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Lcy07g005000 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g005000
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptioncysteine-rich and transmembrane domain-containing protein A-like
Genome locationChr07:26705873..26709105
RNA-Seq ExpressionLcy07g005000
SyntenyLcy07g005000
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605218.1 hypothetical protein SDJN03_02535, partial [Cucurbita argyrosperma subsp. sororia]2.6e-3388.51Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPP  YAP YA    QPPPK +TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF

XP_008457737.2 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]2.2e-3592.94Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKD+YPPPGYPVQGYPAAQGY  PPPPPPGYAPQY+QPPPK E TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF

XP_011649307.1 cysteine-rich and transmembrane domain-containing protein WIH1 [Cucumis sativus]9.7e-3694.12Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY  PPPPPPGYAPQY+QPPPK E TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF

XP_022947085.1 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X2 [Cucurbita moschata]5.3e-3489.66Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPP  YAPQYA    QPPPK +TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF

XP_038901964.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Benincasa hispida]4.8e-3593.02Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY---PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFP KDAYPPPGYPVQGYPAAQGY   PPPPPPGYAPQYAQPPPK E TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY---PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0LJA6 CYSTM domain-containing protein4.7e-3694.12Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY  PPPPPPGYAPQY+QPPPK E TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF

A0A1S3C5S7 cysteine-rich and transmembrane domain-containing protein A-like1.0e-3592.94Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKD+YPPPGYPVQGYPAAQGY  PPPPPPGYAPQY+QPPPK E TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGY--PPPPPPGYAPQYAQPPPKQE-TGCLEGCLAALCCCCLLDACF

A0A6J1G5U7 cysteine-rich and transmembrane domain-containing protein WIH1-like isoform X22.6e-3489.66Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYP AQGYPPPPPP  YAPQYA    QPPPK +TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF

A0A6J1L666 cysteine-rich and transmembrane domain-containing protein WIH1-like5.4e-3286.21Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF
        MSYYDHQQPPVGAPPPQG PPKDAYPPPGYPVQGYP AQ YPPPPPP  YAPQYA    QP PK +TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPG-YAPQYA----QPPPKQETGCLEGCLAALCCCCLLDACF

A0A6P6GEI9 cysteine-rich and transmembrane domain-containing protein WIH17.3e-2981.61Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGY-PAAQGYPPP--PPPGYAPQYAQPPPKQE--TGCLEGCLAALCCCCLLDACF
        MSYY++QQPPVG PPPQG+PPKDAYPPPGYP QGY P  QGYPP   PP GYAPQYAQPPP+Q+  TGCLEGCLAALCCCCLLDACF
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGY-PAAQGYPPP--PPPGYAPQYAQPPPKQE--TGCLEGCLAALCCCCLLDACF

SwissProt top hitse value%identityAlignment
A5PLE2 Cysteine-rich and transmembrane domain-containing protein 11.1e-0546Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYP--PPPPPG-YAPQ-----YAQPPPKQET----------------GCLEGCLAALCCCCLLD
        Y  Q  P    P QG+P +  YPP GYP QGYP AQGYP  PP PPG Y  Q     Y QP P   T                 CL  C AALCCCCL D
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYP--PPPPPG-YAPQ-----YAQPPPKQET----------------GCLEGCLAALCCCCLLD

O16005 Rhodopsin2.1e-0458.06Show/hide
Query:  PPVGAPPPQGFPPKDA---YPPPGY--PVQGYPAAQGYPP---PPPPGYAPQYAQP---PPK
        PP G  PPQG+PP  A   YPP GY  P QGYP AQGYPP   PPP G  PQ A P   PP+
Subjt:  PPVGAPPPQGFPPKDA---YPPPGY--PVQGYPAAQGYPP---PPPPGYAPQYAQP---PPK

Q8LCL8 Cysteine-rich and transmembrane domain-containing protein B2.0e-1255.56Show/hide
Query:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPAAQGYP----PP---PPPGYA----PQYAQPPPKQE-----TGCLEGCLAALCCCCLLDACF
        QQPP VG PP   +    PPKDAYPPPG  YP QGYP  QGYP    PP   PP GY     PQ   PP +Q+      G LEGC+AALCC C+LDACF
Subjt:  QQPP-VGAPPPQGF----PPKDAYPPPG--YPVQGYPAAQGYP----PP---PPPGYA----PQYAQPPPKQE-----TGCLEGCLAALCCCCLLDACF

Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH26.6e-1961.39Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPP-----------PPGYAPQYAQPPPKQE----TGCLEGCLAALCCCCLLDAC
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP  QGYPP             PP YAPQY  PP  Q+     G LEGCLAALCCCCLLDAC
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPP-----------PPGYAPQYAQPPPKQE----TGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH11.9e-1867.47Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPGYAPQYAQ-PPPKQETGCLEGCLAALCCCCLLDACF
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    P   PQY+Q P  KQ  G LEGCLAALCCCCLLDACF
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPGYAPQYAQ-PPPKQETGCLEGCLAALCCCCLLDACF

Arabidopsis top hitse value%identityAlignment
AT2G41420.1 proline-rich family protein4.7e-2061.39Show/hide
Query:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPP-----------PPGYAPQYAQPPPKQE----TGCLEGCLAALCCCCLLDAC
        MS Y+  QPPVG PPPQG+P    PKDAYPP GYP QGYP  QGYPP             PP YAPQY  PP  Q+     G LEGCLAALCCCCLLDAC
Subjt:  MSYYDHQQPPVGAPPPQGFP----PKDAYPPPGYPVQGYPAAQGYPPPP-----------PPGYAPQYAQPPPKQE----TGCLEGCLAALCCCCLLDAC

Query:  F
        F
Subjt:  F

AT3G49845.1 unknown protein1.9e-1345.24Show/hide
Query:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPV---------------------------QGYPAAQGYPPPP-PPGYAPQY---AQPPP-----------
        MSY D Q  PV APPPQG+PPK+ YPP GYP                            QGYP AQGYPPP  P G+ PQY     PPP           
Subjt:  MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPV---------------------------QGYPAAQGYPPPP-PPGYAPQY---AQPPP-----------

Query:  --KQETGCLEGCLAALCCCCLLDACF
          K   G +EGCLA LCCC LL+ACF
Subjt:  --KQETGCLEGCLAALCCCCLLDACF

AT4G19200.1 proline-rich family protein5.5e-0546.88Show/hide
Query:  PPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAQPPPKQETGCLEGCLAAL
        PP G PP QG+PP   YPP GYP   YPAA G  PP P GY P     P    +G   G L  +
Subjt:  PPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAQPPPKQETGCLEGCLAAL

AT4G33660.1 unknown protein4.5e-0750Show/hide
Query:  PVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAQPPPKQETGCLEGCLAALCCCCLLDAC
        P G PPP G PP+  YPPP             PPPPPP        PPP ++ G LEG LAALCCCCL+D C
Subjt:  PVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAQPPPKQETGCLEGCLAALCCCCLLDAC

AT5G67600.1 unknown protein1.4e-1967.47Show/hide
Query:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPGYAPQYAQ-PPPKQETGCLEGCLAALCCCCLLDACF
        Y  +Q PVGAPPPQG+PPKD YPP GYP  GYP    AQGYP    P   PQY+Q P  KQ  G LEGCLAALCCCCLLDACF
Subjt:  YDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPA---AQGYPPPPPPGYAPQYAQ-PPPKQETGCLEGCLAALCCCCLLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTATTACGACCACCAACAGCCGCCCGTTGGGGCTCCGCCACCGCAAGGGTTCCCTCCCAAGGACGCCTACCCTCCGCCAGGATACCCTGTTCAAGGCTACCCTGC
AGCTCAAGGGTACCCCCCTCCTCCGCCGCCGGGCTATGCCCCACAGTACGCTCAGCCTCCTCCCAAGCAAGAAACTGGTTGCCTTGAAGGATGTTTAGCAGCACTTTGCT
GTTGTTGTCTCTTGGATGCCTGCTTCTAA
mRNA sequenceShow/hide mRNA sequence
AAACAAAAAAGTGAAGAAAACGCGTGGGTGCATGAAATTGGAATCTTTTTTTAACAGTGAATGGGTTCTTGATTTGGCGGAAAAGAATACCAAATTTCCCTCATTCCAAG
AAAACCAAAAGCCAAATTCCAATTCCATTTCATCAGTGGGATTTGATTTGGGAAACACCCAAACCATTCCAATACAATAATATAAACATTCATCACTCTTATTCTTCCTT
CCCATTTCCAGCCTTTCGGTTTATTCTATTCCCACTCTTTTCTCTTAACAATTTTTTTCACAATCCCTCTTCTTCTTCTTCCTCAACTTCCCTTTCTAATTGAATCATCT
CCCTCGCCAGAATTCTCCAATTACCATGAGTTATTACGACCACCAACAGCCGCCCGTTGGGGCTCCGCCACCGCAAGGGTTCCCTCCCAAGGACGCCTACCCTCCGCCAG
GATACCCTGTTCAAGGCTACCCTGCAGCTCAAGGGTACCCCCCTCCTCCGCCGCCGGGCTATGCCCCACAGTACGCTCAGCCTCCTCCCAAGCAAGAAACTGGTTGCCTT
GAAGGATGTTTAGCAGCACTTTGCTGTTGTTGTCTCTTGGATGCCTGCTTCTAATAAGGATGGATCTTGAGCAGTACTGAACTTATTATATTATAATTTCATTGTAGTAT
GACAATCATCAAATATTGTTATGTTAATAATGCTTTTAGAGAACATTCAAATTAGTGAATTACATGCTTGGCTCATTAACTTATAAATATAGATTTTTGGTCTAATGTTT
GGATTAAATGTAGGGTGTGGTTCCACTTGAAGATTAAATCCCTTGTGTTTT
Protein sequenceShow/hide protein sequence
MSYYDHQQPPVGAPPPQGFPPKDAYPPPGYPVQGYPAAQGYPPPPPPGYAPQYAQPPPKQETGCLEGCLAALCCCCLLDACF