; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g005490 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g005490
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationChr07:28782813..28785560
RNA-Seq ExpressionLcy07g005490
SyntenyLcy07g005490
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR043502 - DNA/RNA polymerase superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO59710.1 reverse transcriptase [Corchorus capsularis]6.7e-16345.47Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP
        +ILE +   I+ + N  L++ FT EEI+  +K++HPTKAPGPDG+   F++K+W +V                                  PK +  FRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+VLYKI+SKVL NRLK +L   IS SQSAFVPGR+ITDN ++ FE +H++++++ GK G  ALKLDMSKAYDRVEW ++E +M +MGF RRW++LI
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        M+CVR+V F V++NG+ +  F P+ GLRQGDPLSPYLFL+C EGLS LL++  T   ++G+ +++  P ++HLF+ADDSLLF KA + E   VK  L IY
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E+  GQ IN++KS    S N  +    RVK +  V     + +YLGLP+   RNK+  FN  K+R+ K +  W   + S  GRE++IK+V Q+IP YAM+
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
         F F  +L N++N M +RFWW     +R I+W  W+KLC  K  GGMGFRD+  FNQA+LAKQ W++L  PDSL+ RVLK RYFP + FL+A  G  PS+
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVA-NRNAQNYTVAQLLDQ-DRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD
        TWRSIL GRDL + G RWRIGNG  V    D W+ +     P     +   +  VA L+ +   +W  DL+R +FIE++A  I+ IP+    + D ++W 
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVA-NRNAQNYTVAQLLDQ-DRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD

Query:  LDPKGIFSVRSAYRLATNSNVRMTHRDQGMVIRRPFGNNI
         D KGI+SV+S YR+  N         + ++  +P+ + I
Subjt:  LDPKGIFSVRSAYRLATNSNVRMTHRDQGMVIRRPFGNNI

XP_006491472.1 uncharacterized protein LOC102626455 [Citrus sinensis]2.6e-16245.98Show/hide
Query:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRPISLCSVLYK
        +S + N  L  PFT E+I   + +M PTKAPGPDG+ A F+QK+W +V +                                P+ + +FRPISLC+V+Y+
Subjt:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRPISLCSVLYK

Query:  IVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVRF
        IV+K +ANRLK +LN IISP+QSAF+P R+ITDN IIG+EC+H +R  +  ++GLVALKLD+SKAYDRVEW ++E+ M  +GFS +WI LIM C+ T  F
Subjt:  IVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVRF

Query:  QVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTIN
         VL+NGNP     P+RGLRQG PLSPYLF++CAE  S LLNQA  ++ + GL+  +   T+THL +ADDSL+F KA+  +C+++K I + Y KA GQ  N
Subjt:  QVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTIN

Query:  YDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLT
        ++KS+   S   + + I  +K + Q+       +YLGLP    RNK   F   K +V   +  W    FSA G+EILIKAVAQ++P YAMS FK    L 
Subjt:  YDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLT

Query:  NELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSYTWRSILWGR
         ++    ARFWWG+ + +  IHW  W  +   K +GG+GFRDL  FNQA++AKQ WR++R P+SL+ RV+K RY+ +S F  A +GSNPS+ WRSILWG 
Subjt:  NELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSYTWRSILWGR

Query:  DLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNYTVAQLLDQDRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWDLDPKGIFSVRS
         + KKG RWRIG+G +V    D WIPR     PI          VA L+D +  W+ D +   F+++D   IL I +     EDE++W  D KG +SV+S
Subjt:  DLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNYTVAQLLDQDRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWDLDPKGIFSVRS

Query:  AYRLATNSN
         Y+LA N N
Subjt:  AYRLATNSN

XP_023878301.1 uncharacterized protein LOC111990748 [Quercus suber]2.0e-16245.94Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP
        ++ E +P  ++++ N  L+  FT+EE+   +K++HP KAPGPDG+ A+F+QKYW +V                                ++PK + DFRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+V+YK++SK+LANRLK +L  IIS +QSAF   R+ITDN ++ FE +H + +K  GK+G +A+KLDMSKA+DRVEW +I ++M++MGF  RW DL+
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        MQC+ +V + +L+NG       P RGLRQGDPLSP LFL+CAEGLS L+NQA   + +TG+ IN+ CP +THLF+ADDS+LF KA   EC  ++ IL  Y
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E+A GQ IN DKS+   SPNT ++    + ++L         +YLGLPS   R+K ++F   K++V   L GWKG   S  G+EILIKAVAQ+IP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CF     L +++  M   FWWG    E ++ W SWK++C  K  GG+GFR+L  FN AMLAKQ+WRIL +P+SL+ RVLK RYFP+   L A LGS+PSY
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVAN-RNAQNYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD
        +WRSI    ++ ++G RWR+GNG Q+    D W+P       I     N +   V+ L+D D + WK + +R +F+  +   IL IP+  +  ED++IW 
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVAN-RNAQNYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD

Query:  LDPKGIFSVRSAYRLA
         + KG FSV+SAY +A
Subjt:  LDPKGIFSVRSAYRLA

XP_023881891.1 uncharacterized protein LOC111994244 [Quercus suber]1.1e-16547.08Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP
        ++L+ +P  ++++ N  L+  FTREEI   + +MHPTKAPGPDG+ AIF+QKYW++V                                 +P  + DFRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+V+YK++SKVLANRLK +L  IIS +QSAF+ GR+ITDN ++ FE +H + +K++GK+G  A+KLDMSKAYDRVEW +I+++M+KMGF  +WI L+
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        M C+ +V + +L+NG       P RGLRQGDP+SPY+FL+CA+G S LLN    +  ++G+ I + CP +THLF+ADDSLLF KA + EC+ +  IL++Y
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E A GQ IN DKS+   S NT ++    V  +L         +YLGLPS   ++K EIF   K+RV + L GWK    S  GREILIKAVAQ+IP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CF+   +L  E+ +M  RFWWG    E +I W SWKKLC  K  GGMGFR+L  FN AMLAKQ WR++ +P+SL+ ++ K RY+P     +A LG++PSY
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNY-TVAQLLDQDR-TWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD
        TWRSI  G ++ ++G RWR+GNG ++    D W+P       I   +   +Y  V+ L+D++R  WK+D+VRDLF+  +A  IL+IP+  +  ED+IIW 
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNY-TVAQLLDQDR-TWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD

Query:  LDPKGIFSVRSAYRLA
         + KG FSV+SAY +A
Subjt:  LDPKGIFSVRSAYRLA

XP_030923330.1 uncharacterized protein LOC115950239 [Quercus lobata]1.8e-16346.76Show/hide
Query:  MPKILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDF
        M + L+ +   +++D    L + FT EE+   + +M PTKAPGPDG+ A+FYQK+W +V D                                P+ + +F
Subjt:  MPKILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDF

Query:  RPISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWID
        RPISLC+V+YKI+SKVLANRLK+VL  IIS +QSAFVPGR+ITDN ++ +E +H +  ++KGK G VALKLD+SKAYDRVEW +++ +M+KMGF   WI+
Subjt:  RPISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWID

Query:  LIMQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILE
         +M CV T  F +L+NG P     P RG+RQGDP+SPYLFL+CAEGL+ LLN+A     +TG+ I +  P +T+L +ADDSLLF +AT  E E +  IL+
Subjt:  LIMQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILE

Query:  IYEKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYA
        IYE+A GQ+IN +KS+   S NT+E    ++ ++L V   +   +YLGLP+   R K   F+  KDRVWK LQGWKG   S AG+EILIKAVAQ+IP Y 
Subjt:  IYEKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYA

Query:  MSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNP
        MS F+  + L +EL ++CARFWWG   +ER+IHW+SW KL   K +GGMGFRDL  FN AMLAKQ WR+++  DSLL R  K RYFP S FL+A    N 
Subjt:  MSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNP

Query:  SYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI-VANRNAQNYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEII
        S+ WRS++  + + + GY WR+GNG  + A  D W+P       +    R+     VA+L++ +   W  + +R +F   +A  I  IP+ R    D I 
Subjt:  SYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI-VANRNAQNYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEII

Query:  WDLDPKGIFSVRSAYRLA
        W   P+G+FSV+SAY +A
Subjt:  WDLDPKGIFSVRSAYRLA

TrEMBL top hitse value%identityAlignment
A0A2N9FNH6 Reverse transcriptase domain-containing protein7.5e-16847.9Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP
        +++  + + ++   N  L++PFT EEI   + +MHPTKAPGPDG+ A+FYQK+W +V D                                P+ +  FRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+VLYKI+SKVLANRLK VL+ IIS +QSAFVPGR+ITDN ++ FE +H ++ KRKG+   +A+KLDMSKAYDRVEW ++E MM K+GF +RW++LI
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        MQC+ +V + V+LNG P+    P RG+RQGDPLSPYLFLICAEGL+ LL QA     V GL I +  P ++HLF+ADDSLLF +A   EC+++  IL+ Y
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E+A GQ +N++K++   S NT+ DL   +  +L+ + T  LG+YLGLP    R KK+ F   K ++ K L GWKG   S AGREILIK+VAQ+IP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CF+   +L +E+NSM ++FWWG    E++IHW+ W  +C  K++GGMGFRDLT+FNQA+LAKQ WR+L+ P++LL R+LK +YFP+  F++A++  + S+
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQ----NYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI
         WRSI   R + +KG RWRIGNG QV    D WI     T P  +    Q    N TV+ L+D + R W   L+  +F   +A  I  IP+  H   D +
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQ----NYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI

Query:  IWDLDPKGIFSVRSAYRL
        +W   P G F+ RSAY L
Subjt:  IWDLDPKGIFSVRSAYRL

A0A2N9HTH6 Reverse transcriptase domain-containing protein2.0e-16847.41Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP
        K L  M   +++  N +LV+ FT EE++  +K+M+PTKAPGPDG+ AIFYQ YW++V                                 +P  + D+RP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        I+LC+V+YKIVSK+LANRLK+VL  +IS +QSAFVPGR+ITDN ++ FE +H++  K +GK G +ALKLDMSKAYDRVEW ++E +M ++GF   WI LI
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        M C+ TV + +LLNG  S  F   RG+RQGDPLSPY+FL+CAEGLS LL +   +R +TG+  ++  P LTHLF+A+DS+LF +A++  C  +  IL+IY
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E+A GQ +N  K++   + NT+  + Q +K++  V   +S  +YLGLPS   R+KK  FN  KDRVW+ + GWK    S AGREILIKAVAQSIP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CFK   SL NELNSM + FWWG   + R +HW  W+KLC+ K  GG+GFRDL  FN A+LAKQ WRIL+ P SL+ RV K +YF +S+F+ A LG+ PSY
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNYTVAQ-----LLDQDRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI
         WRSI   R++   G RW IG+G  VE   DPW+P +G+    + + + Q   + +     +L   + W  +L++++F E +A  I++IP+    R D +
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNYTVAQ-----LLDQDRTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI

Query:  IWDLDPKGIFSVRSAYRL
         WD    G+FSV+SAY L
Subjt:  IWDLDPKGIFSVRSAYRL

A0A2N9J3U0 Reverse transcriptase domain-containing protein7.5e-16847.9Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP
        +++  + + ++   N  L++PFT EEI   + +MHPTKAPGPDG+ A+FYQK+W +V D                                P+ +  FRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSD--------------------------------PKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+VLYKI+SKVLANRLK VL+ IIS +QSAFVPGR+ITDN ++ FE +H ++ KRKG+   +A+KLDMSKAYDRVEW ++E MM K+GF +RW++LI
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        MQC+ +V + V+LNG P+    P RG+RQGDPLSPYLFLICAEGL+ LL QA     V GL I +  P ++HLF+ADDSLLF +A   EC+++  IL+ Y
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E+A GQ +N++K++   S NT+ DL   +  +L+ + T  LG+YLGLP    R KK+ F   K ++ K L GWKG   S AGREILIK+VAQ+IP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CF+   +L +E+NSM ++FWWG    E++IHW+ W  +C  K++GGMGFRDLT+FNQA+LAKQ WR+L+ P++LL R+LK +YFP+  F++A++  + S+
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQ----NYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI
         WRSI   R + +KG RWRIGNG QV    D WI     T P  +    Q    N TV+ L+D + R W   L+  +F   +A  I  IP+  H   D +
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQ----NYTVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEI

Query:  IWDLDPKGIFSVRSAYRL
        +W   P G F+ RSAY L
Subjt:  IWDLDPKGIFSVRSAYRL

A0A7N2L6Z9 Reverse transcriptase domain-containing protein6.8e-16949.03Show/hide
Query:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP
        ++   +P  I+++ N +L   FTREEI   +K++HPTK+PGPDG+ AIF+QKYWD+V                                S+PK + DFRP
Subjt:  KILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRP

Query:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI
        ISLC+V+YK++SK LANRLK  L  II+ +QSAF   R+ITDN +I +E +H +++K+ GKD  +A KLDMSKA+DRVEW +IER+M KMGF+  WI LI
Subjt:  ISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLI

Query:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY
        M+C+ +V + V++NG      VP RGLRQGDPLSPYLFL+CAEGLS LL+ A   + + G+ + + CP +THLF+ADDSLLF KA   ECE +K ILE Y
Subjt:  MQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIY

Query:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        E A GQ +N DKS+   SPNT  +L + + ++L         +YLGLPS   R+KK +F   K+RV   L GWKG   S+ G+EILIKAVAQ+IP Y MS
Subjt:  EKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY
        CF    SL +EL  M   FWWG    E ++ W SW+K+C  K+ GG+GFR+L  FN A+LAKQ+WRIL +P SL  R+LK +YFP    L A+LGSNPSY
Subjt:  CFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSY

Query:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNY-TVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD
        TWRSI    ++ KKG RWR+GNG ++    D W+P       I   R  ++Y  V+ L+D D R WK D +R LF+  DA  IL IP+  +  +D IIW 
Subjt:  TWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNY-TVAQLLDQD-RTWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWD

Query:  LDPKGIFSVRSAYRLATN
         + KG FSV+SAY +A N
Subjt:  LDPKGIFSVRSAYRLATN

A0A7N2LIH6 Uncharacterized protein6.3e-16746.99Show/hide
Query:  LEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRPIS
        LE M   ++ + N +L   F   E++  +++MHPTKAPGPDG+  IFYQKYWD+V                                 +P+ + +FRPIS
Subjt:  LEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRPIS

Query:  LCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQ
        LC+V+YKI+SKVLANRLK+VL+ +I  +QSAFVPGR+ITDN I+ FE +H++  +RKGK+GL+A+KLDMSKAYDRVEW Y+E MM KMGF  RWI LIM 
Subjt:  LCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQ

Query:  CVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEK
        CV +V F VL+NG P   F P RGLRQGDP+SPYLFL+C EGLS ++ +   +  + G+   +  P ++HLF+ADDS++F +AT  ECE V  +LE+YE+
Subjt:  CVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEK

Query:  AYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCF
          GQ +N DK++   S NT +++ +  K +      +   +YLGLP    R KK+ FN  KD+V + + GWKG   S AGRE+LIKAVAQ+ P Y M+ F
Subjt:  AYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCF

Query:  KFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSYTW
        K   SL  ELNSM   FWWG    E+++ W SWK LC  K  GGMGF+DL  FN A+LAKQ WR+ ++P+SL  RVLK +YF +S F++A LG  PSY W
Subjt:  KFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKANLGSNPSYTW

Query:  RSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANR--NAQNYTVAQLLDQDR-TWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWDL
        RSI+  +++ K+G RW +G+G  +E     W+P   A+  ++  R  + Q   VA L+ Q+R  WK  LV+  FI  +A +IL+IP+   +  D ++W  
Subjt:  RSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANR--NAQNYTVAQLLDQDR-TWKEDLVRDLFIEKDAVDILNIPIDRHSREDEIIWDL

Query:  DPKGIFSVRSAYRLA
         P G F+V+SAYR A
Subjt:  DPKGIFSVRSAYRLA

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein4.3e-3523.42Show/hide
Query:  MPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWD---------------------------VVSDPKTLRD------FRPISLC
        +PR ++ ++   L  P T  EI  ++  +   K+PGPDG  A FYQ+Y +                           ++  PK  RD      FRPISL 
Subjt:  MPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWD---------------------------VVSDPKTLRD------FRPISLC

Query:  SVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCV
        ++  KI++K+LANR+++ +  +I   Q  F+PG     N       I  + N+ K K+ ++ + +D  KA+D+++  ++ + ++K+G    ++ +I    
Subjt:  SVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCV

Query:  RTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAY
              ++LNG     F  K G RQG PLSP LF I  E L+R + Q   ++ + G+++ K    L+   +ADD +++ +      +++  ++  + K  
Subjt:  RTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAY

Query:  GQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIF-NNFK---DRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS
        G  IN  KS      N N     ++   L         +YLG+  Q  R+ K++F  N+K     + +    WK    S  GR  ++K        Y  +
Subjt:  GQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIF-NNFK---DRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMS

Query:  CFKFSVSLT--NELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQ-GGMGFRDLTIFNQAMLAKQSWRILRSPD-SLLTRVLKGRYFPSSHFLKANLGS
             + +T   EL     +F W    +      R  K +   K + GG+   D  ++ +A + K +W   ++ D     R       P  H     +  
Subjt:  CFKFSVSLT--NELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQ-GGMGFRDLTIFNQAMLAKQSWRILRSPD-SLLTRVLKGRYFPSSHFLKANLGS

Query:  NPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWI-PREGATTPIVANRNAQNYTVAQLLDQDRTWKEDL---VRDLFIEKD
         P    ++  WG+D     + W     +  +   DP++ P     +  + + N +  T+       +T +E+L   ++D+ + KD
Subjt:  NPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWI-PREGATTPIVANRNAQNYTVAQLLDQDRTWKEDL---VRDLFIEKD

P0C2F6 Putative ribonuclease H protein At1g657502.3e-2830.18Show/hide
Query:  LPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGG
        +P    R  K+ F    +RV   + GW+    S AGR  L KAV  S+P ++MS      S+ N L+ +   F WGS   +++ H   W K+C  K +GG
Subjt:  LPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGG

Query:  MGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRY----FPSSHFLKANLGSNPSYTWRSILWG-RDLFKKGYRWRIGNGLQVEAATDPWIPREGATT
        +G R     N+A+++K  WR+L+  +SL T VL+ +Y       S +L      + S TWRSI  G RD+   G  W  G+G Q+   TD W+    +  
Subjt:  MGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRY----FPSSHFLKANLGSNPSYTWRSILWG-RDLFKKGYRWRIGNGLQVEAATDPWIPREGATT

Query:  PIVANRNAQNYT------VAQLLDQDRTWKEDLVRDLFIEKDAVDILNIPIDR-HSREDEIIWDLDPKGIFSVRSAYRLATNSNV
        P++   N +  T         L    R W    +         +++  + +D      D + W     G FSVRSAY + T   V
Subjt:  PIVANRNAQNYT------VAQLLDQDRTWKEDLVRDLFIEKDAVDILNIPIDR-HSREDEIIWDLDPKGIFSVRSAYRLATNSNV

P11369 LINE-1 retrotransposable element ORF2 protein7.8e-3725.81Show/hide
Query:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV---------------------------------SDPKTLRDFRPISLCSVLY
        ++ DQ   L SP + +EI  V+  +   K+PGPDG  A FYQ + + +                                  DP  + +FRPISL ++  
Subjt:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV---------------------------------SDPKTLRDFRPISLCSVLY

Query:  KIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVR
        KI++K+LANR++  + +II P Q  F+PG     N       IH + NK K K+ ++ + LD  KA+D+++  ++ +++++ G    ++++I        
Subjt:  KIVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVR

Query:  FQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTI
          + +NG        K G RQG PLSPYLF I  E L+R + Q   Q+ + G++I K    ++ L  ADD +++          +  ++  + +  G  I
Subjt:  FQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTI

Query:  NYDKS-NFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEI----FNNFKDRVWKALQGWKGCFFSAAGREILIK--AVAQSIPNYAMSC
        N +KS  F+ + N   +  + +++    +   +  +YLG+     +  K++    F + K  + + L+ WK    S  GR  ++K   + ++I  +    
Subjt:  NYDKS-NFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEI----FNNFKDRVWKALQGWKGCFFSAAGREILIK--AVAQSIPNYAMSC

Query:  FKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSW
         K      NEL     +F W + +       R  K L   K T GG+   DL ++ +A++ K +W
Subjt:  FKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSW

P14381 Transposon TX1 uncharacterized 149 kDa protein1.6e-2925.79Show/hide
Query:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRPISLCSVLYK
        +S+ +  +L +P T +E+   ++ M   K+PG DG+   F+Q +WD +                                 D + ++++RP+SL S  YK
Subjt:  ISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVV--------------------------------SDPKTLRDFRPISLCSVLYK

Query:  IVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVRF
        IV+K ++ RLK VL  +I P QS  VPGR I DN  +  + +H  R  R G   L  L LD  KA+DRV+  Y+   +    F  +++  +     +   
Subjt:  IVSKVLANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVRF

Query:  QVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTIN
         V +N + +      RG+RQG PLS  L+ +  E    LL     ++ +TGL + +    +    YADD +L  +    + E  +   E+Y  A    IN
Subjt:  QVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTIN

Query:  YDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGL-PSQNARNKKEIFNNFKDRVWKALQGWKGC--FFSAAGREILIKAVAQSIPNYAMSCFKFSV
        + KS+ +   +   D +        +++   + +YLG+  S       + F   ++ V   L  WKG     S  GR ++I  +  S   Y + C   + 
Subjt:  YDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGL-PSQNARNKKEIFNNFKDRVWKALQGWKGC--FFSAAGREILIKAVAQSIPNYAMSCFKFSV

Query:  SLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMG
            ++      F W  G+     HW S     +   +GG G
Subjt:  SLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMG

P93295 Uncharacterized mitochondrial protein AtMg003101.0e-3647.37Show/hide
Query:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLK
        ++P YAMSCF+ S  L  +L S    FWW S E++R+I W +W+KLC  K   GG+GFRDL  FNQA+LAKQS+RI+  P +LL+R+L+ RYFP S  ++
Subjt:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLK

Query:  ANLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI
         ++G+ PSY WRSI+ GR+L  +G    IG+G+  +   D WI  E    P+
Subjt:  ANLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI

Arabidopsis top hitse value%identityAlignment
AT3G24255.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.4e-1227.69Show/hide
Query:  QYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK
        +YLGLP    +     +    +++   +  W     S AGR  LI +V  S+ N+ MS F+   +   E++S+C+ F W   E   +    +W  +C  K
Subjt:  QYLGLPSQNARNKKEIFNNFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK

Query:  TQGGMGFRDLTIFNQAMLAKQSWRILRSP---DSLLTRVLKGRYFPSSHFLKANL--GSNPSY---TWRSILWGRDLFKKGYRWRIGNGLQVEAA
         +GG+G R L   N+       W I  +      +  ++LK R   +S F+K ++  GSN S+    W  I  GR +   G+R  I  G+ + A+
Subjt:  TQGGMGFRDLTIFNQAMLAKQSWRILRSP---DSLLTRVLKGRYFPSSHFLKANL--GSNPSY---TWRSILWGRDLFKKGYRWRIGNGLQVEAA

AT4G20520.1 RNA binding;RNA-directed DNA polymerases6.6e-1542.17Show/hide
Query:  LANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWI
        +  RLK ++ ++I P+Q++F+PGR+ TDN +   E +H++R K KG  G + LKLD+ KAYDR+ W Y+E  +   GF   W+
Subjt:  LANRLKRVLNSIISPSQSAFVPGRIITDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWI

AT4G29090.1 Ribonuclease H-like superfamily protein2.3e-3632.76Show/hide
Query:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKA
        ++P Y M+CF    ++  ++ S+ A FWW + +  + +HW++W  L  +K +GG+GF+D+  FN A+L KQ WR+L  P+SL+ +V K RYF  S  L A
Subjt:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLKA

Query:  NLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANR-NAQNYT-------VAQLLDQD-RTWKEDLVRDLFIEKDAVDILN
         LGS PS+ W+SI   +++ ++G R  +GNG  +      W+  + A+  +   R   Q Y        V+ L+D+  R W++D++  LF E +   I  
Subjt:  NLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANR-NAQNYT-------VAQLLDQD-RTWKEDLVRDLFIEKDAVDILN

Query:  IPIDRHSREDEIIWDLDPKGIFSVRSAYRLAT
        +        D   WD    G ++V+S Y + T
Subjt:  IPIDRHSREDEIIWDLDPKGIFSVRSAYRLAT

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein7.2e-3847.37Show/hide
Query:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLK
        ++P YAMSCF+ S  L  +L S    FWW S E++R+I W +W+KLC  K   GG+GFRDL  FNQA+LAKQS+RI+  P +LL+R+L+ RYFP S  ++
Subjt:  SIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHK-TQGGMGFRDLTIFNQAMLAKQSWRILRSPDSLLTRVLKGRYFPSSHFLK

Query:  ANLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI
         ++G+ PSY WRSI+ GR+L  +G    IG+G+  +   D WI  E    P+
Subjt:  ANLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPI

ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)4.2e-1448.53Show/hide
Query:  LLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDS
        ++NG P     P RGLRQGDPLSPYLF++C E LS L  +A  Q  + G+R++ + P + HL +ADD+
Subjt:  LLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLNQAVTQRAVTGLRINKHCPTLTHLFYADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTAAAATTTTGGAGGTGATGCCAAGATGTATATCAGATGATCAGAATTTCAAGTTAGTGTCTCCTTTCACCAGAGAAGAGATCTATGGAGTTGTTAAAAAGATGCA
CCCTACTAAGGCTCCTGGTCCGGATGGGATACAAGCTATATTCTATCAAAAGTATTGGGATGTGGTAAGTGATCCCAAGACTTTGCGTGATTTCCGTCCTATTAGTTTAT
GTTCAGTGCTGTACAAAATAGTATCTAAGGTCTTAGCTAATAGACTGAAACGGGTCCTGAACAGTATTATTTCCCCTAGCCAATCTGCCTTTGTCCCAGGGAGAATCATC
ACTGATAATGCCATCATTGGGTTTGAATGTATCCATGCGGTGAGGAACAAGAGGAAAGGTAAGGATGGTCTGGTGGCCCTAAAATTGGATATGAGTAAGGCCTACGACCG
GGTGGAGTGGGTCTACATTGAGAGAATGATGGATAAAATGGGTTTCAGCAGAAGGTGGATCGATCTTATTATGCAATGTGTCAGAACAGTTAGATTCCAAGTTCTTCTAA
ATGGGAATCCAAGCCCAGAATTTGTCCCCAAAAGGGGTCTCCGGCAAGGGGATCCTCTCTCCCCATATCTGTTCTTGATCTGTGCAGAAGGACTCTCTAGGCTTCTCAAC
CAAGCGGTAACTCAAAGGGCAGTAACAGGTTTGCGTATTAATAAACATTGTCCTACTTTAACTCACCTTTTTTATGCTGACGATAGTTTGTTGTTCTTTAAAGCAACTAA
TACAGAGTGTGAGCACGTAAAATGCATCCTGGAGATATATGAGAAAGCATATGGTCAAACCATTAACTATGATAAATCTAACTTTATGACTAGCCCAAACACTAATGAGG
ATCTTATCCAAAGGGTCAAGGATGTTTTGCAGGTCAACTTCACGGAGAGCTTAGGACAGTACCTTGGTCTACCTTCGCAGAACGCACGTAACAAAAAGGAGATTTTCAAC
AATTTTAAGGATAGAGTTTGGAAAGCGCTACAAGGGTGGAAGGGTTGTTTCTTCTCTGCTGCAGGGAGAGAGATTCTCATTAAAGCAGTGGCCCAGTCCATTCCTAACTA
TGCTATGAGTTGCTTTAAATTTTCTGTTTCTTTAACTAATGAGCTAAATTCTATGTGCGCAAGGTTCTGGTGGGGATCGGGCGAGTCAGAGCGTAGGATCCACTGGAGGA
GCTGGAAAAAGCTGTGTATCCACAAAACGCAAGGAGGAATGGGGTTTAGAGATCTGACCATCTTTAATCAGGCTATGCTAGCAAAACAAAGTTGGAGGATTCTCCGTAGC
CCTGATAGTCTGCTAACAAGGGTGCTGAAAGGCCGTTATTTCCCATCAAGTCACTTTCTAAAGGCGAATCTGGGGAGTAACCCGTCTTACACATGGAGGAGCATCTTGTG
GGGCAGGGATTTGTTCAAGAAGGGTTATAGGTGGCGAATTGGCAACGGTCTCCAAGTGGAAGCAGCAACGGATCCTTGGATCCCTAGGGAAGGTGCTACCACGCCGATTG
TTGCTAATAGGAATGCCCAAAATTACACAGTGGCTCAGCTATTAGATCAAGATCGGACCTGGAAGGAAGATTTGGTTAGAGATTTGTTCATAGAAAAGGATGCGGTGGAT
ATTCTGAATATTCCAATTGATCGCCATAGCAGAGAAGATGAGATAATATGGGACTTGGATCCCAAGGGGATATTCTCGGTTAGAAGCGCTTATAGATTGGCAACCAACTC
CAATGTGCGAATGACCCATCGGGATCAGGGAATGGTTATAAGGAGGCCCTTTGGAAACAATATTGGAAAACTAAAGTCCCTGCGAAGATTAAAAAAGCAAGTTCCTAACA
GAGACACATTACAACAGCAAATTCACAAAATCATTCATACATATCTGGAGGACGAAGGCACTCACAGTCGCACGAGTAGTGGCCGCGCCGATGGGATTCTGAGAACGCAG
AGTGCAGCGACCAGACAGTGGGTCTCAGATCCATCAGAGTTTTGGGTCCTCAACAGTGATGCATCATGGTGTGGTAATATGAATAGTGGAGGCGTCAGGTGGATTCTTCG
TAGGGGAGATGGCTCGCCGGTAACTGCTGGATTTCGACATACCTCTCACCATTGGCCAATCAAATGTTTGGAGGCCCTTGCCGTTGTTGAAGGTCTGAAATCTATCCCTC
CTGCTTCTCCCAAGCTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTGCTTGAGGAGAAGGAAGAGGATCTGTCGGAAGTTGTGATTTTTGTCGAGGAAGCCAAG
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTAAAATTTTGGAGGTGATGCCAAGATGTATATCAGATGATCAGAATTTCAAGTTAGTGTCTCCTTTCACCAGAGAAGAGATCTATGGAGTTGTTAAAAAGATGCA
CCCTACTAAGGCTCCTGGTCCGGATGGGATACAAGCTATATTCTATCAAAAGTATTGGGATGTGGTAAGTGATCCCAAGACTTTGCGTGATTTCCGTCCTATTAGTTTAT
GTTCAGTGCTGTACAAAATAGTATCTAAGGTCTTAGCTAATAGACTGAAACGGGTCCTGAACAGTATTATTTCCCCTAGCCAATCTGCCTTTGTCCCAGGGAGAATCATC
ACTGATAATGCCATCATTGGGTTTGAATGTATCCATGCGGTGAGGAACAAGAGGAAAGGTAAGGATGGTCTGGTGGCCCTAAAATTGGATATGAGTAAGGCCTACGACCG
GGTGGAGTGGGTCTACATTGAGAGAATGATGGATAAAATGGGTTTCAGCAGAAGGTGGATCGATCTTATTATGCAATGTGTCAGAACAGTTAGATTCCAAGTTCTTCTAA
ATGGGAATCCAAGCCCAGAATTTGTCCCCAAAAGGGGTCTCCGGCAAGGGGATCCTCTCTCCCCATATCTGTTCTTGATCTGTGCAGAAGGACTCTCTAGGCTTCTCAAC
CAAGCGGTAACTCAAAGGGCAGTAACAGGTTTGCGTATTAATAAACATTGTCCTACTTTAACTCACCTTTTTTATGCTGACGATAGTTTGTTGTTCTTTAAAGCAACTAA
TACAGAGTGTGAGCACGTAAAATGCATCCTGGAGATATATGAGAAAGCATATGGTCAAACCATTAACTATGATAAATCTAACTTTATGACTAGCCCAAACACTAATGAGG
ATCTTATCCAAAGGGTCAAGGATGTTTTGCAGGTCAACTTCACGGAGAGCTTAGGACAGTACCTTGGTCTACCTTCGCAGAACGCACGTAACAAAAAGGAGATTTTCAAC
AATTTTAAGGATAGAGTTTGGAAAGCGCTACAAGGGTGGAAGGGTTGTTTCTTCTCTGCTGCAGGGAGAGAGATTCTCATTAAAGCAGTGGCCCAGTCCATTCCTAACTA
TGCTATGAGTTGCTTTAAATTTTCTGTTTCTTTAACTAATGAGCTAAATTCTATGTGCGCAAGGTTCTGGTGGGGATCGGGCGAGTCAGAGCGTAGGATCCACTGGAGGA
GCTGGAAAAAGCTGTGTATCCACAAAACGCAAGGAGGAATGGGGTTTAGAGATCTGACCATCTTTAATCAGGCTATGCTAGCAAAACAAAGTTGGAGGATTCTCCGTAGC
CCTGATAGTCTGCTAACAAGGGTGCTGAAAGGCCGTTATTTCCCATCAAGTCACTTTCTAAAGGCGAATCTGGGGAGTAACCCGTCTTACACATGGAGGAGCATCTTGTG
GGGCAGGGATTTGTTCAAGAAGGGTTATAGGTGGCGAATTGGCAACGGTCTCCAAGTGGAAGCAGCAACGGATCCTTGGATCCCTAGGGAAGGTGCTACCACGCCGATTG
TTGCTAATAGGAATGCCCAAAATTACACAGTGGCTCAGCTATTAGATCAAGATCGGACCTGGAAGGAAGATTTGGTTAGAGATTTGTTCATAGAAAAGGATGCGGTGGAT
ATTCTGAATATTCCAATTGATCGCCATAGCAGAGAAGATGAGATAATATGGGACTTGGATCCCAAGGGGATATTCTCGGTTAGAAGCGCTTATAGATTGGCAACCAACTC
CAATGTGCGAATGACCCATCGGGATCAGGGAATGGTTATAAGGAGGCCCTTTGGAAACAATATTGGAAAACTAAAGTCCCTGCGAAGATTAAAAAAGCAAGTTCCTAACA
GAGACACATTACAACAGCAAATTCACAAAATCATTCATACATATCTGGAGGACGAAGGCACTCACAGTCGCACGAGTAGTGGCCGCGCCGATGGGATTCTGAGAACGCAG
AGTGCAGCGACCAGACAGTGGGTCTCAGATCCATCAGAGTTTTGGGTCCTCAACAGTGATGCATCATGGTGTGGTAATATGAATAGTGGAGGCGTCAGGTGGATTCTTCG
TAGGGGAGATGGCTCGCCGGTAACTGCTGGATTTCGACATACCTCTCACCATTGGCCAATCAAATGTTTGGAGGCCCTTGCCGTTGTTGAAGGTCTGAAATCTATCCCTC
CTGCTTCTCCCAAGCTGATTATCGAGCTTGACTCTATTCAGGTGGTACATCTGCTTGAGGAGAAGGAAGAGGATCTGTCGGAAGTTGTGATTTTTGTCGAGGAAGCCAAG
TGA
Protein sequenceShow/hide protein sequence
MPKILEVMPRCISDDQNFKLVSPFTREEIYGVVKKMHPTKAPGPDGIQAIFYQKYWDVVSDPKTLRDFRPISLCSVLYKIVSKVLANRLKRVLNSIISPSQSAFVPGRII
TDNAIIGFECIHAVRNKRKGKDGLVALKLDMSKAYDRVEWVYIERMMDKMGFSRRWIDLIMQCVRTVRFQVLLNGNPSPEFVPKRGLRQGDPLSPYLFLICAEGLSRLLN
QAVTQRAVTGLRINKHCPTLTHLFYADDSLLFFKATNTECEHVKCILEIYEKAYGQTINYDKSNFMTSPNTNEDLIQRVKDVLQVNFTESLGQYLGLPSQNARNKKEIFN
NFKDRVWKALQGWKGCFFSAAGREILIKAVAQSIPNYAMSCFKFSVSLTNELNSMCARFWWGSGESERRIHWRSWKKLCIHKTQGGMGFRDLTIFNQAMLAKQSWRILRS
PDSLLTRVLKGRYFPSSHFLKANLGSNPSYTWRSILWGRDLFKKGYRWRIGNGLQVEAATDPWIPREGATTPIVANRNAQNYTVAQLLDQDRTWKEDLVRDLFIEKDAVD
ILNIPIDRHSREDEIIWDLDPKGIFSVRSAYRLATNSNVRMTHRDQGMVIRRPFGNNIGKLKSLRRLKKQVPNRDTLQQQIHKIIHTYLEDEGTHSRTSSGRADGILRTQ
SAATRQWVSDPSEFWVLNSDASWCGNMNSGGVRWILRRGDGSPVTAGFRHTSHHWPIKCLEALAVVEGLKSIPPASPKLIIELDSIQVVHLLEEKEEDLSEVVIFVEEAK