 
Subjt:  KEVGMLEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCA

Query:  HYGVIRHKVKDCGRFYEMAK
          GVI H   DC   Y  A+
Subjt:  HYGVIRHKVKDCGRFYEMAK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.5e-1544.34Show/hide
Query:  LEFSLVRMWMD-SDLDLRPKILCVLQSF---IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGV
        L+F+ + +W+   DL L     C+ +     + NA G  EE D       WG+++RVRV++DIS+PLR+GIKLNLDGP+GG WIP  YE+L +FC H G+
Subjt:  LEFSLVRMWMD-SDLDLRPKILCVLQSF---IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGV

Query:  IRHKVK
           + K
Subjt:  IRHKVK

TrEMBL top hitse value%identityAlignment
A0A6J1BSZ1 uncharacterized protein LOC1110054812.0e-1642.06Show/hide
Query:  LEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVI
        ++F  V +W+   D  L    K    + + + NA G  E+++   +  CWG+ +RVRV  D+ +PL +GIKLNLDGPMGG WIP  YE+L +F  H G +
Subjt:  LEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVI

Query:  RHKVKDC
         H +KDC
Subjt:  RHKVKDC

A0A6J1DU55 uncharacterized protein LOC1110231352.5e-1941.67Show/hide
Query:  KEVGMLEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCA
        K +  LEF+ V  W+   D  +    K + +    + NA G   ++D       WG S+R+RV+IDI++PLR+GIK+N+DGPMGG WIP  YE+L +FC 
Subjt:  KEVGMLEFSLVRMWM---DSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCA

Query:  HYGVIRHKVKDCGRFYEMAK
          GVI H   DC   Y  A+
Subjt:  HYGVIRHKVKDCGRFYEMAK

A0A6J1DX30 uncharacterized protein LOC1110248742.2e-1544.34Show/hide
Query:  LEFSLVRMWMD-SDLDLRPKILCVLQSF---IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGV
        L+F+ + +W+   DL L     C+ +     + NA G  EE D       WG+++RVRV++DIS+PLR+GIKLNLDGP+GG WIP  YE+L +FC H G+
Subjt:  LEFSLVRMWMD-SDLDLRPKILCVLQSF---IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGV

Query:  IRHKVK
           + K
Subjt:  IRHKVK

A0A6P6FRB5 uncharacterized protein LOC1124898227.2e-1141.11Show/hide
Query:  ILCVLQSF---IANAYGKLEEMDEVHSAHCWG--TSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC
        +LC+ ++    I +  G L  +D     HCWG    +RVRV IDI +PLR+G+ +  DG     W+ F YE+LLEFC   G++ H  KDC
Subjt:  ILCVLQSF---IANAYGKLEEMDEVHSAHCWG--TSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC

A0A6P9EID8 uncharacterized protein LOC1183488562.7e-1045.45Show/hide
Query:  IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC
        I N  G +EE+D   S   WG  +R+RV ++ISQPL +GI + L G  G +WI F YE+L  FC   G + H+ KDC
Subjt:  IANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPMGGLWIPFTYEKLLEFCAHYGVIRHKVKDC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCGAAAATGGGGTCGTTTTCAAAATTTTCAGTGATTTTTCACTTGCAGAAGGAGGGAATGGAAAAGGAAAAGAAGTTGGGATGTTGGAATTTAGTTTG
GTTCGAATGTGGATGGACAGTGACCTCGACTTGCGACCAAAGATTCTGTGTGTCCTGCAGTCATTTATAGCTAATGCTTATGGAAAACTTGAGGAAATGGATGAG
GTCCATAGTGCCCACTGTTGGGGGACTAGTATTCGCGTACGAGTGATTATTGATATTTCTCAACCGTTGCGACAAGGAATCAAACTCAATCTAGATGGCCCAATG
GGGGGATTGTGGATACCATTTACGTACGAGAAGCTCCTAGAATTTTGTGCTCACTATGGAGTCATTCGCCATAAGGTCAAAGATTGTGGACGTTTCTATGAGATG
GCTAAGAAATGCGAGGGACAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCGAAAATGGGGTCGTTTTCAAAATTTTCAGTGATTTTTCACTTGCAGAAGGAGGGAATGGAAAAGGAAAAGAAGTTGGGATGTTGGAATTTAGTTTG
GTTCGAATGTGGATGGACAGTGACCTCGACTTGCGACCAAAGATTCTGTGTGTCCTGCAGTCATTTATAGCTAATGCTTATGGAAAACTTGAGGAAATGGATGAG
GTCCATAGTGCCCACTGTTGGGGGACTAGTATTCGCGTACGAGTGATTATTGATATTTCTCAACCGTTGCGACAAGGAATCAAACTCAATCTAGATGGCCCAATG
GGGGGATTGTGGATACCATTTACGTACGAGAAGCTCCTAGAATTTTGTGCTCACTATGGAGTCATTCGCCATAAGGTCAAAGATTGTGGACGTTTCTATGAGATG
GCTAAGAAATGCGAGGGACAATGA
Protein sequenceShow/hide protein sequence
MRSENGVVFKIFSDFSLAEGGNGKGKEVGMLEFSLVRMWMDSDLDLRPKILCVLQSFIANAYGKLEEMDEVHSAHCWGTSIRVRVIIDISQPLRQGIKLNLDGPM
GGLWIPFTYEKLLEFCAHYGVIRHKVKDCGRFYEMAKKCEGQ