; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lcy07g006200 (gene) of Sponge gourd (P93075) v1 genome

Gene IDLcy07g006200
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzf-RVT domain-containing protein
Genome locationChr07:32050285..32050827
RNA-Seq ExpressionLcy07g006200
SyntenyLcy07g006200
Gene Ontology termsNA
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABA98898.1 retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group]1.9e-2031.67Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D I W  +  G F+++SAY L + L N  E+S SS    + VW H WK  IP K+KV  W+  ++ LPT  N  KR   ++ +C  C  +PE + H +W 
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPN-DLFAY---DRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDI
        C   R  W  +          Y   + S+W   D+ E I         +D+    ++  W+IW  RNEI H    P  ++
Subjt:  CKLTRGLWVKLYPNPN-DLFAY---DRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDI

KAF4368373.1 hypothetical protein F8388_019090 [Cannabis sativa]2.5e-2035.12Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D + W   P G + VKS YR+G  + NI     S+       WK  W   +PP++K+ GW++ ++ LP +TNL  RGMNVNP C LC  + ET+TH +W 
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHK
        C   + +W KL P       Y R E         I   S  +LD       + + W IW  RN   +K
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]1.9e-2030.59Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D  +W+ + +G ++V+S Y+L M+L+    A+ +S  Y+ + W   WK  +P KIK+  W+  ++ +PT  NL+ RG+   P C +C  + E+I H  + 
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQ
        CK  R +W  L+P    L A D   +       ++W+    +L+  +     I  W IWN RN ++H  Q
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQ

XP_030939716.1 uncharacterized protein LOC115964569 [Quercus lobata]5.6e-2032.14Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTY-KESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIW
        D +IW  + KG+FTVKSA+++   +      +ESS  Y  + +W   WK +IP KI+V GW+  N+ LPT+ NL KR +  + MC++C   PE++ H +W
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTY-KESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIW

Query:  ECKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILH
        EC + R +W         L    +      D  + +      R++  +    ++  W IWN RN ++H
Subjt:  ECKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILH

XP_030943489.1 uncharacterized protein LOC115968280 [Quercus lobata]9.3e-2336.72Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASE-SSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIW
        D+IIW    KG FTVKSAY + + L N ++  E SS   +  +WK  W  KIP KI++ GW+   + LPT  NL KRG+N++ +C  C   PE+ITH + 
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASE-SSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIW

Query:  ECKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKS--QQPNQ
         C+  + +W      P ++     S+W   D   KI    G   D +      ++ W IW  RN+++H+S  Q PNQ
Subjt:  ECKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKS--QQPNQ

TrEMBL top hitse value%identityAlignment
A0A2N9H4E7 Uncharacterized protein1.9e-2131.98Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D++IW   P G +TV SAYR+    + + E   S+   K  +W+  W   +P  IKV  W++ ++ LPT  NL KR +  NP C  C  + ET+ H +WE
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAY---DRSEWTPPDY-----CEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNE
        C   R  W +      +L  Y   D + WT  D+      E+ W                + CW IW YRN+
Subjt:  CKLTRGLWVKLYPNPNDLFAY---DRSEWTPPDY-----CEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNE

A0A6J1DX30 uncharacterized protein LOC1110248749.4e-2130.59Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D  +W+ + +G ++V+S Y+L M+L+    A+ +S  Y+ + W   WK  +P KIK+  W+  ++ +PT  NL+ RG+   P C +C  + E+I H  + 
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQ
        CK  R +W  L+P    L A D   +       ++W+    +L+  +     I  W IWN RN ++H  Q
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQ

A0A7N2KR19 Alpha-aminoacylpeptide hydrolase2.5e-2129.78Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        DE++W +    VF+VKSAY++ + L++   A  S+     + WK  W   +PPK++   W+  +D LPTR NL +R + V+P C LC  + ++  HL+WE
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWV-------KLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQ
        C L R +W        K   +  D+F               +++    RL   +  +  ++ W IWN RN+   +  Q
Subjt:  CKLTRGLWV-------KLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQ

A0A7N2LHE6 zf-RVT domain-containing protein5.5e-2129.05Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D++ WN+    +FTVKSAY++ + +Q  ++A  S       +WK  WK  IPPK++   W+  ++ LPTR NL +R + V P C LC    ET+ H++WE
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDILMK
        C L R +W        ++    R  ++       ++    +R       +   + W IW+ RN+   +  Q + + +M+
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDILMK

A0A7N2N374 zf-RVT domain-containing protein8.5e-2229.05Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D+++WN+     F+V++AY++ + L   S A  S     +  W   W+  IPPK++   W+  +D LPTR NL +R ++++P C +C    ETI H++W+
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDILMK
        C L R +W  +           + + +  D+       S      + +T  M+  W IWN RN +L ++ Q    I++K
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDILMK

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657501.4e-1021.56Show/hide
Query:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE
        D + W     G F+V+SAY + + +  +   + +SF      +   WK ++P ++K   W + N  + T     +R ++ + +C +C+   E++ H++ +
Subjt:  DEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWE

Query:  CKLTRGLWVKLYPNPNDLFAYDRS--EWTPPDYCEKIWNPSGNRLDDDN---NTRGMILCWQIWNYR
        C    G+WV++ P       + +S  EW        +++  G+R   ++   +T   ++ W  W +R
Subjt:  CKLTRGLWVKLYPNPNDLFAYDRS--EWTPPDYCEKIWNPSGNRLDDDN---NTRGMILCWQIWNYR

Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.2e-0526.76Show/hide
Query:  KHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLW----VKLYPNPNDLFAYDRSEWTPPDYCEKIWNPS
        K  W     PK     W    D LPT+T L   GM +   C LC    E   HL   C+    LW    V+L     +L A+    W   D  +  W   
Subjt:  KHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLW----VKLYPNPNDLFAYDRSEWTPPDYCEKIWNPS

Query:  GNRLDDDNNTRGMI--LCWQIWNYRNEILHKSQQPNQDILMK
         NR       + ++  + + IW  RN  LH  +     ++ K
Subjt:  GNRLDDDNNTRGMI--LCWQIWNYRNEILHKSQQPNQDILMK

AT2G02650.1 Ribonuclease H-like superfamily protein2.5e-1025.15Show/hide
Query:  VKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLWVKLYPN
        ++S Y +  +   + E +         V +  WK  + PKIK   W+     L T T L  R ++ +P+C  C  + ETI H+++ C  T+ +W     +
Subjt:  VKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLWVKLYPN

Query:  PNDLFAYDRSEWTPPDYCEKIWN--------PSGNRLDDDNNTRGMILCWQIWNYRNEIL--HKSQQPNQD
         N +     ++W PP   E   N         + N LD         + W++W  RN  L   K Q P+ +
Subjt:  PNDLFAYDRSEWTPPDYCEKIWN--------PSGNRLDDDNNTRGMILCWQIWNYRNEIL--HKSQQPNQD

AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein3.1e-0843.64Show/hide
Query:  WKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWEC
        W  KI PKIK+  WK  N+ LP    L+ R +++ P C  CR   ETITH+++ C
Subjt:  WKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWEC

AT4G10613.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.1e-0540.82Show/hide
Query:  WKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLW
        W    D LPTR  LV  G+ ++P+C LC    ET  HLI  C  +  +W
Subjt:  WKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLW

AT5G16486.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0436.21Show/hide
Query:  KHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWEC
        K  W     PK     W      LPTR  L+  G++V  +C+LC A  ET  HL ++C
Subjt:  KHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWEC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAAATTATTTGGAACAAGGAGCCTAAGGGGGTGTTCACGGTTAAAAGTGCTTATAGGCTGGGGATGTATCTTCAAAACATATCAGAAGCTTCTGAATCGAGTTT
CACGTATAAGGAATCAGTTTGGAAACACTTTTGGAAAACTAAAATTCCTCCAAAAATTAAAGTGTGTGGATGGAAAATCTACAACGATACCCTCCCCACTCGTACTAATT
TAGTTAAGAGAGGAATGAATGTTAACCCAATGTGTGTATTGTGCAGGGCAAAACCGGAGACTATCACCCATCTAATCTGGGAATGCAAGTTAACCAGAGGTTTGTGGGTT
AAGCTCTATCCAAATCCTAATGATCTCTTTGCCTATGACAGATCAGAATGGACACCTCCTGACTACTGCGAGAAGATATGGAATCCAAGCGGGAATCGGTTGGACGACGA
CAACAATACAAGGGGAATGATCTTGTGTTGGCAAATATGGAATTATCGAAATGAAATTCTTCATAAAAGTCAGCAACCCAACCAAGACATACTGATGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGAAATTATTTGGAACAAGGAGCCTAAGGGGGTGTTCACGGTTAAAAGTGCTTATAGGCTGGGGATGTATCTTCAAAACATATCAGAAGCTTCTGAATCGAGTTT
CACGTATAAGGAATCAGTTTGGAAACACTTTTGGAAAACTAAAATTCCTCCAAAAATTAAAGTGTGTGGATGGAAAATCTACAACGATACCCTCCCCACTCGTACTAATT
TAGTTAAGAGAGGAATGAATGTTAACCCAATGTGTGTATTGTGCAGGGCAAAACCGGAGACTATCACCCATCTAATCTGGGAATGCAAGTTAACCAGAGGTTTGTGGGTT
AAGCTCTATCCAAATCCTAATGATCTCTTTGCCTATGACAGATCAGAATGGACACCTCCTGACTACTGCGAGAAGATATGGAATCCAAGCGGGAATCGGTTGGACGACGA
CAACAATACAAGGGGAATGATCTTGTGTTGGCAAATATGGAATTATCGAAATGAAATTCTTCATAAAAGTCAGCAACCCAACCAAGACATACTGATGAAGTAG
Protein sequenceShow/hide protein sequence
MDEIIWNKEPKGVFTVKSAYRLGMYLQNISEASESSFTYKESVWKHFWKTKIPPKIKVCGWKIYNDTLPTRTNLVKRGMNVNPMCVLCRAKPETITHLIWECKLTRGLWV
KLYPNPNDLFAYDRSEWTPPDYCEKIWNPSGNRLDDDNNTRGMILCWQIWNYRNEILHKSQQPNQDILMK